RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 ELMSAN1Q6PJG2 1045 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 ZNF621Q6ZSS3 439 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 EIF3MQ7L2H7 374 aaKnown RBP7.8□□□□□ -1.16
GPC3-204ENST00000631057 GPR155Q7Z3F1 870 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 HSD11B1LQ7Z5J1 315 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 TMEM25Q86YD3 366 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 RAVER1Q8IY67 606 aaKnown RBP7.8□□□□□ -1.16
GPC3-204ENST00000631057 KREMEN2Q8NCW0 462 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 OR2A12Q8NGT7 310 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 WDR20Q8TBZ3 569 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 FRS2Q8WU20 508 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 TMEM159Q96B96 161 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 HSPBAP1Q96EW2 488 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 EGLN2Q96KS0 407 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 SPACA7Q96KW9 195 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 APOL4Q9BPW4 351 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 CORO1BQ9BR76 489 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 BBS2Q9BXC9 721 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 EBPLQ9BY08 206 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 RNF208Q9H0X6 261 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 RIBC2Q9H4K1 309 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 WARS2Q9UGM6 360 aaKnown RBP7.8□□□□□ -1.16
GPC3-204ENST00000631057 SLCO3A1Q9UIG8 710 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 BTNL2Q9UIR0 455 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 MBD1Q9UIS9 605 aaPredicted RBP7.8□□□□□ -1.16
GPC3-204ENST00000631057 TPRKBQ9Y3C4 175 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 PCDHB11Q9Y5F2 797 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 U3KQV3 271 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 NOTCH4Q99466 2003 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 BRCA2P51587 3418 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 ALPK3Q96L96 1907 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 MYO1GB0I1T2 1018 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 TMX2-CTNND1H3BSU7 103 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 SGTAO43765 313 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 DPM1O60762 260 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 MRPS14O60783 128 aaKnown RBP7.8□□□□□ -1.16
GPC3-204ENST00000631057 SCN2BO60939 215 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 ATG13O75143 517 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 CLPXO76031 633 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 FGF18O76093 207 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 DKK1O94907 266 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 KCNK5O95279 499 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 CPSF4O95639 269 aaKnown RBP7.8□□□□□ -1.16
GPC3-204ENST00000631057 ANGPTL1O95841 491 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 B3GALT4O96024 378 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 INHBBP09529 407 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 CCL5P13501 91 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 ZNF12P17014 697 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 ZNF182P17025 639 aaPredicted RBP7.8□□□□□ -1.16
GPC3-204ENST00000631057 JUNDP17535 347 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 POLR2EP19388 210 aaKnown RBP7.8□□□□□ -1.16
GPC3-204ENST00000631057 CD22P20273 847 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 AGXTP21549 392 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 XPAP23025 273 aaPredicted RBP7.8□□□□□ -1.16
GPC3-204ENST00000631057 KDELR2P33947 212 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 NNMTP40261 264 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 RXRGP48443 463 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 ITGA1P56199 1179 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 WNT3P56703 355 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 CXCR4P61073 352 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 PPP1R8Q12972 351 aaKnown RBP7.8□□□□□ -1.16
GPC3-204ENST00000631057 BNIP3Q12983 259 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 CDK5R2Q13319 367 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 NAE1Q13564 534 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 RAPSNQ13702 412 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 DDX39BQ13838 428 aaKnown RBP7.8□□□□□ -1.16
GPC3-204ENST00000631057 NUMA1Q14980 2115 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 ARHGAP15Q53QZ3 475 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 SPIN4Q56A73 249 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 HENMT1Q5T8I9 393 aaKnown RBP7.8□□□□□ -1.16
GPC3-204ENST00000631057 CPTPQ5TA50 214 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 ANKRD34AQ69YU3 496 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 KDM4DQ6B0I6 523 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 LAIR2Q6ISS4 152 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 CAPN13Q6MZZ7 669 aaPredicted RBP7.8□□□□□ -1.16
GPC3-204ENST00000631057 LILRA6Q6PI73 481 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 AGTRAPQ6RW13 159 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 Q6ZNX1 250 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 Q6ZVL8 140 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 CBLL1Q75N03 491 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 DPPA4Q7L190 304 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 ZNF551Q7Z340 670 aaPredicted RBP7.8□□□□□ -1.16
GPC3-204ENST00000631057 PIWIL3Q7Z3Z3 882 aaKnown RBP7.8□□□□□ -1.16
GPC3-204ENST00000631057 CAMKMTQ7Z624 323 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 TMCO2Q7Z6W1 182 aaPredicted RBP7.8□□□□□ -1.16
GPC3-204ENST00000631057 PTOV1Q86YD1 416 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 ANKRD13BQ86YJ7 626 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 ZC3H7AQ8IWR0 971 aaKnown RBP7.8□□□□□ -1.16
GPC3-204ENST00000631057 SYNPOQ8N3V7 929 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 VPS37AQ8NEZ2 397 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 CDC26Q8NHZ8 85 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 SGCDQ92629 289 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 IRF7Q92985 503 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 SCAMP4Q969E2 229 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 ABTB1Q969K4 478 aaPredicted RBP7.8□□□□□ -1.16
GPC3-204ENST00000631057 VWCEQ96DN2 955 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 PLEKHA8Q96JA3 519 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 FOPNLQ96NB1 174 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 VPS35Q96QK1 796 aa7.8□□□□□ -1.16
GPC3-204ENST00000631057 YME1L1Q96TA2 773 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms