RNA–Protein interactions for RNA: ENST00000616944.4

CBWD1-225, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-225ENST00000616944 CXCR2P25025 360 aa14.56□□□□□ -0.08
CBWD1-225ENST00000616944 IFT88Q13099 833 aa14.56□□□□□ -0.08
CBWD1-225ENST00000616944 SF3A2Q15428 464 aaKnown RBP14.56□□□□□ -0.08
CBWD1-225ENST00000616944 NR0B2Q15466 257 aa14.56□□□□□ -0.08
CBWD1-225ENST00000616944 PROX2Q3B8N5 592 aa14.56□□□□□ -0.08
CBWD1-225ENST00000616944 ACAD11Q709F0 780 aa14.56□□□□□ -0.08
CBWD1-225ENST00000616944 VN1R5Q7Z5H4 357 aa14.56□□□□□ -0.08
CBWD1-225ENST00000616944 TRIM73Q86UV7 250 aa14.56□□□□□ -0.08
CBWD1-225ENST00000616944 PAQR7Q86WK9 346 aa14.56□□□□□ -0.08
CBWD1-225ENST00000616944 KRT78Q8N1N4 520 aa14.56□□□□□ -0.08
CBWD1-225ENST00000616944 RNF175Q8N4F7 328 aa14.56□□□□□ -0.08
CBWD1-225ENST00000616944 EID2Q8N6I1 236 aa14.56□□□□□ -0.08
CBWD1-225ENST00000616944 ANKRD53Q8N9V6 530 aa14.56□□□□□ -0.08
CBWD1-225ENST00000616944 OR6C4Q8NGE1 309 aa14.56□□□□□ -0.08
CBWD1-225ENST00000616944 CEP70Q8NHQ1 597 aa14.56□□□□□ -0.08
CBWD1-225ENST00000616944 UBE2E3Q969T4 207 aa14.56□□□□□ -0.08
CBWD1-225ENST00000616944 REPS1Q96D71 796 aa14.56□□□□□ -0.08
CBWD1-225ENST00000616944 PPM1MQ96MI6 270 aa14.56□□□□□ -0.08
CBWD1-225ENST00000616944 PLCD4Q9BRC7 762 aa14.56□□□□□ -0.08
CBWD1-225ENST00000616944 ABCG4Q9H172 646 aa14.56□□□□□ -0.08
CBWD1-225ENST00000616944 RHBGQ9H310 441 aa14.56□□□□□ -0.08
CBWD1-225ENST00000616944 EPB41L1Q9H4G0 881 aa14.56□□□□□ -0.08
CBWD1-225ENST00000616944 AKTIPQ9H8T0 292 aa14.56□□□□□ -0.08
CBWD1-225ENST00000616944 PFDN4Q9NQP4 134 aa14.56□□□□□ -0.08
CBWD1-225ENST00000616944 ANKMY1Q9P2S6 941 aa14.56□□□□□ -0.08
CBWD1-225ENST00000616944 HEY2Q9UBP5 337 aa14.56□□□□□ -0.08
CBWD1-225ENST00000616944 EPHA6Q9UF33 1036 aa14.56□□□□□ -0.08
CBWD1-225ENST00000616944 PPT2Q9UMR5 302 aa14.56□□□□□ -0.08
CBWD1-225ENST00000616944 BTBD3Q9Y2F9 522 aa14.56□□□□□ -0.08
CBWD1-225ENST00000616944 COL27A1Q8IZC6 1860 aaPredicted RBP14.56□□□□□ -0.08
CBWD1-225ENST00000616944 RIF1Q5UIP0 2472 aaKnown RBP14.56□□□□□ -0.08
CBWD1-225ENST00000616944 A0A0J9YY10 115 aa14.55□□□□□ -0.08
CBWD1-225ENST00000616944 TRBC2A0A5B9 178 aa14.55□□□□□ -0.08
CBWD1-225ENST00000616944 EME2A4GXA9 379 aaPredicted RBP14.55□□□□□ -0.08
CBWD1-225ENST00000616944 CDX4O14627 284 aaPredicted RBP14.55□□□□□ -0.08
CBWD1-225ENST00000616944 LSM1O15116 133 aaKnown RBP14.55□□□□□ -0.08
CBWD1-225ENST00000616944 TBX6O95947 436 aaPredicted RBP14.55□□□□□ -0.08
CBWD1-225ENST00000616944 HSD3B1P14060 373 aa14.55□□□□□ -0.08
CBWD1-225ENST00000616944 HOXB3P14651 431 aaPredicted RBP14.55□□□□□ -0.08
CBWD1-225ENST00000616944 PRPH2P23942 346 aa14.55□□□□□ -0.08
CBWD1-225ENST00000616944 HSD3B2P26439 372 aa14.55□□□□□ -0.08
CBWD1-225ENST00000616944 PIK3CBP42338 1070 aa14.55□□□□□ -0.08
CBWD1-225ENST00000616944 ATXN3P54252 364 aaPredicted RBP14.55□□□□□ -0.08
CBWD1-225ENST00000616944 CSTF3Q12996 717 aaKnown RBP14.55□□□□□ -0.08
CBWD1-225ENST00000616944 METTL21CQ5VZV1 264 aa14.55□□□□□ -0.08
CBWD1-225ENST00000616944 OGFOD2Q6N063 350 aa14.55□□□□□ -0.08
CBWD1-225ENST00000616944 GUSBP11Q6P575 273 aa14.55□□□□□ -0.08
CBWD1-225ENST00000616944 CHSY3Q70JA7 882 aa14.55□□□□□ -0.08
CBWD1-225ENST00000616944 SPRED1Q7Z699 444 aa14.55□□□□□ -0.08
CBWD1-225ENST00000616944 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.55□□□□□ -0.08
CBWD1-225ENST00000616944 HUS1BQ8NHY5 278 aa14.55□□□□□ -0.08
CBWD1-225ENST00000616944 CCDC74AQ96AQ1 378 aa14.55□□□□□ -0.08
CBWD1-225ENST00000616944 RILPQ96NA2 401 aa14.55□□□□□ -0.08
CBWD1-225ENST00000616944 MTERF1Q99551 399 aaKnown RBP14.55□□□□□ -0.08
CBWD1-225ENST00000616944 MYLK2Q9H1R3 596 aa14.55□□□□□ -0.08
CBWD1-225ENST00000616944 SYNPO2LQ9H987 977 aa14.55□□□□□ -0.08
CBWD1-225ENST00000616944 BRF2Q9HAW0 419 aa14.55□□□□□ -0.08
CBWD1-225ENST00000616944 GIMAP2Q9UG22 337 aa14.55□□□□□ -0.08
CBWD1-225ENST00000616944 SNX7Q9UNH6 387 aa14.55□□□□□ -0.08
CBWD1-225ENST00000616944 KLHL20Q9Y2M5 609 aa14.55□□□□□ -0.08
CBWD1-225ENST00000616944 FEZF1A0PJY2 475 aa14.55□□□□□ -0.08
CBWD1-225ENST00000616944 MAGEB17A8MXT2 336 aa14.55□□□□□ -0.08
CBWD1-225ENST00000616944 PROB1E7EW31 1015 aa14.55□□□□□ -0.08
CBWD1-225ENST00000616944 E9PBE3 544 aa14.55□□□□□ -0.08
CBWD1-225ENST00000616944 FOXE1O00358 373 aaPredicted RBP14.55□□□□□ -0.08
CBWD1-225ENST00000616944 HAT1O14929 419 aa14.55□□□□□ -0.08
CBWD1-225ENST00000616944 B4GAT1O43505 415 aa14.55□□□□□ -0.08
CBWD1-225ENST00000616944 LCMT2O60294 686 aaKnown RBP14.55□□□□□ -0.08
CBWD1-225ENST00000616944 KLHL41O60662 606 aa14.55□□□□□ -0.08
CBWD1-225ENST00000616944 LRP3O75074 770 aa14.55□□□□□ -0.08
CBWD1-225ENST00000616944 VPS4BO75351 444 aa14.55□□□□□ -0.08
CBWD1-225ENST00000616944 CKMT1AP12532 417 aa14.55□□□□□ -0.08
CBWD1-225ENST00000616944 AMD1P17707 334 aa14.55□□□□□ -0.08
CBWD1-225ENST00000616944 ALDH4A1P30038 563 aa14.55□□□□□ -0.08
CBWD1-225ENST00000616944 SCTRP47872 440 aa14.55□□□□□ -0.08
CBWD1-225ENST00000616944 OR1D5P58170 312 aa14.55□□□□□ -0.08
CBWD1-225ENST00000616944 GPLD1P80108 840 aa14.55□□□□□ -0.08
CBWD1-225ENST00000616944 HMGCS1Q01581 520 aa14.55□□□□□ -0.08
CBWD1-225ENST00000616944 RELAQ04206 551 aa14.55□□□□□ -0.08
CBWD1-225ENST00000616944 HIST2H2ACQ16777 129 aaPredicted RBP14.55□□□□□ -0.08
CBWD1-225ENST00000616944 SGO1Q5FBB7 561 aa14.55□□□□□ -0.08
CBWD1-225ENST00000616944 FCRL6Q6DN72 434 aa14.55□□□□□ -0.08
CBWD1-225ENST00000616944 HIST2H2AA3Q6FI13 130 aa14.55□□□□□ -0.08
CBWD1-225ENST00000616944 C6orf89Q6UWU4 347 aa14.55□□□□□ -0.08
CBWD1-225ENST00000616944 GBP7Q8N8V2 638 aaPredicted RBP14.55□□□□□ -0.08
CBWD1-225ENST00000616944 TUBGCP3Q96CW5 907 aa14.55□□□□□ -0.08
CBWD1-225ENST00000616944 MTFMTQ96DP5 389 aaKnown RBP14.55□□□□□ -0.08
CBWD1-225ENST00000616944 NMUR2Q9GZQ4 415 aa14.55□□□□□ -0.08
CBWD1-225ENST00000616944 ZNF385DQ9H6B1 395 aa14.55□□□□□ -0.08
CBWD1-225ENST00000616944 DMRT3Q9NQL9 472 aa14.55□□□□□ -0.08
CBWD1-225ENST00000616944 RXFP3Q9NSD7 469 aa14.55□□□□□ -0.08
CBWD1-225ENST00000616944 RIC8BQ9NVN3 520 aa14.55□□□□□ -0.08
CBWD1-225ENST00000616944 MN1Q10571 1320 aaPredicted RBP14.54□□□□□ -0.08
CBWD1-225ENST00000616944 SLC28A1O00337 649 aa14.54□□□□□ -0.08
CBWD1-225ENST00000616944 DCTN3O75935 186 aa14.54□□□□□ -0.08
CBWD1-225ENST00000616944 RSL1D1O76021 490 aaKnown RBP14.54□□□□□ -0.08
CBWD1-225ENST00000616944 ETHE1O95571 254 aa14.54□□□□□ -0.08
CBWD1-225ENST00000616944 SERPINA6P08185 405 aa14.54□□□□□ -0.08
CBWD1-225ENST00000616944 ALDOCP09972 364 aaKnown RBP14.54□□□□□ -0.08
CBWD1-225ENST00000616944 PCNAP12004 261 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms