RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 PRMT3O60678 531 aa16.7■□□□□ 0.26
PCDHGC3-205ENST00000617641 TGFB1P01137 390 aa16.7■□□□□ 0.26
PCDHGC3-205ENST00000617641 DRD1P21728 446 aa16.7■□□□□ 0.26
PCDHGC3-205ENST00000617641 IGFBP4P22692 258 aa16.7■□□□□ 0.26
PCDHGC3-205ENST00000617641 MRPS35P82673 323 aaKnown RBP16.7■□□□□ 0.26
PCDHGC3-205ENST00000617641 DMPKQ09013 629 aa16.7■□□□□ 0.26
PCDHGC3-205ENST00000617641 COL19A1Q14993 1142 aa16.7■□□□□ 0.26
PCDHGC3-205ENST00000617641 NRF1Q16656 503 aa16.7■□□□□ 0.26
PCDHGC3-205ENST00000617641 HKDC1Q2TB90 917 aa16.7■□□□□ 0.26
PCDHGC3-205ENST00000617641 TMEM154Q6P9G4 183 aa16.7■□□□□ 0.26
PCDHGC3-205ENST00000617641 GCNT7Q6ZNI0 430 aa16.7■□□□□ 0.26
PCDHGC3-205ENST00000617641 TMEM132CQ8N3T6 1108 aa16.7■□□□□ 0.26
PCDHGC3-205ENST00000617641 TRPV3Q8NET8 790 aa16.7■□□□□ 0.26
PCDHGC3-205ENST00000617641 NELL1Q92832 810 aa16.7■□□□□ 0.26
PCDHGC3-205ENST00000617641 C12orf66Q96MD2 445 aa16.7■□□□□ 0.26
PCDHGC3-205ENST00000617641 INSM2Q96T92 566 aaPredicted RBP16.7■□□□□ 0.26
PCDHGC3-205ENST00000617641 SH3GL1Q99961 368 aa16.7■□□□□ 0.26
PCDHGC3-205ENST00000617641 MENTQ9BUN1 341 aa16.7■□□□□ 0.26
PCDHGC3-205ENST00000617641 VCXQ9H320 206 aa16.7■□□□□ 0.26
PCDHGC3-205ENST00000617641 OR51B5Q9H339 312 aa16.7■□□□□ 0.26
PCDHGC3-205ENST00000617641 PREBQ9HCU5 417 aa16.7■□□□□ 0.26
PCDHGC3-205ENST00000617641 LIMD1Q9UGP4 676 aa16.7■□□□□ 0.26
PCDHGC3-205ENST00000617641 SUFUQ9UMX1 484 aa16.7■□□□□ 0.26
PCDHGC3-205ENST00000617641 INVSQ9Y283 1065 aa16.7■□□□□ 0.26
PCDHGC3-205ENST00000617641 SLC17A4Q9Y2C5 497 aa16.7■□□□□ 0.26
PCDHGC3-205ENST00000617641 FOXE1O00358 373 aaPredicted RBP16.69■□□□□ 0.26
PCDHGC3-205ENST00000617641 PSMB5P28074 263 aa16.69■□□□□ 0.26
PCDHGC3-205ENST00000617641 TIA1P31483 386 aaKnown RBP eCLIP16.69■□□□□ 0.26
PCDHGC3-205ENST00000617641 WNT3P56703 355 aa16.69■□□□□ 0.26
PCDHGC3-205ENST00000617641 SRSF11Q05519 484 aaKnown RBP16.69■□□□□ 0.26
PCDHGC3-205ENST00000617641 C10orf111Q8N326 155 aa16.69■□□□□ 0.26
PCDHGC3-205ENST00000617641 FIG4Q92562 907 aa16.69■□□□□ 0.26
PCDHGC3-205ENST00000617641 MRGPRX1Q96LB2 322 aa16.69■□□□□ 0.26
PCDHGC3-205ENST00000617641 GBP5Q96PP8 586 aa16.69■□□□□ 0.26
PCDHGC3-205ENST00000617641 SEPHS2Q99611 448 aa16.69■□□□□ 0.26
PCDHGC3-205ENST00000617641 HAUS8Q9BT25 410 aa16.69■□□□□ 0.26
PCDHGC3-205ENST00000617641 BTBD1Q9H0C5 482 aa16.69■□□□□ 0.26
PCDHGC3-205ENST00000617641 KAT8Q9H7Z6 458 aaKnown RBP16.69■□□□□ 0.26
PCDHGC3-205ENST00000617641 KCNK12Q9HB15 430 aa16.69■□□□□ 0.26
PCDHGC3-205ENST00000617641 AGPAT4Q9NRZ5 378 aa16.69■□□□□ 0.26
PCDHGC3-205ENST00000617641 BTBD3Q9Y2F9 522 aa16.69■□□□□ 0.26
PCDHGC3-205ENST00000617641 GPSM3Q9Y4H4 160 aa16.69■□□□□ 0.26
PCDHGC3-205ENST00000617641 GNG14A0A1W2PPG7 69 aa16.69■□□□□ 0.26
PCDHGC3-205ENST00000617641 PCDH7O60245 1069 aa16.69■□□□□ 0.26
PCDHGC3-205ENST00000617641 MT-ND1P03886 318 aa16.69■□□□□ 0.26
PCDHGC3-205ENST00000617641 ANXA6P08133 673 aa16.69■□□□□ 0.26
PCDHGC3-205ENST00000617641 LAMP1P11279 417 aa16.69■□□□□ 0.26
PCDHGC3-205ENST00000617641 BMP2P12643 396 aa16.69■□□□□ 0.26
PCDHGC3-205ENST00000617641 CKMT2P17540 419 aa16.69■□□□□ 0.26
PCDHGC3-205ENST00000617641 LAPTM5Q13571 262 aa16.69■□□□□ 0.26
PCDHGC3-205ENST00000617641 ARHGAP19Q14CB8 494 aa16.69■□□□□ 0.26
PCDHGC3-205ENST00000617641 MLF2Q15773 248 aaPredicted RBP16.69■□□□□ 0.26
PCDHGC3-205ENST00000617641 CYP2A13Q16696 494 aa16.69■□□□□ 0.26
PCDHGC3-205ENST00000617641 DPY19L1Q2PZI1 675 aa16.69■□□□□ 0.26
PCDHGC3-205ENST00000617641 KIAA1324Q6UXG2 1013 aaKnown RBP16.69■□□□□ 0.26
PCDHGC3-205ENST00000617641 MSANTD1Q6ZTZ1 278 aa16.69■□□□□ 0.26
PCDHGC3-205ENST00000617641 ARMCX6Q7L4S7 300 aa16.69■□□□□ 0.26
PCDHGC3-205ENST00000617641 TBC1D21Q8IYX1 336 aa16.69■□□□□ 0.26
PCDHGC3-205ENST00000617641 SLC44A3Q8N4M1 653 aa16.69■□□□□ 0.26
PCDHGC3-205ENST00000617641 ANKFN1Q8N957 763 aa16.69■□□□□ 0.26
PCDHGC3-205ENST00000617641 RPLP0P6Q8NHW5 317 aa16.69■□□□□ 0.26
PCDHGC3-205ENST00000617641 CCDC115Q96NT0 180 aa16.69■□□□□ 0.26
PCDHGC3-205ENST00000617641 FERD3LQ96RJ6 166 aa16.69■□□□□ 0.26
PCDHGC3-205ENST00000617641 SLC29A1Q99808 456 aa16.69■□□□□ 0.26
PCDHGC3-205ENST00000617641 TIMM29Q9BSF4 260 aa16.69■□□□□ 0.26
PCDHGC3-205ENST00000617641 CNOT11Q9UKZ1 510 aaKnown RBP16.69■□□□□ 0.26
PCDHGC3-205ENST00000617641 KLHL33A6NCF5 533 aa16.68■□□□□ 0.26
PCDHGC3-205ENST00000617641 MAGEA13PA6NCF6 341 aa16.68■□□□□ 0.26
PCDHGC3-205ENST00000617641 SAC3D1A6NKF1 404 aa16.68■□□□□ 0.26
PCDHGC3-205ENST00000617641 SCAMP2O15127 329 aaKnown RBP16.68■□□□□ 0.26
PCDHGC3-205ENST00000617641 GSTA4O15217 222 aa16.68■□□□□ 0.26
PCDHGC3-205ENST00000617641 YY2O15391 372 aa16.68■□□□□ 0.26
PCDHGC3-205ENST00000617641 C1QCP02747 245 aa16.68■□□□□ 0.26
PCDHGC3-205ENST00000617641 GBAP04062 536 aa16.68■□□□□ 0.26
PCDHGC3-205ENST00000617641 UMPSP11172 480 aa16.68■□□□□ 0.26
PCDHGC3-205ENST00000617641 EFNA1P20827 205 aaPredicted RBP16.68■□□□□ 0.26
PCDHGC3-205ENST00000617641 FASP25445 335 aa16.68■□□□□ 0.26
PCDHGC3-205ENST00000617641 CLDN2P57739 230 aa16.68■□□□□ 0.26
PCDHGC3-205ENST00000617641 C21orf58P58505 322 aa16.68■□□□□ 0.26
PCDHGC3-205ENST00000617641 MRPS21P82921 87 aaKnown RBP16.68■□□□□ 0.26
PCDHGC3-205ENST00000617641 DUOXA1Q1HG43 343 aa16.68■□□□□ 0.26
PCDHGC3-205ENST00000617641 PYCR3Q53H96 274 aa16.68■□□□□ 0.26
PCDHGC3-205ENST00000617641 TMEM92Q6UXU6 159 aa16.68■□□□□ 0.26
PCDHGC3-205ENST00000617641 COMMD6Q7Z4G1 85 aa16.68■□□□□ 0.26
PCDHGC3-205ENST00000617641 C17orf64Q86WR6 236 aa16.68■□□□□ 0.26
PCDHGC3-205ENST00000617641 FAM129CQ86XR2 697 aa16.68■□□□□ 0.26
PCDHGC3-205ENST00000617641 SH3KBP1Q96B97 665 aa16.68■□□□□ 0.26
PCDHGC3-205ENST00000617641 C8orf33Q9H7E9 229 aaPredicted RBP16.68■□□□□ 0.26
PCDHGC3-205ENST00000617641 TRPV5Q9NQA5 729 aa16.68■□□□□ 0.26
PCDHGC3-205ENST00000617641 IMP3Q9NV31 184 aaKnown RBP16.68■□□□□ 0.26
PCDHGC3-205ENST00000617641 CUEDC1Q9NWM3 386 aaPredicted RBP16.68■□□□□ 0.26
PCDHGC3-205ENST00000617641 FZD4Q9ULV1 537 aa16.68■□□□□ 0.26
PCDHGC3-205ENST00000617641 SCML1Q9UN30 329 aa16.68■□□□□ 0.26
PCDHGC3-205ENST00000617641 NCKAP1Q9Y2A7 1128 aa16.68■□□□□ 0.26
PCDHGC3-205ENST00000617641 AP4B1Q9Y6B7 739 aa16.68■□□□□ 0.26
PCDHGC3-205ENST00000617641 PRUNE2Q8WUY3 3088 aa16.68■□□□□ 0.26
PCDHGC3-205ENST00000617641 ELOVL7A1L3X0 281 aa16.68■□□□□ 0.26
PCDHGC3-205ENST00000617641 POM121BA6NF01 834 aa16.68■□□□□ 0.26
PCDHGC3-205ENST00000617641 CACNB4O00305 520 aaPredicted RBP16.68■□□□□ 0.26
PCDHGC3-205ENST00000617641 FPGTO14772 594 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms