RNA–Protein interactions for RNA: ENST00000636999.1

CACNA1D-220, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 5

Gene CACNA1D, Length 4,212 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-220ENST00000636999 ITM2BQ9Y287 266 aa7.45□□□□□ -1.22
CACNA1D-220ENST00000636999 FAM220BPB1ANY3 271 aa7.45□□□□□ -1.22
CACNA1D-220ENST00000636999 SOCS2O14508 198 aa7.45□□□□□ -1.22
CACNA1D-220ENST00000636999 TRIM24O15164 1050 aa7.45□□□□□ -1.22
CACNA1D-220ENST00000636999 SLC16A5O15375 505 aa7.45□□□□□ -1.22
CACNA1D-220ENST00000636999 SCELO95171 688 aa7.45□□□□□ -1.22
CACNA1D-220ENST00000636999 PENKP01210 267 aaPredicted RBP7.45□□□□□ -1.22
CACNA1D-220ENST00000636999 IL7RP16871 459 aa7.45□□□□□ -1.22
CACNA1D-220ENST00000636999 HNRNPA2B1P22626 353 aaKnown RBP7.45□□□□□ -1.22
CACNA1D-220ENST00000636999 VARSP26640 1264 aaKnown RBP7.45□□□□□ -1.22
CACNA1D-220ENST00000636999 CTHP32929 405 aa7.45□□□□□ -1.22
CACNA1D-220ENST00000636999 ENTPD1P49961 510 aa7.45□□□□□ -1.22
CACNA1D-220ENST00000636999 CASP9P55211 416 aa7.45□□□□□ -1.22
CACNA1D-220ENST00000636999 SPIBQ01892 262 aa7.45□□□□□ -1.22
CACNA1D-220ENST00000636999 SMAD4Q13485 552 aaKnown RBP7.45□□□□□ -1.22
CACNA1D-220ENST00000636999 ELOCQ15369 112 aa7.45□□□□□ -1.22
CACNA1D-220ENST00000636999 ZNHIT3Q15649 155 aaPredicted RBP7.45□□□□□ -1.22
CACNA1D-220ENST00000636999 HSF5Q4G112 596 aaPredicted RBP7.45□□□□□ -1.22
CACNA1D-220ENST00000636999 SPANXN2Q5MJ10 180 aa7.45□□□□□ -1.22
CACNA1D-220ENST00000636999 FAM109BQ6ICB4 259 aaPredicted RBP7.45□□□□□ -1.22
CACNA1D-220ENST00000636999 TYW3Q6IPR3 259 aaKnown RBP7.45□□□□□ -1.22
CACNA1D-220ENST00000636999 SYVN1Q86TM6 617 aa7.45□□□□□ -1.22
CACNA1D-220ENST00000636999 TMEM126BQ8IUX1 230 aa7.45□□□□□ -1.22
CACNA1D-220ENST00000636999 PACRGLQ8N7B6 248 aa7.45□□□□□ -1.22
CACNA1D-220ENST00000636999 POC5Q8NA72 575 aa7.45□□□□□ -1.22
CACNA1D-220ENST00000636999 PTERQ96BW5 349 aa7.45□□□□□ -1.22
CACNA1D-220ENST00000636999 MTERF1Q99551 399 aaKnown RBP7.45□□□□□ -1.22
CACNA1D-220ENST00000636999 VN1R3Q9BXE9 311 aa7.45□□□□□ -1.22
CACNA1D-220ENST00000636999 TPSD1Q9BZJ3 242 aa7.45□□□□□ -1.22
CACNA1D-220ENST00000636999 TRNAU1APQ9NX07 287 aaKnown RBP7.45□□□□□ -1.22
CACNA1D-220ENST00000636999 A0A0U1RQS6 177 aa7.45□□□□□ -1.22
CACNA1D-220ENST00000636999 PLK4O00444 970 aa7.45□□□□□ -1.22
CACNA1D-220ENST00000636999 NME4O00746 187 aa7.45□□□□□ -1.22
CACNA1D-220ENST00000636999 CDH1P12830 882 aa7.45□□□□□ -1.22
CACNA1D-220ENST00000636999 CAPN3P20807 821 aa7.45□□□□□ -1.22
CACNA1D-220ENST00000636999 CD72P21854 359 aa7.45□□□□□ -1.22
CACNA1D-220ENST00000636999 FDXRP22570 491 aa7.45□□□□□ -1.22
CACNA1D-220ENST00000636999 ADRA1AP35348 466 aa7.45□□□□□ -1.22
CACNA1D-220ENST00000636999 NUDT1P36639 197 aa7.45□□□□□ -1.22
CACNA1D-220ENST00000636999 BUD31P41223 144 aaPredicted RBP7.45□□□□□ -1.22
CACNA1D-220ENST00000636999 IL12RB1P42701 662 aa7.45□□□□□ -1.22
CACNA1D-220ENST00000636999 CDK9P50750 372 aaKnown RBP7.45□□□□□ -1.22
CACNA1D-220ENST00000636999 MAPK12P53778 367 aa7.45□□□□□ -1.22
CACNA1D-220ENST00000636999 FOXA1P55317 472 aa7.45□□□□□ -1.22
CACNA1D-220ENST00000636999 GRIN2CQ14957 1233 aa7.45□□□□□ -1.22
CACNA1D-220ENST00000636999 LAPTM4AQ15012 233 aa7.45□□□□□ -1.22
CACNA1D-220ENST00000636999 CARTPTQ16568 116 aa7.45□□□□□ -1.22
CACNA1D-220ENST00000636999 ARMC4Q5T2S8 1044 aa7.45□□□□□ -1.22
CACNA1D-220ENST00000636999 KCTD11Q693B1 232 aa7.45□□□□□ -1.22
CACNA1D-220ENST00000636999 SH2D5Q6ZV89 423 aa7.45□□□□□ -1.22
CACNA1D-220ENST00000636999 CYP2U1Q7Z449 544 aa7.45□□□□□ -1.22
CACNA1D-220ENST00000636999 SLC9B2Q86UD5 537 aa7.45□□□□□ -1.22
CACNA1D-220ENST00000636999 DEFB123Q8N688 67 aa7.45□□□□□ -1.22
CACNA1D-220ENST00000636999 DEFB119Q8N690 84 aa7.45□□□□□ -1.22
CACNA1D-220ENST00000636999 MDGA1Q8NFP4 955 aa7.45□□□□□ -1.22
CACNA1D-220ENST00000636999 TMIGD2Q96BF3 282 aa7.45□□□□□ -1.22
CACNA1D-220ENST00000636999 SLC45A3Q96JT2 553 aa7.45□□□□□ -1.22
CACNA1D-220ENST00000636999 VPS35Q96QK1 796 aa7.45□□□□□ -1.22
CACNA1D-220ENST00000636999 SMURF2Q9HAU4 748 aa7.45□□□□□ -1.22
CACNA1D-220ENST00000636999 CCM2LQ9NUG4 571 aaPredicted RBP7.45□□□□□ -1.22
CACNA1D-220ENST00000636999 ZIM2Q9NZV7 527 aa7.45□□□□□ -1.22
CACNA1D-220ENST00000636999 DNAJB9Q9UBS3 223 aa7.45□□□□□ -1.22
CACNA1D-220ENST00000636999 TEKT2Q9UIF3 430 aa7.45□□□□□ -1.22
CACNA1D-220ENST00000636999 GMEB2Q9UKD1 530 aa7.45□□□□□ -1.22
CACNA1D-220ENST00000636999 VPS4AQ9UN37 437 aa7.45□□□□□ -1.22
CACNA1D-220ENST00000636999 SH3GLB1Q9Y371 365 aa7.45□□□□□ -1.22
CACNA1D-220ENST00000636999 OTOFQ9HC10 1997 aa7.45□□□□□ -1.22
CACNA1D-220ENST00000636999 MUSKO15146 869 aa7.44□□□□□ -1.22
CACNA1D-220ENST00000636999 RPS3P23396 243 aaKnown RBP eCLIP7.44□□□□□ -1.22
CACNA1D-220ENST00000636999 CCR2P41597 374 aa7.44□□□□□ -1.22
CACNA1D-220ENST00000636999 BDKRB1P46663 353 aa7.44□□□□□ -1.22
CACNA1D-220ENST00000636999 CXCL12P48061 93 aa7.44□□□□□ -1.22
CACNA1D-220ENST00000636999 ZNF140P52738 457 aaPredicted RBP7.44□□□□□ -1.22
CACNA1D-220ENST00000636999 MANFP55145 182 aaKnown RBP7.44□□□□□ -1.22
CACNA1D-220ENST00000636999 NFKB2Q00653 900 aa7.44□□□□□ -1.22
CACNA1D-220ENST00000636999 C2orf80Q0P641 193 aa7.44□□□□□ -1.22
CACNA1D-220ENST00000636999 GNA13Q14344 377 aa7.44□□□□□ -1.22
CACNA1D-220ENST00000636999 SLBPQ14493 270 aaKnown RBP eCLIP7.44□□□□□ -1.22
CACNA1D-220ENST00000636999 PTGR1Q14914 329 aa7.44□□□□□ -1.22
CACNA1D-220ENST00000636999 FRG2Q64ET8 278 aa7.44□□□□□ -1.22
CACNA1D-220ENST00000636999 CASP12Q6UXS9 341 aa7.44□□□□□ -1.22
CACNA1D-220ENST00000636999 SLC36A4Q6YBV0 504 aa7.44□□□□□ -1.22
CACNA1D-220ENST00000636999 GOLGA7Q7Z5G4 137 aa7.44□□□□□ -1.22
CACNA1D-220ENST00000636999 THOC6Q86W42 341 aaKnown RBP7.44□□□□□ -1.22
CACNA1D-220ENST00000636999 PARGQ86W56 976 aa7.44□□□□□ -1.22
CACNA1D-220ENST00000636999 AMER2Q8N7J2 671 aa7.44□□□□□ -1.22
CACNA1D-220ENST00000636999 TMEM145Q8NBT3 493 aa7.44□□□□□ -1.22
CACNA1D-220ENST00000636999 GPR26Q8NDV2 337 aa7.44□□□□□ -1.22
CACNA1D-220ENST00000636999 PIK3C3Q8NEB9 887 aa7.44□□□□□ -1.22
CACNA1D-220ENST00000636999 OR52B6Q8NGF0 335 aa7.44□□□□□ -1.22
CACNA1D-220ENST00000636999 WFDC5Q8TCV5 224 aa7.44□□□□□ -1.22
CACNA1D-220ENST00000636999 HCAR2Q8TDS4 363 aa7.44□□□□□ -1.22
CACNA1D-220ENST00000636999 LMX1AQ8TE12 382 aa7.44□□□□□ -1.22
CACNA1D-220ENST00000636999 FRG2BQ96QU4 278 aa7.44□□□□□ -1.22
CACNA1D-220ENST00000636999 MYADMQ96S97 322 aa7.44□□□□□ -1.22
CACNA1D-220ENST00000636999 SLC29A3Q9BZD2 475 aa7.44□□□□□ -1.22
CACNA1D-220ENST00000636999 TMEM245Q9H330 911 aa7.44□□□□□ -1.22
CACNA1D-220ENST00000636999 RMI1Q9H9A7 625 aa7.44□□□□□ -1.22
CACNA1D-220ENST00000636999 TREX1Q9NSU2 369 aa7.44□□□□□ -1.22
CACNA1D-220ENST00000636999 MARK1Q9P0L2 795 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms