RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 FPR1P21462 350 aa12.76□□□□□ -0.37
MSH6-214ENST00000616033 ZNF45Q02386 682 aa12.76□□□□□ -0.37
MSH6-214ENST00000616033 KDM4DQ6B0I6 523 aa12.76□□□□□ -0.37
MSH6-214ENST00000616033 SNX20Q7Z614 316 aa12.76□□□□□ -0.37
MSH6-214ENST00000616033 ABI3BPQ7Z7G0 1075 aa12.76□□□□□ -0.37
MSH6-214ENST00000616033 TSPYL5Q86VY4 417 aaPredicted RBP12.76□□□□□ -0.37
MSH6-214ENST00000616033 TP53INP1Q96A56 240 aa12.76□□□□□ -0.37
MSH6-214ENST00000616033 RETREG1Q9H6L5 497 aa12.76□□□□□ -0.37
MSH6-214ENST00000616033 NAALAD2Q9Y3Q0 740 aa12.76□□□□□ -0.37
MSH6-214ENST00000616033 PCDHGA6Q9Y5G7 932 aa12.76□□□□□ -0.37
MSH6-214ENST00000616033 FAM227AF5H4B4 570 aa12.76□□□□□ -0.37
MSH6-214ENST00000616033 DNAJB5O75953 348 aa12.76□□□□□ -0.37
MSH6-214ENST00000616033 IL6P05231 212 aa12.76□□□□□ -0.37
MSH6-214ENST00000616033 PTPN2P17706 415 aa12.76□□□□□ -0.37
MSH6-214ENST00000616033 KRT6CP48668 564 aa12.76□□□□□ -0.37
MSH6-214ENST00000616033 UGT2B15P54855 530 aa12.76□□□□□ -0.37
MSH6-214ENST00000616033 HOXC5Q00444 222 aa12.76□□□□□ -0.37
MSH6-214ENST00000616033 SPIBQ01892 262 aa12.76□□□□□ -0.37
MSH6-214ENST00000616033 ZNF33AQ06730 810 aa12.76□□□□□ -0.37
MSH6-214ENST00000616033 LRRC74AQ0VAA2 488 aa12.76□□□□□ -0.37
MSH6-214ENST00000616033 IL18R1Q13478 541 aa12.76□□□□□ -0.37
MSH6-214ENST00000616033 SPATS1Q496A3 300 aa12.76□□□□□ -0.37
MSH6-214ENST00000616033 NADSYN1Q6IA69 706 aa12.76□□□□□ -0.37
MSH6-214ENST00000616033 TMPRSS11AQ6ZMR5 421 aa12.76□□□□□ -0.37
MSH6-214ENST00000616033 BCDIN3DQ7Z5W3 292 aaKnown RBP12.76□□□□□ -0.37
MSH6-214ENST00000616033 LACC1Q8IV20 430 aa12.76□□□□□ -0.37
MSH6-214ENST00000616033 GPR65Q8IYL9 337 aa12.76□□□□□ -0.37
MSH6-214ENST00000616033 CHPFQ8IZ52 775 aa12.76□□□□□ -0.37
MSH6-214ENST00000616033 SLC34A3Q8N130 599 aa12.76□□□□□ -0.37
MSH6-214ENST00000616033 SLC5A8Q8N695 610 aa12.76□□□□□ -0.37
MSH6-214ENST00000616033 LSMEM1Q8N8F7 131 aa12.76□□□□□ -0.37
MSH6-214ENST00000616033 ST13P5Q8NFI4 369 aaPredicted RBP12.76□□□□□ -0.37
MSH6-214ENST00000616033 MYDGFQ969H8 173 aa12.76□□□□□ -0.37
MSH6-214ENST00000616033 COPS8Q99627 209 aa12.76□□□□□ -0.37
MSH6-214ENST00000616033 ATG10Q9H0Y0 220 aa12.76□□□□□ -0.37
MSH6-214ENST00000616033 BRD7Q9NPI1 651 aa12.76□□□□□ -0.37
MSH6-214ENST00000616033 C11orf16Q9NQ32 467 aa12.76□□□□□ -0.37
MSH6-214ENST00000616033 SPASTQ9UBP0 616 aa12.76□□□□□ -0.37
MSH6-214ENST00000616033 BRCA1P38398 1863 aaKnown RBP12.76□□□□□ -0.37
MSH6-214ENST00000616033 CCDC182A6NF36 153 aa12.75□□□□□ -0.37
MSH6-214ENST00000616033 LRRTM2O43300 516 aa12.75□□□□□ -0.37
MSH6-214ENST00000616033 RHOQP17081 205 aa12.75□□□□□ -0.37
MSH6-214ENST00000616033 OGNP20774 298 aaKnown RBP12.75□□□□□ -0.37
MSH6-214ENST00000616033 LPOP22079 712 aaPredicted RBP12.75□□□□□ -0.37
MSH6-214ENST00000616033 RGS6P49758 472 aa12.75□□□□□ -0.37
MSH6-214ENST00000616033 MFSD10Q14728 455 aa12.75□□□□□ -0.37
MSH6-214ENST00000616033 CCDC117Q8IWD4 279 aaPredicted RBP12.75□□□□□ -0.37
MSH6-214ENST00000616033 LKAAEAR1Q8TD35 194 aa12.75□□□□□ -0.37
MSH6-214ENST00000616033 SIPA1Q96FS4 1042 aa12.75□□□□□ -0.37
MSH6-214ENST00000616033 ST6GAL2Q96JF0 529 aa12.75□□□□□ -0.37
MSH6-214ENST00000616033 SEPT5Q99719 369 aaPredicted RBP12.75□□□□□ -0.37
MSH6-214ENST00000616033 CLPBQ9H078 707 aa12.75□□□□□ -0.37
MSH6-214ENST00000616033 ATP13A1Q9HD20 1204 aa12.75□□□□□ -0.37
MSH6-214ENST00000616033 FKBP14Q9NWM8 211 aa12.75□□□□□ -0.37
MSH6-214ENST00000616033 MARCH2Q9P0N8 246 aa12.75□□□□□ -0.37
MSH6-214ENST00000616033 PRKAB1Q9Y478 270 aa12.75□□□□□ -0.37
MSH6-214ENST00000616033 MAU2Q9Y6X3 613 aa12.75□□□□□ -0.37
MSH6-214ENST00000616033 RRN3P2A6NIE6 340 aa12.75□□□□□ -0.37
MSH6-214ENST00000616033 CLDN24A6NM45 220 aa12.75□□□□□ -0.37
MSH6-214ENST00000616033 TBKBP1A7MCY6 615 aa12.75□□□□□ -0.37
MSH6-214ENST00000616033 H3BQ06 376 aaPredicted RBP12.75□□□□□ -0.37
MSH6-214ENST00000616033 J3KTA2 159 aa12.75□□□□□ -0.37
MSH6-214ENST00000616033 TNFRSF11BO00300 401 aa12.75□□□□□ -0.37
MSH6-214ENST00000616033 ALX3O95076 343 aa12.75□□□□□ -0.37
MSH6-214ENST00000616033 SOX14O95416 240 aa12.75□□□□□ -0.37
MSH6-214ENST00000616033 PDYNP01213 254 aa12.75□□□□□ -0.37
MSH6-214ENST00000616033 CLEC2LP0C7M8 214 aa12.75□□□□□ -0.37
MSH6-214ENST00000616033 ITGAMP11215 1152 aa12.75□□□□□ -0.37
MSH6-214ENST00000616033 KDELR2P33947 212 aa12.75□□□□□ -0.37
MSH6-214ENST00000616033 CAV3P56539 151 aa12.75□□□□□ -0.37
MSH6-214ENST00000616033 STARD3Q14849 445 aa12.75□□□□□ -0.37
MSH6-214ENST00000616033 TYSND1Q2T9J0 566 aa12.75□□□□□ -0.37
MSH6-214ENST00000616033 PROX2Q3B8N5 592 aa12.75□□□□□ -0.37
MSH6-214ENST00000616033 MANEALQ5VSG8 457 aa12.75□□□□□ -0.37
MSH6-214ENST00000616033 CAPN13Q6MZZ7 669 aaPredicted RBP12.75□□□□□ -0.37
MSH6-214ENST00000616033 UBQLNLQ8IYU4 475 aa12.75□□□□□ -0.37
MSH6-214ENST00000616033 TMEM86AQ8N2M4 240 aa12.75□□□□□ -0.37
MSH6-214ENST00000616033 BRI3BPQ8WY22 251 aa12.75□□□□□ -0.37
MSH6-214ENST00000616033 MTERF1Q99551 399 aaKnown RBP12.75□□□□□ -0.37
MSH6-214ENST00000616033 MGLLQ99685 303 aa12.75□□□□□ -0.37
MSH6-214ENST00000616033 ACAT2Q9BWD1 397 aa12.75□□□□□ -0.37
MSH6-214ENST00000616033 ASPNQ9BXN1 380 aa12.75□□□□□ -0.37
MSH6-214ENST00000616033 IL1RAPQ9NPH3 570 aa12.75□□□□□ -0.37
MSH6-214ENST00000616033 NDRG4Q9ULP0 352 aaKnown RBP12.75□□□□□ -0.37
MSH6-214ENST00000616033 TBC1D24Q9ULP9 559 aa12.75□□□□□ -0.37
MSH6-214ENST00000616033 HNRNPCL2B2RXH8 293 aa12.75□□□□□ -0.37
MSH6-214ENST00000616033 KPNA5O15131 536 aa12.75□□□□□ -0.37
MSH6-214ENST00000616033 AP2A2O94973 939 aa12.75□□□□□ -0.37
MSH6-214ENST00000616033 GBAP04062 536 aa12.75□□□□□ -0.37
MSH6-214ENST00000616033 EPB42P16452 691 aa12.75□□□□□ -0.37
MSH6-214ENST00000616033 GKP32189 559 aa12.75□□□□□ -0.37
MSH6-214ENST00000616033 PBX3P40426 434 aa12.75□□□□□ -0.37
MSH6-214ENST00000616033 IL12RB1P42701 662 aa12.75□□□□□ -0.37
MSH6-214ENST00000616033 RUNX1T1Q06455 604 aa12.75□□□□□ -0.37
MSH6-214ENST00000616033 PYDC2Q56P42 97 aa12.75□□□□□ -0.37
MSH6-214ENST00000616033 SLC46A3Q7Z3Q1 461 aa12.75□□□□□ -0.37
MSH6-214ENST00000616033 PHC2Q8IXK0 858 aa12.75□□□□□ -0.37
MSH6-214ENST00000616033 THEM5Q8N1Q8 247 aa12.75□□□□□ -0.37
MSH6-214ENST00000616033 GPR156Q8NFN8 814 aa12.75□□□□□ -0.37
MSH6-214ENST00000616033 NPLOC4Q8TAT6 608 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms