RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 FGFBP2Q9BYJ0 223 aa17.37■□□□□ 0.37
CACNA1A-227ENST00000636549 TDP1Q9NUW8 608 aa17.37■□□□□ 0.37
CACNA1A-227ENST00000636549 CNTN3Q9P232 1028 aa17.37■□□□□ 0.37
CACNA1A-227ENST00000636549 TCAF1Q9Y4C2 921 aa17.37■□□□□ 0.37
CACNA1A-227ENST00000636549 BCKDHAP12694 445 aa17.37■□□□□ 0.37
CACNA1A-227ENST00000636549 PTPRCAPQ14761 206 aa17.37■□□□□ 0.37
CACNA1A-227ENST00000636549 LRRTM4Q86VH4 590 aa17.37■□□□□ 0.37
CACNA1A-227ENST00000636549 DCAKDQ8WVC6 231 aa17.37■□□□□ 0.37
CACNA1A-227ENST00000636549 KCTD13Q8WZ19 329 aa17.37■□□□□ 0.37
CACNA1A-227ENST00000636549 LPGAT1Q92604 370 aa17.37■□□□□ 0.37
CACNA1A-227ENST00000636549 LRMDAQ9H2I8 198 aa17.37■□□□□ 0.37
CACNA1A-227ENST00000636549 SUV39H2Q9H5I1 410 aa17.37■□□□□ 0.37
CACNA1A-227ENST00000636549 INSL6Q9Y581 213 aa17.37■□□□□ 0.37
CACNA1A-227ENST00000636549 B3GALT1Q9Y5Z6 326 aa17.37■□□□□ 0.37
CACNA1A-227ENST00000636549 FABP12A6NFH5 140 aa17.36■□□□□ 0.37
CACNA1A-227ENST00000636549 APOL3O95236 402 aa17.36■□□□□ 0.37
CACNA1A-227ENST00000636549 GNB3P16520 340 aa17.36■□□□□ 0.37
CACNA1A-227ENST00000636549 BLMHQ13867 455 aa17.36■□□□□ 0.37
CACNA1A-227ENST00000636549 INO80EQ8NBZ0 244 aaPredicted RBP17.36■□□□□ 0.37
CACNA1A-227ENST00000636549 FZD4Q9ULV1 537 aa17.36■□□□□ 0.37
CACNA1A-227ENST00000636549 ANKRD34BA5PLL1 514 aa17.36■□□□□ 0.37
CACNA1A-227ENST00000636549 TIGD5Q53EQ6 642 aa17.36■□□□□ 0.37
CACNA1A-227ENST00000636549 RAB12Q6IQ22 244 aa17.36■□□□□ 0.37
CACNA1A-227ENST00000636549 OR10T2Q8NGX3 314 aa17.36■□□□□ 0.37
CACNA1A-227ENST00000636549 DUSP26Q9BV47 211 aa17.36■□□□□ 0.37
CACNA1A-227ENST00000636549 NUFIP1Q9UHK0 495 aaKnown RBP17.36■□□□□ 0.37
CACNA1A-227ENST00000636549 PAK4O96013 591 aaPredicted RBP17.36■□□□□ 0.37
CACNA1A-227ENST00000636549 SERPINA6P08185 405 aa17.36■□□□□ 0.37
CACNA1A-227ENST00000636549 SMAD2Q15796 467 aaKnown RBP17.36■□□□□ 0.37
CACNA1A-227ENST00000636549 BPIFB1Q8TDL5 484 aa17.36■□□□□ 0.37
CACNA1A-227ENST00000636549 AP1S3Q96PC3 154 aa17.36■□□□□ 0.37
CACNA1A-227ENST00000636549 RBM4BQ9BQ04 359 aaKnown RBP17.36■□□□□ 0.37
CACNA1A-227ENST00000636549 RBM4Q9BWF3 364 aaKnown RBP17.36■□□□□ 0.37
CACNA1A-227ENST00000636549 HPSEQ9Y251 543 aa17.36■□□□□ 0.37
CACNA1A-227ENST00000636549 ADAM18Q9Y3Q7 739 aa17.36■□□□□ 0.37
CACNA1A-227ENST00000636549 FADS3Q9Y5Q0 445 aa17.36■□□□□ 0.37
CACNA1A-227ENST00000636549 CAPN8A6NHC0 703 aa17.36■□□□□ 0.37
CACNA1A-227ENST00000636549 LTC4SQ16873 150 aa17.36■□□□□ 0.37
CACNA1A-227ENST00000636549 C3orf38Q5JPI3 329 aa17.36■□□□□ 0.37
CACNA1A-227ENST00000636549 FAM180BQ6P0A1 224 aa17.36■□□□□ 0.37
CACNA1A-227ENST00000636549 SPRYD4Q8WW59 207 aaPredicted RBP17.36■□□□□ 0.37
CACNA1A-227ENST00000636549 FAM221BA6H8Z2 402 aa17.36■□□□□ 0.37
CACNA1A-227ENST00000636549 J3KR12 359 aa17.36■□□□□ 0.37
CACNA1A-227ENST00000636549 F10P00742 488 aa17.36■□□□□ 0.37
CACNA1A-227ENST00000636549 EDNRBP24530 442 aa17.36■□□□□ 0.37
CACNA1A-227ENST00000636549 PAPOLGQ9BWT3 736 aaKnown RBP17.36■□□□□ 0.37
CACNA1A-227ENST00000636549 ZBTB20Q9HC78 741 aaPredicted RBP17.36■□□□□ 0.37
CACNA1A-227ENST00000636549 MEMO1Q9Y316 297 aa17.36■□□□□ 0.37
CACNA1A-227ENST00000636549 NOP16Q9Y3C1 178 aaKnown RBP17.36■□□□□ 0.37
CACNA1A-227ENST00000636549 HCRTR2O43614 444 aa17.36■□□□□ 0.37
CACNA1A-227ENST00000636549 HOXB8P17481 243 aaPredicted RBP17.36■□□□□ 0.37
CACNA1A-227ENST00000636549 RFTN2Q52LD8 501 aaPredicted RBP17.36■□□□□ 0.37
CACNA1A-227ENST00000636549 TARBP1Q13395 1621 aaKnown RBP17.35■□□□□ 0.37
CACNA1A-227ENST00000636549 SLC39A4Q6P5W5 647 aa17.35■□□□□ 0.37
CACNA1A-227ENST00000636549 HACD2Q6Y1H2 254 aa17.35■□□□□ 0.37
CACNA1A-227ENST00000636549 SLC26A9Q7LBE3 791 aa17.35■□□□□ 0.37
CACNA1A-227ENST00000636549 CCDC36Q8IYA8 594 aa17.35■□□□□ 0.37
CACNA1A-227ENST00000636549 CELF5Q8N6W0 485 aaKnown RBP17.35■□□□□ 0.37
CACNA1A-227ENST00000636549 CEP76Q8TAP6 659 aa17.35■□□□□ 0.37
CACNA1A-227ENST00000636549 SGCZQ96LD1 299 aa17.35■□□□□ 0.37
CACNA1A-227ENST00000636549 PIP5K1AQ99755 562 aa17.35■□□□□ 0.37
CACNA1A-227ENST00000636549 OR51B5Q9H339 312 aa17.35■□□□□ 0.37
CACNA1A-227ENST00000636549 KCNK13Q9HB14 408 aa17.35■□□□□ 0.37
CACNA1A-227ENST00000636549 CNTN5O94779 1100 aa17.35■□□□□ 0.37
CACNA1A-227ENST00000636549 EPHA1P21709 976 aa17.35■□□□□ 0.37
CACNA1A-227ENST00000636549 ADAM17P78536 824 aa17.35■□□□□ 0.37
CACNA1A-227ENST00000636549 SH3D19Q5HYK7 790 aa17.35■□□□□ 0.37
CACNA1A-227ENST00000636549 LSM1O15116 133 aaKnown RBP17.35■□□□□ 0.37
CACNA1A-227ENST00000636549 GJA5P36382 358 aa17.35■□□□□ 0.37
CACNA1A-227ENST00000636549 NUDT6P53370 316 aa17.35■□□□□ 0.37
CACNA1A-227ENST00000636549 RPS13P62277 151 aaKnown RBP17.35■□□□□ 0.37
CACNA1A-227ENST00000636549 ANKRD22Q5VYY1 191 aa17.35■□□□□ 0.37
CACNA1A-227ENST00000636549 ZNF776Q68DI1 518 aaPredicted RBP17.35■□□□□ 0.37
CACNA1A-227ENST00000636549 FIGNL1Q6PIW4 674 aa17.35■□□□□ 0.37
CACNA1A-227ENST00000636549 FRMD7Q6ZUT3 714 aa17.35■□□□□ 0.37
CACNA1A-227ENST00000636549 MON1BQ7L1V2 547 aa17.35■□□□□ 0.37
CACNA1A-227ENST00000636549 C12orf40Q86WS4 652 aa17.35■□□□□ 0.37
CACNA1A-227ENST00000636549 FAM71AQ8IYT1 594 aa17.35■□□□□ 0.37
CACNA1A-227ENST00000636549 OR6N2Q8NGY6 317 aa17.35■□□□□ 0.37
CACNA1A-227ENST00000636549 M0R129 80 aa17.35■□□□□ 0.37
CACNA1A-227ENST00000636549 FNTBP49356 437 aa17.35■□□□□ 0.37
CACNA1A-227ENST00000636549 OR4F3Q6IEY1 312 aa17.35■□□□□ 0.37
CACNA1A-227ENST00000636549 SH3RF1Q7Z6J0 888 aa17.35■□□□□ 0.37
CACNA1A-227ENST00000636549 ZNF709Q8N972 641 aa17.35■□□□□ 0.37
CACNA1A-227ENST00000636549 SPOCK2Q92563 424 aa17.35■□□□□ 0.37
CACNA1A-227ENST00000636549 IL20RAQ9UHF4 553 aa17.35■□□□□ 0.37
CACNA1A-227ENST00000636549 NCANO14594 1321 aa17.35■□□□□ 0.37
CACNA1A-227ENST00000636549 A0A1W2PQ45 241 aaPredicted RBP17.35■□□□□ 0.37
CACNA1A-227ENST00000636549 A0A1W2PQY0 241 aa17.35■□□□□ 0.37
CACNA1A-227ENST00000636549 ARPC2O15144 300 aa17.35■□□□□ 0.37
CACNA1A-227ENST00000636549 POP7O75817 140 aaKnown RBP17.35■□□□□ 0.37
CACNA1A-227ENST00000636549 CD79AP11912 226 aa17.35■□□□□ 0.37
CACNA1A-227ENST00000636549 CPT1BQ92523 772 aa17.35■□□□□ 0.37
CACNA1A-227ENST00000636549 CCM2Q9BSQ5 444 aa17.35■□□□□ 0.37
CACNA1A-227ENST00000636549 MRPL15Q9P015 296 aaKnown RBP17.35■□□□□ 0.37
CACNA1A-227ENST00000636549 RPH3ALQ9UNE2 315 aa17.35■□□□□ 0.37
CACNA1A-227ENST00000636549 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.34■□□□□ 0.37
CACNA1A-227ENST00000636549 COL6A2P12110 1019 aa17.34■□□□□ 0.37
CACNA1A-227ENST00000636549 CDH1P12830 882 aa17.34■□□□□ 0.37
CACNA1A-227ENST00000636549 ITIH1P19827 911 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms