RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 NPHS2Q9NP85 383 aa7.71□□□□□ -1.18
CPNE3-209ENST00000620393 SLC6A20Q9NP91 592 aa7.71□□□□□ -1.18
CPNE3-209ENST00000620393 C1GALT1Q9NS00 363 aa7.71□□□□□ -1.18
CPNE3-209ENST00000620393 RXFP3Q9NSD7 469 aa7.71□□□□□ -1.18
CPNE3-209ENST00000620393 DCTN4Q9UJW0 460 aa7.71□□□□□ -1.18
CPNE3-209ENST00000620393 POMT2Q9UKY4 750 aa7.71□□□□□ -1.18
CPNE3-209ENST00000620393 SNX6Q9UNH7 406 aa7.71□□□□□ -1.18
CPNE3-209ENST00000620393 APOBEC2Q9Y235 224 aaKnown RBP7.71□□□□□ -1.18
CPNE3-209ENST00000620393 FIS1Q9Y3D6 152 aa7.71□□□□□ -1.18
CPNE3-209ENST00000620393 CEP192Q8TEP8 1941 aa7.71□□□□□ -1.18
CPNE3-209ENST00000620393 A0A0G2JND7 137 aa7.7□□□□□ -1.18
CPNE3-209ENST00000620393 A0A0J9YY10 115 aa7.7□□□□□ -1.18
CPNE3-209ENST00000620393 TRBC2A0A5B9 178 aa7.7□□□□□ -1.18
CPNE3-209ENST00000620393 C4orf47A7E2U8 309 aa7.7□□□□□ -1.18
CPNE3-209ENST00000620393 RNF223E7ERA6 249 aa7.7□□□□□ -1.18
CPNE3-209ENST00000620393 SLC28A1O00337 649 aa7.7□□□□□ -1.18
CPNE3-209ENST00000620393 FOXE1O00358 373 aaPredicted RBP7.7□□□□□ -1.18
CPNE3-209ENST00000620393 SDHDO14521 159 aa7.7□□□□□ -1.18
CPNE3-209ENST00000620393 NDUFAB1O14561 156 aa7.7□□□□□ -1.18
CPNE3-209ENST00000620393 FFAR3O14843 346 aa7.7□□□□□ -1.18
CPNE3-209ENST00000620393 PIP5K1BO14986 540 aa7.7□□□□□ -1.18
CPNE3-209ENST00000620393 CAPN5O15484 640 aaPredicted RBP7.7□□□□□ -1.18
CPNE3-209ENST00000620393 GPR42O15529 346 aa7.7□□□□□ -1.18
CPNE3-209ENST00000620393 DUX1O43812 170 aa7.7□□□□□ -1.18
CPNE3-209ENST00000620393 SH3BP5O60239 455 aa7.7□□□□□ -1.18
CPNE3-209ENST00000620393 LCMT2O60294 686 aaKnown RBP7.7□□□□□ -1.18
CPNE3-209ENST00000620393 PDYNP01213 254 aa7.7□□□□□ -1.18
CPNE3-209ENST00000620393 JUNP05412 331 aaKnown RBP7.7□□□□□ -1.18
CPNE3-209ENST00000620393 LINC00032P0C843 101 aa7.7□□□□□ -1.18
CPNE3-209ENST00000620393 CKMT2P17540 419 aa7.7□□□□□ -1.18
CPNE3-209ENST00000620393 GRK3P35626 688 aa7.7□□□□□ -1.18
CPNE3-209ENST00000620393 SCTRP47872 440 aa7.7□□□□□ -1.18
CPNE3-209ENST00000620393 HTR6P50406 440 aa7.7□□□□□ -1.18
CPNE3-209ENST00000620393 NEK2P51955 445 aa7.7□□□□□ -1.18
CPNE3-209ENST00000620393 PPP1CAP62136 330 aa7.7□□□□□ -1.18
CPNE3-209ENST00000620393 DAB2P98082 770 aa7.7□□□□□ -1.18
CPNE3-209ENST00000620393 REEP5Q00765 189 aa7.7□□□□□ -1.18
CPNE3-209ENST00000620393 CFHR1Q03591 330 aa7.7□□□□□ -1.18
CPNE3-209ENST00000620393 SF3A3Q12874 501 aaKnown RBP eCLIP7.7□□□□□ -1.18
CPNE3-209ENST00000620393 IFT88Q13099 833 aa7.7□□□□□ -1.18
CPNE3-209ENST00000620393 NAA25Q14CX7 972 aa7.7□□□□□ -1.18
CPNE3-209ENST00000620393 ABRAXAS2Q15018 415 aa7.7□□□□□ -1.18
CPNE3-209ENST00000620393 RBBP5Q15291 538 aaKnown RBP7.7□□□□□ -1.18
CPNE3-209ENST00000620393 TERF2Q15554 542 aa7.7□□□□□ -1.18
CPNE3-209ENST00000620393 PDCD2Q16342 344 aaPredicted RBP7.7□□□□□ -1.18
CPNE3-209ENST00000620393 CLPPQ16740 277 aaPredicted RBP7.7□□□□□ -1.18
CPNE3-209ENST00000620393 AMZ1Q400G9 498 aa7.7□□□□□ -1.18
CPNE3-209ENST00000620393 SGO1Q5FBB7 561 aa7.7□□□□□ -1.18
CPNE3-209ENST00000620393 TCHHL1Q5QJ38 904 aaPredicted RBP7.7□□□□□ -1.18
CPNE3-209ENST00000620393 PERM1Q5SV97 790 aa7.7□□□□□ -1.18
CPNE3-209ENST00000620393 VWA5B1Q5TIE3 1220 aa7.7□□□□□ -1.18
CPNE3-209ENST00000620393 GKAP1Q5VSY0 366 aaPredicted RBP7.7□□□□□ -1.18
CPNE3-209ENST00000620393 FCRL6Q6DN72 434 aa7.7□□□□□ -1.18
CPNE3-209ENST00000620393 IRGCQ6NXR0 463 aa7.7□□□□□ -1.18
CPNE3-209ENST00000620393 WDR74Q6RFH5 385 aaPredicted RBP7.7□□□□□ -1.18
CPNE3-209ENST00000620393 SCIMPQ6UWF3 145 aa7.7□□□□□ -1.18
CPNE3-209ENST00000620393 PRR23CQ6ZRP0 262 aa7.7□□□□□ -1.18
CPNE3-209ENST00000620393 Q6ZSR9 355 aa7.7□□□□□ -1.18
CPNE3-209ENST00000620393 SPRED1Q7Z699 444 aa7.7□□□□□ -1.18
CPNE3-209ENST00000620393 TRIM73Q86UV7 250 aa7.7□□□□□ -1.18
CPNE3-209ENST00000620393 PLXDC1Q8IUK5 500 aa7.7□□□□□ -1.18
CPNE3-209ENST00000620393 TBC1D19Q8N5T2 526 aa7.7□□□□□ -1.18
CPNE3-209ENST00000620393 ZNF740Q8NDX6 193 aa7.7□□□□□ -1.18
CPNE3-209ENST00000620393 BAHD1Q8TBE0 780 aaPredicted RBP7.7□□□□□ -1.18
CPNE3-209ENST00000620393 WDR20Q8TBZ3 569 aa7.7□□□□□ -1.18
CPNE3-209ENST00000620393 ACTRT2Q8TDY3 377 aa7.7□□□□□ -1.18
CPNE3-209ENST00000620393 ZNF473Q8WTR7 871 aaKnown RBP7.7□□□□□ -1.18
CPNE3-209ENST00000620393 SELENOMQ8WWX9 145 aa7.7□□□□□ -1.18
CPNE3-209ENST00000620393 STON2Q8WXE9 905 aa7.7□□□□□ -1.18
CPNE3-209ENST00000620393 MTFMTQ96DP5 389 aaKnown RBP7.7□□□□□ -1.18
CPNE3-209ENST00000620393 THAP11Q96EK4 314 aa7.7□□□□□ -1.18
CPNE3-209ENST00000620393 PRR11Q96HE9 360 aaPredicted RBP7.7□□□□□ -1.18
CPNE3-209ENST00000620393 CNDP2Q96KP4 475 aaKnown RBP7.7□□□□□ -1.18
CPNE3-209ENST00000620393 C3orf30Q96M34 536 aa7.7□□□□□ -1.18
CPNE3-209ENST00000620393 PPM1MQ96MI6 270 aa7.7□□□□□ -1.18
CPNE3-209ENST00000620393 TRAPPC9Q96Q05 1148 aa7.7□□□□□ -1.18
CPNE3-209ENST00000620393 CD180Q99467 661 aa7.7□□□□□ -1.18
CPNE3-209ENST00000620393 CCDC28BQ9BUN5 200 aa7.7□□□□□ -1.18
CPNE3-209ENST00000620393 CHRNA10Q9GZZ6 450 aa7.7□□□□□ -1.18
CPNE3-209ENST00000620393 SPNS1Q9H2V7 528 aa7.7□□□□□ -1.18
CPNE3-209ENST00000620393 RHBGQ9H310 441 aa7.7□□□□□ -1.18
CPNE3-209ENST00000620393 SEMA6CQ9H3T2 930 aa7.7□□□□□ -1.18
CPNE3-209ENST00000620393 LRRN3Q9H3W5 708 aa7.7□□□□□ -1.18
CPNE3-209ENST00000620393 WDR55Q9H6Y2 383 aaPredicted RBP7.7□□□□□ -1.18
CPNE3-209ENST00000620393 MEAF6Q9HAF1 191 aa7.7□□□□□ -1.18
CPNE3-209ENST00000620393 SEMA5BQ9P283 1151 aa7.7□□□□□ -1.18
CPNE3-209ENST00000620393 ANKMY1Q9P2S6 941 aa7.7□□□□□ -1.18
CPNE3-209ENST00000620393 ADGRE2Q9UHX3 823 aa7.7□□□□□ -1.18
CPNE3-209ENST00000620393 KLHL20Q9Y2M5 609 aa7.7□□□□□ -1.18
CPNE3-209ENST00000620393 USP34Q70CQ2 3546 aa7.69□□□□□ -1.18
CPNE3-209ENST00000620393 PI4KAP42356 2102 aa7.69□□□□□ -1.18
CPNE3-209ENST00000620393 TNRC6BQ9UPQ9 1833 aaKnown RBP7.69□□□□□ -1.18
CPNE3-209ENST00000620393 A0A1W2PQM1 296 aa7.69□□□□□ -1.18
CPNE3-209ENST00000620393 FEZF1A0PJY2 475 aa7.69□□□□□ -1.18
CPNE3-209ENST00000620393 OR2A25A4D2G3 310 aa7.69□□□□□ -1.18
CPNE3-209ENST00000620393 ANKDD1BA6NHY2 528 aa7.69□□□□□ -1.18
CPNE3-209ENST00000620393 SLC9B1P1A6NJY1 282 aa7.69□□□□□ -1.18
CPNE3-209ENST00000620393 RGS14O43566 566 aa7.69□□□□□ -1.18
CPNE3-209ENST00000620393 OR1F1O43749 312 aa7.69□□□□□ -1.18
CPNE3-209ENST00000620393 DIAPH2O60879 1101 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms