RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 SCAMP2O15127 329 aaKnown RBP19.01■□□□□ 0.63
PCDHB11-202ENST00000624887 MID1O15344 667 aa19.01■□□□□ 0.63
PCDHB11-202ENST00000624887 GNAO1P09471 354 aa19.01■□□□□ 0.63
PCDHB11-202ENST00000624887 ANXA4P09525 319 aaPredicted RBP19.01■□□□□ 0.63
PCDHB11-202ENST00000624887 ATP6V1B1P15313 513 aa19.01■□□□□ 0.63
PCDHB11-202ENST00000624887 TAS2R38P59533 333 aa19.01■□□□□ 0.63
PCDHB11-202ENST00000624887 TSTA3Q13630 321 aaPredicted RBP19.01■□□□□ 0.63
PCDHB11-202ENST00000624887 ENPP2Q13822 863 aa19.01■□□□□ 0.63
PCDHB11-202ENST00000624887 SLBPQ14493 270 aaKnown RBP eCLIP19.01■□□□□ 0.63
PCDHB11-202ENST00000624887 PAGE2BQ5JRK9 111 aa19.01■□□□□ 0.63
PCDHB11-202ENST00000624887 AGBL4Q5VU57 503 aa19.01■□□□□ 0.63
PCDHB11-202ENST00000624887 TBPL2Q6SJ96 375 aa19.01■□□□□ 0.63
PCDHB11-202ENST00000624887 TMEM184AQ6ZMB5 413 aa19.01■□□□□ 0.63
PCDHB11-202ENST00000624887 FKBP9P1Q75LS8 142 aa19.01■□□□□ 0.63
PCDHB11-202ENST00000624887 PDZD3Q86UT5 571 aa19.01■□□□□ 0.63
PCDHB11-202ENST00000624887 AMZ2Q86W34 360 aa19.01■□□□□ 0.63
PCDHB11-202ENST00000624887 NCLNQ969V3 563 aa19.01■□□□□ 0.63
PCDHB11-202ENST00000624887 RMND5BQ96G75 393 aaPredicted RBP19.01■□□□□ 0.63
PCDHB11-202ENST00000624887 MAGIXQ9H6Y5 334 aa19.01■□□□□ 0.63
PCDHB11-202ENST00000624887 CCDC177Q9NQR7 707 aaPredicted RBP19.01■□□□□ 0.63
PCDHB11-202ENST00000624887 PRKD3O94806 890 aa19.01■□□□□ 0.63
PCDHB11-202ENST00000624887 APODP05090 189 aa19.01■□□□□ 0.63
PCDHB11-202ENST00000624887 PCCBP05166 539 aa19.01■□□□□ 0.63
PCDHB11-202ENST00000624887 MYCLP1P12525 358 aaPredicted RBP19.01■□□□□ 0.63
PCDHB11-202ENST00000624887 MTHFRP42898 656 aa19.01■□□□□ 0.63
PCDHB11-202ENST00000624887 CDK3Q00526 305 aa19.01■□□□□ 0.63
PCDHB11-202ENST00000624887 SLC14A1Q13336 389 aa19.01■□□□□ 0.63
PCDHB11-202ENST00000624887 ADRM1Q16186 407 aa19.01■□□□□ 0.63
PCDHB11-202ENST00000624887 CNPY1Q3B7I2 92 aa19.01■□□□□ 0.63
PCDHB11-202ENST00000624887 TMEM214Q6NUQ4 689 aaKnown RBP19.01■□□□□ 0.63
PCDHB11-202ENST00000624887 GALNT18Q6P9A2 607 aa19.01■□□□□ 0.63
PCDHB11-202ENST00000624887 NUDT18Q6ZVK8 323 aa19.01■□□□□ 0.63
PCDHB11-202ENST00000624887 ZNF551Q7Z340 670 aaPredicted RBP19.01■□□□□ 0.63
PCDHB11-202ENST00000624887 CAMKMTQ7Z624 323 aa19.01■□□□□ 0.63
PCDHB11-202ENST00000624887 METTL25Q8N6Q8 603 aa19.01■□□□□ 0.63
PCDHB11-202ENST00000624887 TSPAN14Q8NG11 270 aa19.01■□□□□ 0.63
PCDHB11-202ENST00000624887 CDC26Q8NHZ8 85 aa19.01■□□□□ 0.63
PCDHB11-202ENST00000624887 NETO1Q8TDF5 533 aa19.01■□□□□ 0.63
PCDHB11-202ENST00000624887 SETD7Q8WTS6 366 aaKnown RBP19.01■□□□□ 0.63
PCDHB11-202ENST00000624887 SLC5A11Q8WWX8 675 aa19.01■□□□□ 0.63
PCDHB11-202ENST00000624887 TMBIM1Q969X1 311 aa19.01■□□□□ 0.63
PCDHB11-202ENST00000624887 MYADMQ96S97 322 aa19.01■□□□□ 0.63
PCDHB11-202ENST00000624887 RSPH9Q9H1X1 276 aaPredicted RBP19.01■□□□□ 0.63
PCDHB11-202ENST00000624887 CAAP1Q9H8G2 361 aa19.01■□□□□ 0.63
PCDHB11-202ENST00000624887 ETAA1Q9NY74 926 aa19.01■□□□□ 0.63
PCDHB11-202ENST00000624887 ASF1AQ9Y294 204 aa19.01■□□□□ 0.63
PCDHB11-202ENST00000624887 PRKAB1Q9Y478 270 aa19.01■□□□□ 0.63
PCDHB11-202ENST00000624887 A0A1B0GTW7 788 aa19■□□□□ 0.63
PCDHB11-202ENST00000624887 PIPSLA2A3N6 862 aa19■□□□□ 0.63
PCDHB11-202ENST00000624887 CLIC1O00299 241 aa19■□□□□ 0.63
PCDHB11-202ENST00000624887 SH3BGRLO75368 114 aa19■□□□□ 0.63
PCDHB11-202ENST00000624887 LAMP1P11279 417 aa19■□□□□ 0.63
PCDHB11-202ENST00000624887 HOXB6P17509 224 aaKnown RBP19■□□□□ 0.63
PCDHB11-202ENST00000624887 NELFEP18615 380 aaKnown RBP19■□□□□ 0.63
PCDHB11-202ENST00000624887 TIA1P31483 386 aaKnown RBP eCLIP19■□□□□ 0.63
PCDHB11-202ENST00000624887 CAPGP40121 348 aa19■□□□□ 0.63
PCDHB11-202ENST00000624887 CST6Q15828 149 aa19■□□□□ 0.63
PCDHB11-202ENST00000624887 HIST2H2ACQ16777 129 aaPredicted RBP19■□□□□ 0.63
PCDHB11-202ENST00000624887 WSCD2Q2TBF2 565 aa19■□□□□ 0.63
PCDHB11-202ENST00000624887 CYBRD1Q53TN4 286 aa19■□□□□ 0.63
PCDHB11-202ENST00000624887 HIST2H2AA3Q6FI13 130 aa19■□□□□ 0.63
PCDHB11-202ENST00000624887 NXPE4Q6UWF7 544 aa19■□□□□ 0.63
PCDHB11-202ENST00000624887 DHRSXQ8N5I4 330 aa19■□□□□ 0.63
PCDHB11-202ENST00000624887 LMNTD1Q8N9Z9 388 aa19■□□□□ 0.63
PCDHB11-202ENST00000624887 RAD51AP1Q96B01 352 aa19■□□□□ 0.63
PCDHB11-202ENST00000624887 KXD1Q9BQD3 176 aa19■□□□□ 0.63
PCDHB11-202ENST00000624887 DUSP26Q9BV47 211 aa19■□□□□ 0.63
PCDHB11-202ENST00000624887 SIRT5Q9NXA8 310 aa19■□□□□ 0.63
PCDHB11-202ENST00000624887 DNAJB9Q9UBS3 223 aa19■□□□□ 0.63
PCDHB11-202ENST00000624887 ERVK-11Q9UQG0 969 aa19■□□□□ 0.63
PCDHB11-202ENST00000624887 BTBD3Q9Y2F9 522 aa19■□□□□ 0.63
PCDHB11-202ENST00000624887 TRPM6Q9BX84 2022 aa18.99■□□□□ 0.63
PCDHB11-202ENST00000624887 GABRR3A8MPY1 467 aa18.99■□□□□ 0.63
PCDHB11-202ENST00000624887 YY2O15391 372 aa18.99■□□□□ 0.63
PCDHB11-202ENST00000624887 PI15O43692 258 aa18.99■□□□□ 0.63
PCDHB11-202ENST00000624887 EPN2O95208 641 aa18.99■□□□□ 0.63
PCDHB11-202ENST00000624887 SERPINA1P01009 418 aa18.99■□□□□ 0.63
PCDHB11-202ENST00000624887 GPX2P18283 190 aa18.99■□□□□ 0.63
PCDHB11-202ENST00000624887 WASP42768 502 aa18.99■□□□□ 0.63
PCDHB11-202ENST00000624887 NR1H2P55055 460 aa18.99■□□□□ 0.63
PCDHB11-202ENST00000624887 CAMK2GQ13555 558 aaPredicted RBP18.99■□□□□ 0.63
PCDHB11-202ENST00000624887 CPTPQ5TA50 214 aa18.99■□□□□ 0.63
PCDHB11-202ENST00000624887 ANKRD54Q6NXT1 300 aa18.99■□□□□ 0.63
PCDHB11-202ENST00000624887 LRRTM4Q86VH4 590 aa18.99■□□□□ 0.63
PCDHB11-202ENST00000624887 CHPFQ8IZ52 775 aa18.99■□□□□ 0.63
PCDHB11-202ENST00000624887 GPR156Q8NFN8 814 aa18.99■□□□□ 0.63
PCDHB11-202ENST00000624887 CYGBQ8WWM9 190 aa18.99■□□□□ 0.63
PCDHB11-202ENST00000624887 ELSPBP1Q96BH3 223 aa18.99■□□□□ 0.63
PCDHB11-202ENST00000624887 HAUS8Q9BT25 410 aa18.99■□□□□ 0.63
PCDHB11-202ENST00000624887 LGR4Q9BXB1 951 aa18.99■□□□□ 0.63
PCDHB11-202ENST00000624887 CLK4Q9HAZ1 481 aaKnown RBP18.99■□□□□ 0.63
PCDHB11-202ENST00000624887 PRM3Q9NNZ6 103 aa18.99■□□□□ 0.63
PCDHB11-202ENST00000624887 SLC23A2Q9UGH3 650 aa18.99■□□□□ 0.63
PCDHB11-202ENST00000624887 LINC01565O15544 149 aa18.99■□□□□ 0.63
PCDHB11-202ENST00000624887 PCDH7O60245 1069 aa18.99■□□□□ 0.63
PCDHB11-202ENST00000624887 CST1P01037 141 aa18.99■□□□□ 0.63
PCDHB11-202ENST00000624887 ENGP17813 658 aa18.99■□□□□ 0.63
PCDHB11-202ENST00000624887 KELP23276 732 aa18.99■□□□□ 0.63
PCDHB11-202ENST00000624887 GDI1P31150 447 aa18.99■□□□□ 0.63
PCDHB11-202ENST00000624887 HPCAL1P37235 193 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms