RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 UCHL1P09936 223 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 FAM86B2P0C5J1 330 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 BCKDHAP12694 445 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 REPS2Q8NFH8 660 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 OR10G2Q8NGC3 310 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 TMEM246Q9BRR3 403 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 ZDHHC4Q9NPG8 344 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 MEPEQ9NQ76 525 aaPredicted RBP6.99□□□□□ -1.29
COLCA1-205ENST00000620864 LOC100130705A0A1B0GUX0 176 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 KCNU1A8MYU2 1149 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 ZNF182P17025 639 aaPredicted RBP6.99□□□□□ -1.29
COLCA1-205ENST00000620864 CD52P31358 61 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 CDK3Q00526 305 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 TARDBPQ13148 414 aaKnown RBP eCLIP6.99□□□□□ -1.29
COLCA1-205ENST00000620864 EXOC3L2Q2M3D2 409 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 SLC39A12Q504Y0 691 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 ATAD3CQ5T2N8 411 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 OR2T5Q6IEZ7 315 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 ARHGAP11AQ6P4F7 1023 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 Q8N402 240 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 OR2T29Q8NH02 315 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 MCMBPQ9BTE3 642 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 UCK2Q9BZX2 261 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 CDT1Q9H211 546 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 ACTR3BQ9P1U1 418 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 HEBP2Q9Y5Z4 205 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 C13orf42A0A1B0GVH6 325 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 C20orf202A1L168 122 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 HTR3EA5X5Y0 456 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 CACNB4O00305 520 aaPredicted RBP6.99□□□□□ -1.29
COLCA1-205ENST00000620864 PAHP00439 452 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 IMPDH1P20839 514 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 HOXA10P31260 410 aaPredicted RBP6.99□□□□□ -1.29
COLCA1-205ENST00000620864 PPM1AP35813 382 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 OAZ1P54368 228 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 ERVK-8P63133 956 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 HES5Q5TA89 166 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 HACD4Q5VWC8 232 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 ANKRD13BQ86YJ7 626 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 HEPHQ9BQS7 1158 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 ROBO3Q96MS0 1386 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 FLRT2O43155 660 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 FAM189A1O60320 539 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 GLUD1P00367 558 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 ANXA4P09525 319 aaPredicted RBP6.99□□□□□ -1.29
COLCA1-205ENST00000620864 S100A7P31151 101 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 PTPN9P43378 593 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 BLOC1S1P78537 153 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 ST3GAL4Q11206 333 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 ZNF155Q12901 538 aaPredicted RBP6.99□□□□□ -1.29
COLCA1-205ENST00000620864 SLC1A5Q15758 541 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 ZNF792Q3KQV3 632 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 DCST2Q5T1A1 773 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 APOBEC3HQ6NTF7 200 aaKnown RBP6.99□□□□□ -1.29
COLCA1-205ENST00000620864 UGT2A3Q6UWM9 527 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 SLC36A4Q6YBV0 504 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 DPY19L3Q6ZPD9 716 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 PRR7Q8TB68 274 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 ADAMTS19Q8TE59 1207 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 DHRS1Q96LJ7 313 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 LHX5Q9H2C1 402 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 PNO1Q9NRX1 252 aaKnown RBP6.99□□□□□ -1.29
COLCA1-205ENST00000620864 COL20A1Q9P218 1284 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 COPS7AQ9UBW8 275 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 ZNF223Q9UK11 482 aaPredicted RBP6.99□□□□□ -1.29
COLCA1-205ENST00000620864 MDFIC2A0A1B0GVS7 189 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 NAP1L6A6NFF2 107 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 HOXB9P17482 250 aaPredicted RBP6.99□□□□□ -1.29
COLCA1-205ENST00000620864 ETV5P41161 510 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 ALDH3B1P43353 468 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 TAS2R31P59538 309 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 QPCTQ16769 361 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 IL23RQ5VWK5 629 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 COMMD7Q86VX2 200 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 ZBTB2Q8N680 514 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 ZSCAN4Q8NAM6 433 aaPredicted RBP6.99□□□□□ -1.29
COLCA1-205ENST00000620864 PSD4Q8NDX1 1056 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 FAM46DQ8NEK8 389 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 SLC22A17Q8WUG5 538 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 EDEM1Q92611 657 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 ZUFSPQ96AP4 578 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 LRATO95237 230 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 HRGP04196 525 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 C2P06681 752 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 H2AFB2P0C5Z0 115 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 CHRNB2P17787 502 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 HDCP19113 662 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 HTR2BP41595 481 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 IDH3AP50213 366 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 CDH8P55286 799 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 POU4F2Q12837 409 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 BNIP3Q12983 259 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 GK3PQ14409 553 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 ZNF460Q14592 562 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 PUM1Q14671 1186 aaKnown RBP eCLIP6.99□□□□□ -1.29
COLCA1-205ENST00000620864 HECTD2Q5U5R9 776 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 NINJ1Q92982 152 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 ISOC1Q96CN7 298 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 SCLYQ96I15 445 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 SLC35G5Q96KT7 338 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms