RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 ABHD18Q0P651 414 aa15.76■□□□□ 0.11
LDB3-208ENST00000623007 TSTA3Q13630 321 aaPredicted RBP15.76■□□□□ 0.11
LDB3-208ENST00000623007 DDX39BQ13838 428 aaKnown RBP15.76■□□□□ 0.11
LDB3-208ENST00000623007 CYP51A1Q16850 503 aa15.76■□□□□ 0.11
LDB3-208ENST00000623007 DUOXA1Q1HG43 343 aa15.76■□□□□ 0.11
LDB3-208ENST00000623007 UAP1L1Q3KQV9 507 aa15.76■□□□□ 0.11
LDB3-208ENST00000623007 GLYATQ6IB77 296 aa15.76■□□□□ 0.11
LDB3-208ENST00000623007 PAGE2Q7Z2X7 111 aa15.76■□□□□ 0.11
LDB3-208ENST00000623007 IFNEQ86WN2 208 aa15.76■□□□□ 0.11
LDB3-208ENST00000623007 TICAM1Q8IUC6 712 aa15.76■□□□□ 0.11
LDB3-208ENST00000623007 SYNPOQ8N3V7 929 aa15.76■□□□□ 0.11
LDB3-208ENST00000623007 KRTCAP2Q8N6L1 136 aa15.76■□□□□ 0.11
LDB3-208ENST00000623007 MRGPRX1Q96LB2 322 aa15.76■□□□□ 0.11
LDB3-208ENST00000623007 PKP2Q99959 881 aa15.76■□□□□ 0.11
LDB3-208ENST00000623007 POLMQ9NP87 494 aaPredicted RBP15.76■□□□□ 0.11
LDB3-208ENST00000623007 VAPAQ9P0L0 249 aa15.76■□□□□ 0.11
LDB3-208ENST00000623007 INVSQ9Y283 1065 aa15.76■□□□□ 0.11
LDB3-208ENST00000623007 TDRKHQ9Y2W6 561 aaKnown RBP15.76■□□□□ 0.11
LDB3-208ENST00000623007 CHD7Q9P2D1 2997 aa15.75■□□□□ 0.11
LDB3-208ENST00000623007 ELOVL7A1L3X0 281 aa15.75■□□□□ 0.11
LDB3-208ENST00000623007 ANKDD1BA6NHY2 528 aa15.75■□□□□ 0.11
LDB3-208ENST00000623007 PRR19A6NJB7 356 aa15.75■□□□□ 0.11
LDB3-208ENST00000623007 SCAMP2O15127 329 aaKnown RBP15.75■□□□□ 0.11
LDB3-208ENST00000623007 ZCCHC18P0CG32 403 aa15.75■□□□□ 0.11
LDB3-208ENST00000623007 ACP5P13686 325 aa15.75■□□□□ 0.11
LDB3-208ENST00000623007 GGT1P19440 569 aa15.75■□□□□ 0.11
LDB3-208ENST00000623007 ARFIP1P53367 373 aa15.75■□□□□ 0.11
LDB3-208ENST00000623007 KRT33BQ14525 404 aa15.75■□□□□ 0.11
LDB3-208ENST00000623007 NFATC4Q14934 902 aa15.75■□□□□ 0.11
LDB3-208ENST00000623007 PGS1Q32NB8 556 aa15.75■□□□□ 0.11
LDB3-208ENST00000623007 FAM98BQ52LJ0 330 aaKnown RBP15.75■□□□□ 0.11
LDB3-208ENST00000623007 CPTPQ5TA50 214 aa15.75■□□□□ 0.11
LDB3-208ENST00000623007 LPCAT4Q643R3 524 aa15.75■□□□□ 0.11
LDB3-208ENST00000623007 SERPINA11Q86U17 422 aa15.75■□□□□ 0.11
LDB3-208ENST00000623007 FAM129CQ86XR2 697 aa15.75■□□□□ 0.11
LDB3-208ENST00000623007 SPPL2CQ8IUH8 684 aa15.75■□□□□ 0.11
LDB3-208ENST00000623007 METTL4Q8N3J2 472 aa15.75■□□□□ 0.11
LDB3-208ENST00000623007 C1orf52Q8N6N3 182 aaKnown RBP15.75■□□□□ 0.11
LDB3-208ENST00000623007 CANT1Q8WVQ1 401 aa15.75■□□□□ 0.11
LDB3-208ENST00000623007 FAM3CQ92520 227 aa15.75■□□□□ 0.11
LDB3-208ENST00000623007 SNX19Q92543 992 aa15.75■□□□□ 0.11
LDB3-208ENST00000623007 CENPNQ96H22 339 aaPredicted RBP15.75■□□□□ 0.11
LDB3-208ENST00000623007 C12orf66Q96MD2 445 aa15.75■□□□□ 0.11
LDB3-208ENST00000623007 OR2M4Q96R27 311 aa15.75■□□□□ 0.11
LDB3-208ENST00000623007 FERD3LQ96RJ6 166 aa15.75■□□□□ 0.11
LDB3-208ENST00000623007 GAS2L1Q99501 681 aaPredicted RBP15.75■□□□□ 0.11
LDB3-208ENST00000623007 C9orf16Q9BUW7 83 aa15.75■□□□□ 0.11
LDB3-208ENST00000623007 PHF7Q9BWX1 381 aaPredicted RBP15.75■□□□□ 0.11
LDB3-208ENST00000623007 BHLHE41Q9C0J9 482 aaPredicted RBP15.75■□□□□ 0.11
LDB3-208ENST00000623007 PAIP1Q9H074 479 aaKnown RBP15.75■□□□□ 0.11
LDB3-208ENST00000623007 SLC2A4RGQ9NR83 387 aa15.75■□□□□ 0.11
LDB3-208ENST00000623007 SLAMF8Q9P0V8 285 aa15.75■□□□□ 0.11
LDB3-208ENST00000623007 EGFL7Q9UHF1 273 aa15.75■□□□□ 0.11
LDB3-208ENST00000623007 GNG14A0A1W2PPG7 69 aa15.74■□□□□ 0.11
LDB3-208ENST00000623007 C2CD4DB7Z1M9 353 aa15.74■□□□□ 0.11
LDB3-208ENST00000623007 AKAP10O43572 662 aa15.74■□□□□ 0.11
LDB3-208ENST00000623007 DENRO43583 198 aaKnown RBP15.74■□□□□ 0.11
LDB3-208ENST00000623007 PCDH7O60245 1069 aa15.74■□□□□ 0.11
LDB3-208ENST00000623007 RETP07949 1114 aa15.74■□□□□ 0.11
LDB3-208ENST00000623007 CDH1P12830 882 aa15.74■□□□□ 0.11
LDB3-208ENST00000623007 COL9A1P20849 921 aa15.74■□□□□ 0.11
LDB3-208ENST00000623007 AKT2P31751 481 aa15.74■□□□□ 0.11
LDB3-208ENST00000623007 ATXN3P54252 364 aaPredicted RBP15.74■□□□□ 0.11
LDB3-208ENST00000623007 RPS13P62277 151 aaKnown RBP15.74■□□□□ 0.11
LDB3-208ENST00000623007 INTS11Q5TA45 600 aaKnown RBP15.74■□□□□ 0.11
LDB3-208ENST00000623007 KBTBD2Q8IY47 623 aa15.74■□□□□ 0.11
LDB3-208ENST00000623007 OR2L8Q8NGY9 312 aa15.74■□□□□ 0.11
LDB3-208ENST00000623007 FAM120BQ96EK7 910 aaKnown RBP15.74■□□□□ 0.11
LDB3-208ENST00000623007 REXO5Q96IC2 774 aaKnown RBP15.74■□□□□ 0.11
LDB3-208ENST00000623007 WDR92Q96MX6 357 aa15.74■□□□□ 0.11
LDB3-208ENST00000623007 DUSP26Q9BV47 211 aa15.74■□□□□ 0.11
LDB3-208ENST00000623007 OSGEPL1Q9H4B0 414 aa15.74■□□□□ 0.11
LDB3-208ENST00000623007 KAT8Q9H7Z6 458 aaKnown RBP15.74■□□□□ 0.11
LDB3-208ENST00000623007 MYNNQ9NPC7 610 aa15.74■□□□□ 0.11
LDB3-208ENST00000623007 ATP6V1HQ9UI12 483 aa15.74■□□□□ 0.11
LDB3-208ENST00000623007 SCOCQ9UIL1 159 aa15.74■□□□□ 0.11
LDB3-208ENST00000623007 PCDHB11Q9Y5F2 797 aa15.74■□□□□ 0.11
LDB3-208ENST00000623007 HS3ST3A1Q9Y663 406 aa15.74■□□□□ 0.11
LDB3-208ENST00000623007 TRANK1O15050 2925 aa15.74■□□□□ 0.11
LDB3-208ENST00000623007 RNASET2O00584 256 aaKnown RBP15.73■□□□□ 0.11
LDB3-208ENST00000623007 EPN2O95208 641 aa15.73■□□□□ 0.11
LDB3-208ENST00000623007 IGLV3-19P01714 112 aa15.73■□□□□ 0.11
LDB3-208ENST00000623007 GRK3P35626 688 aa15.73■□□□□ 0.11
LDB3-208ENST00000623007 DGKEP52429 567 aa15.73■□□□□ 0.11
LDB3-208ENST00000623007 MTPNP58546 118 aa15.73■□□□□ 0.11
LDB3-208ENST00000623007 BLMHQ13867 455 aa15.73■□□□□ 0.11
LDB3-208ENST00000623007 CCINQ13939 588 aa15.73■□□□□ 0.11
LDB3-208ENST00000623007 CATSPEREQ5SY80 951 aa15.73■□□□□ 0.11
LDB3-208ENST00000623007 ADGRG5Q8IZF4 528 aa15.73■□□□□ 0.11
LDB3-208ENST00000623007 EID3Q8N140 333 aa15.73■□□□□ 0.11
LDB3-208ENST00000623007 LILRA2Q8N149 483 aa15.73■□□□□ 0.11
LDB3-208ENST00000623007 TRIML2Q8N7C3 387 aa15.73■□□□□ 0.11
LDB3-208ENST00000623007 SPDYE1Q8NFV5 336 aaPredicted RBP15.73■□□□□ 0.11
LDB3-208ENST00000623007 OR4K1Q8NGD4 311 aa15.73■□□□□ 0.11
LDB3-208ENST00000623007 COQ8BQ96D53 544 aa15.73■□□□□ 0.11
LDB3-208ENST00000623007 ZNF583Q96ND8 569 aa15.73■□□□□ 0.11
LDB3-208ENST00000623007 PHF12Q96QT6 1004 aa15.73■□□□□ 0.11
LDB3-208ENST00000623007 PANX1Q96RD7 426 aa15.73■□□□□ 0.11
LDB3-208ENST00000623007 CPPED1Q9BRF8 314 aaPredicted RBP15.73■□□□□ 0.11
LDB3-208ENST00000623007 BDH2Q9BUT1 245 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms