RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 TRAPPC5Q8IUR0 188 aa13.41□□□□□ -0.26
CHD1-212ENST00000614616 OR5T3Q8NGG3 340 aa13.41□□□□□ -0.26
CHD1-212ENST00000614616 TAS2R8Q9NYW2 309 aa13.41□□□□□ -0.26
CHD1-212ENST00000614616 NEDD8-MDP1E9PL57 170 aa13.4□□□□□ -0.26
CHD1-212ENST00000614616 GPR182O15218 404 aa13.4□□□□□ -0.26
CHD1-212ENST00000614616 CNTN5O94779 1100 aa13.4□□□□□ -0.26
CHD1-212ENST00000614616 GTF2F2P13984 249 aa13.4□□□□□ -0.26
CHD1-212ENST00000614616 CHRNB2P17787 502 aa13.4□□□□□ -0.26
CHD1-212ENST00000614616 POLR2CP19387 275 aaPredicted RBP13.4□□□□□ -0.26
CHD1-212ENST00000614616 C22orf42Q6IC83 251 aa13.4□□□□□ -0.26
CHD1-212ENST00000614616 TSPYL5Q86VY4 417 aaPredicted RBP13.4□□□□□ -0.26
CHD1-212ENST00000614616 CNOT9Q92600 299 aaKnown RBP13.4□□□□□ -0.26
CHD1-212ENST00000614616 UPF1Q92900 1129 aaKnown RBP eCLIP13.4□□□□□ -0.26
CHD1-212ENST00000614616 MFSD3Q96ES6 412 aa13.4□□□□□ -0.26
CHD1-212ENST00000614616 RETREG1Q9H6L5 497 aa13.4□□□□□ -0.26
CHD1-212ENST00000614616 ZNF358Q9NW07 568 aa13.4□□□□□ -0.26
CHD1-212ENST00000614616 TGFB1I1O43294 461 aa13.4□□□□□ -0.26
CHD1-212ENST00000614616 H1F0P07305 194 aaKnown RBP13.4□□□□□ -0.26
CHD1-212ENST00000614616 LAMP2P13473 410 aa13.4□□□□□ -0.26
CHD1-212ENST00000614616 LEPRP48357 1165 aaKnown RBP13.4□□□□□ -0.26
CHD1-212ENST00000614616 RPS14P62263 151 aaKnown RBP13.4□□□□□ -0.26
CHD1-212ENST00000614616 LAPTM5Q13571 262 aa13.4□□□□□ -0.26
CHD1-212ENST00000614616 TOR1AIP1Q5JTV8 583 aa13.4□□□□□ -0.26
CHD1-212ENST00000614616 FOXRED2Q8IWF2 684 aa13.4□□□□□ -0.26
CHD1-212ENST00000614616 PEX13Q92968 403 aa13.4□□□□□ -0.26
CHD1-212ENST00000614616 SULT4A1Q9BR01 284 aa13.4□□□□□ -0.26
CHD1-212ENST00000614616 GLOD4Q9HC38 313 aa13.4□□□□□ -0.26
CHD1-212ENST00000614616 TSPAN15O95858 294 aa13.4□□□□□ -0.26
CHD1-212ENST00000614616 CAP2P40123 477 aa13.4□□□□□ -0.26
CHD1-212ENST00000614616 GLUD2P49448 558 aa13.4□□□□□ -0.26
CHD1-212ENST00000614616 TPMTP51580 245 aa13.4□□□□□ -0.26
CHD1-212ENST00000614616 PYROXD2Q8N2H3 581 aa13.4□□□□□ -0.26
CHD1-212ENST00000614616 DNERQ8NFT8 737 aa13.4□□□□□ -0.26
CHD1-212ENST00000614616 ADAMTS16Q8TE57 1224 aa13.4□□□□□ -0.26
CHD1-212ENST00000614616 MALSU1Q96EH3 234 aa13.4□□□□□ -0.26
CHD1-212ENST00000614616 TWNKQ96RR1 684 aa13.4□□□□□ -0.26
CHD1-212ENST00000614616 EBPLQ9BY08 206 aa13.4□□□□□ -0.26
CHD1-212ENST00000614616 LCMT2O60294 686 aaKnown RBP13.4□□□□□ -0.26
CHD1-212ENST00000614616 SPDEFO95238 335 aa13.4□□□□□ -0.26
CHD1-212ENST00000614616 RFC2P35250 354 aa13.4□□□□□ -0.26
CHD1-212ENST00000614616 CASP3P42574 277 aa13.4□□□□□ -0.26
CHD1-212ENST00000614616 CLCN3P51790 818 aa13.4□□□□□ -0.26
CHD1-212ENST00000614616 PROX2Q3B8N5 592 aa13.4□□□□□ -0.26
CHD1-212ENST00000614616 LRRC37A5PQ49AS3 106 aa13.4□□□□□ -0.26
CHD1-212ENST00000614616 C14orf28Q4W4Y0 310 aa13.4□□□□□ -0.26
CHD1-212ENST00000614616 CAND1Q86VP6 1230 aaKnown RBP13.4□□□□□ -0.26
CHD1-212ENST00000614616 MMP28Q9H239 520 aa13.4□□□□□ -0.26
CHD1-212ENST00000614616 NTN4Q9HB63 628 aa13.4□□□□□ -0.26
CHD1-212ENST00000614616 BPIFA1Q9NP55 256 aa13.4□□□□□ -0.26
CHD1-212ENST00000614616 TMPRSS4Q9NRS4 437 aa13.4□□□□□ -0.26
CHD1-212ENST00000614616 NUFIP1Q9UHK0 495 aaKnown RBP13.4□□□□□ -0.26
CHD1-212ENST00000614616 DUOX1Q9NRD9 1551 aa13.4□□□□□ -0.26
CHD1-212ENST00000614616 MOXD2PA6NHM9 499 aa13.4□□□□□ -0.26
CHD1-212ENST00000614616 PRAMEF2O60811 474 aa13.4□□□□□ -0.26
CHD1-212ENST00000614616 KHKP50053 298 aa13.4□□□□□ -0.26
CHD1-212ENST00000614616 WNT3AP56704 352 aa13.4□□□□□ -0.26
CHD1-212ENST00000614616 MAP1SQ66K74 1059 aaPredicted RBP13.4□□□□□ -0.26
CHD1-212ENST00000614616 KIAA1161Q6NSJ0 714 aa13.4□□□□□ -0.26
CHD1-212ENST00000614616 LGI2Q8N0V4 545 aa13.4□□□□□ -0.26
CHD1-212ENST00000614616 TFB2MQ9H5Q4 396 aaKnown RBP13.4□□□□□ -0.26
CHD1-212ENST00000614616 VRTNQ9H8Y1 702 aa13.4□□□□□ -0.26
CHD1-212ENST00000614616 MYNNQ9NPC7 610 aa13.4□□□□□ -0.26
CHD1-212ENST00000614616 ZMAT5Q9UDW3 170 aaKnown RBP13.4□□□□□ -0.26
CHD1-212ENST00000614616 HIF3AQ9Y2N7 669 aa13.4□□□□□ -0.26
CHD1-212ENST00000614616 GLYATL1P3A0A0U1RQE8 302 aa13.4□□□□□ -0.26
CHD1-212ENST00000614616 A0A1W2PRQ8 180 aa13.4□□□□□ -0.26
CHD1-212ENST00000614616 NUPL2O15504 423 aaKnown RBP13.4□□□□□ -0.26
CHD1-212ENST00000614616 MFSD11O43934 449 aa13.4□□□□□ -0.26
CHD1-212ENST00000614616 ANXA4P09525 319 aaPredicted RBP13.4□□□□□ -0.26
CHD1-212ENST00000614616 EDNRAP25101 427 aa13.4□□□□□ -0.26
CHD1-212ENST00000614616 SLC1A2P43004 574 aa13.4□□□□□ -0.26
CHD1-212ENST00000614616 CXCR3P49682 368 aa13.4□□□□□ -0.26
CHD1-212ENST00000614616 HMGN3Q15651 99 aa13.4□□□□□ -0.26
CHD1-212ENST00000614616 GTF3C2Q8WUA4 911 aaPredicted RBP13.4□□□□□ -0.26
CHD1-212ENST00000614616 CXorf49A8MYA2 514 aaPredicted RBP13.39□□□□□ -0.27
CHD1-212ENST00000614616 ALX3O95076 343 aa13.39□□□□□ -0.27
CHD1-212ENST00000614616 OAZ2O95190 189 aa13.39□□□□□ -0.27
CHD1-212ENST00000614616 HSDL2Q6YN16 418 aa13.39□□□□□ -0.27
CHD1-212ENST00000614616 DGLUCYQ7Z3D6 616 aa13.39□□□□□ -0.27
CHD1-212ENST00000614616 AZIN2Q96A70 460 aa13.39□□□□□ -0.27
CHD1-212ENST00000614616 DIP2CQ9Y2E4 1556 aa13.39□□□□□ -0.27
CHD1-212ENST00000614616 TMEM98Q9Y2Y6 226 aa13.39□□□□□ -0.27
CHD1-212ENST00000614616 AQP9O43315 295 aa13.39□□□□□ -0.27
CHD1-212ENST00000614616 CDK1P06493 297 aa13.39□□□□□ -0.27
CHD1-212ENST00000614616 PRPS1L1P21108 318 aa13.39□□□□□ -0.27
CHD1-212ENST00000614616 HTR1EP28566 365 aa13.39□□□□□ -0.27
CHD1-212ENST00000614616 MECP2P51608 486 aaKnown RBP13.39□□□□□ -0.27
CHD1-212ENST00000614616 FLI1Q01543 452 aaPredicted RBP13.39□□□□□ -0.27
CHD1-212ENST00000614616 SNTB2Q13425 540 aaKnown RBP13.39□□□□□ -0.27
CHD1-212ENST00000614616 ZBTB45Q96K62 511 aaPredicted RBP13.39□□□□□ -0.27
CHD1-212ENST00000614616 SECISBP2Q96T21 854 aaKnown RBP13.39□□□□□ -0.27
CHD1-212ENST00000614616 AGO3Q9H9G7 860 aaKnown RBP13.39□□□□□ -0.27
CHD1-212ENST00000614616 NLKQ9UBE8 527 aa13.39□□□□□ -0.27
CHD1-212ENST00000614616 NOCTQ9UK39 431 aaKnown RBP13.39□□□□□ -0.27
CHD1-212ENST00000614616 C2orf92A0A1B0GVN3 265 aa13.39□□□□□ -0.27
CHD1-212ENST00000614616 IL1BP01584 269 aa13.39□□□□□ -0.27
CHD1-212ENST00000614616 CA5AP35218 305 aa13.39□□□□□ -0.27
CHD1-212ENST00000614616 MAGEA11P43364 429 aa13.39□□□□□ -0.27
CHD1-212ENST00000614616 PIGFQ07326 219 aa13.39□□□□□ -0.27
CHD1-212ENST00000614616 GPR19Q15760 415 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms