RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 OR2T11Q8NH01 316 aa21.27■□□□□ 0.99
POLR2J3-220ENST00000613744 JPH3Q8WXH2 748 aaPredicted RBP21.27■□□□□ 0.99
POLR2J3-220ENST00000613744 PEX13Q92968 403 aa21.27■□□□□ 0.99
POLR2J3-220ENST00000613744 EGLN2Q96KS0 407 aa21.27■□□□□ 0.99
POLR2J3-220ENST00000613744 SLC25A51Q9H1U9 297 aa21.27■□□□□ 0.99
POLR2J3-220ENST00000613744 ZFP14Q9HCL3 533 aa21.27■□□□□ 0.99
POLR2J3-220ENST00000613744 ADPRHL2Q9NX46 363 aa21.27■□□□□ 0.99
POLR2J3-220ENST00000613744 ZMYM5Q9UJ78 669 aa21.27■□□□□ 0.99
POLR2J3-220ENST00000613744 LSM7Q9UK45 103 aaKnown RBP21.27■□□□□ 0.99
POLR2J3-220ENST00000613744 FBXO10Q9UK96 956 aa21.27■□□□□ 0.99
POLR2J3-220ENST00000613744 WNT6Q9Y6F9 365 aa21.27■□□□□ 0.99
POLR2J3-220ENST00000613744 SUPT3HB4E1H0 165 aa21.26■□□□□ 0.99
POLR2J3-220ENST00000613744 ACSL4O60488 711 aa21.26■□□□□ 0.99
POLR2J3-220ENST00000613744 SLC6A4P31645 630 aa21.26■□□□□ 0.99
POLR2J3-220ENST00000613744 MAGEA2P43356 314 aa21.26■□□□□ 0.99
POLR2J3-220ENST00000613744 SLC15A1P46059 708 aa21.26■□□□□ 0.99
POLR2J3-220ENST00000613744 ARHGDIAP52565 204 aa21.26■□□□□ 0.99
POLR2J3-220ENST00000613744 RACK1P63244 317 aaKnown RBP21.26■□□□□ 0.99
POLR2J3-220ENST00000613744 GALNT3Q14435 633 aa21.26■□□□□ 0.99
POLR2J3-220ENST00000613744 CPZQ66K79 652 aa21.26■□□□□ 0.99
POLR2J3-220ENST00000613744 LAIR1Q6GTX8 287 aa21.26■□□□□ 0.99
POLR2J3-220ENST00000613744 SLC46A3Q7Z3Q1 461 aa21.26■□□□□ 0.99
POLR2J3-220ENST00000613744 CCDC190Q86UF4 302 aa21.26■□□□□ 0.99
POLR2J3-220ENST00000613744 CIR1Q86X95 450 aaPredicted RBP21.26■□□□□ 0.99
POLR2J3-220ENST00000613744 RAB43Q86YS6 212 aa21.26■□□□□ 0.99
POLR2J3-220ENST00000613744 RYBPQ8N488 228 aaPredicted RBP21.26■□□□□ 0.99
POLR2J3-220ENST00000613744 C1orf74Q96LT6 269 aa21.26■□□□□ 0.99
POLR2J3-220ENST00000613744 RPRD1AQ96P16 312 aaPredicted RBP21.26■□□□□ 0.99
POLR2J3-220ENST00000613744 PITX2Q99697 317 aa21.26■□□□□ 0.99
POLR2J3-220ENST00000613744 RBM22Q9NW64 420 aaKnown RBP eCLIP21.26■□□□□ 0.99
POLR2J3-220ENST00000613744 NEU3Q9UQ49 428 aa21.26■□□□□ 0.99
POLR2J3-220ENST00000613744 PRELID1Q9Y255 219 aa21.26■□□□□ 0.99
POLR2J3-220ENST00000613744 NUP210Q8TEM1 1887 aaPredicted RBP21.26■□□□□ 0.99
POLR2J3-220ENST00000613744 FAM220BPB1ANY3 271 aa21.25■□□□□ 0.99
POLR2J3-220ENST00000613744 CCRL2O00421 344 aa21.25■□□□□ 0.99
POLR2J3-220ENST00000613744 FGF10O15520 208 aaPredicted RBP21.25■□□□□ 0.99
POLR2J3-220ENST00000613744 PGLSO95336 258 aa21.25■□□□□ 0.99
POLR2J3-220ENST00000613744 LCKP06239 509 aa21.25■□□□□ 0.99
POLR2J3-220ENST00000613744 TIAL1Q01085 375 aaKnown RBP eCLIP21.25■□□□□ 0.99
POLR2J3-220ENST00000613744 ELP6Q0PNE2 266 aa21.25■□□□□ 0.99
POLR2J3-220ENST00000613744 SMAD2Q15796 467 aaKnown RBP21.25■□□□□ 0.99
POLR2J3-220ENST00000613744 CCNJQ5T5M9 372 aa21.25■□□□□ 0.99
POLR2J3-220ENST00000613744 FBXL22Q6P050 247 aa21.25■□□□□ 0.99
POLR2J3-220ENST00000613744 CYP4Z1Q86W10 505 aa21.25■□□□□ 0.99
POLR2J3-220ENST00000613744 PYCR2Q96C36 320 aa21.25■□□□□ 0.99
POLR2J3-220ENST00000613744 ZNF419Q96HQ0 510 aaPredicted RBP21.25■□□□□ 0.99
POLR2J3-220ENST00000613744 RIBC2Q9H4K1 309 aa21.25■□□□□ 0.99
POLR2J3-220ENST00000613744 TAS2R9Q9NYW1 312 aa21.25■□□□□ 0.99
POLR2J3-220ENST00000613744 RNF112Q9ULX5 631 aa21.25■□□□□ 0.99
POLR2J3-220ENST00000613744 VCANP13611 3396 aa21.25■□□□□ 0.99
POLR2J3-220ENST00000613744 DBTP11182 482 aaKnown RBP21.25■□□□□ 0.99
POLR2J3-220ENST00000613744 HOXC13P31276 330 aa21.25■□□□□ 0.99
POLR2J3-220ENST00000613744 IFNA8P32881 189 aa21.25■□□□□ 0.99
POLR2J3-220ENST00000613744 TIE1P35590 1138 aa21.25■□□□□ 0.99
POLR2J3-220ENST00000613744 TGFBR1P36897 503 aa21.25■□□□□ 0.99
POLR2J3-220ENST00000613744 LIPAP38571 399 aa21.25■□□□□ 0.99
POLR2J3-220ENST00000613744 MANEALQ5VSG8 457 aa21.25■□□□□ 0.99
POLR2J3-220ENST00000613744 NEK5Q6P3R8 708 aa21.25■□□□□ 0.99
POLR2J3-220ENST00000613744 ZNF549Q6P9A3 640 aa21.25■□□□□ 0.99
POLR2J3-220ENST00000613744 VITQ6UXI7 678 aa21.25■□□□□ 0.99
POLR2J3-220ENST00000613744 ZNF517Q6ZMY9 492 aaPredicted RBP21.25■□□□□ 0.99
POLR2J3-220ENST00000613744 Q6ZNB5 142 aa21.25■□□□□ 0.99
POLR2J3-220ENST00000613744 HTR3DQ70Z44 454 aa21.25■□□□□ 0.99
POLR2J3-220ENST00000613744 NLGN4XQ8N0W4 816 aa21.25■□□□□ 0.99
POLR2J3-220ENST00000613744 CFAP52Q8N1V2 620 aa21.25■□□□□ 0.99
POLR2J3-220ENST00000613744 BEND7Q8N7W2 519 aaPredicted RBP21.25■□□□□ 0.99
POLR2J3-220ENST00000613744 OR6P1Q8NGX9 317 aa21.25■□□□□ 0.99
POLR2J3-220ENST00000613744 DNAJB8Q8NHS0 232 aa21.25■□□□□ 0.99
POLR2J3-220ENST00000613744 IGSF8Q969P0 613 aa21.25■□□□□ 0.99
POLR2J3-220ENST00000613744 RNF170Q96K19 258 aa21.25■□□□□ 0.99
POLR2J3-220ENST00000613744 PHF7Q9BWX1 381 aaPredicted RBP21.25■□□□□ 0.99
POLR2J3-220ENST00000613744 IRF2BPLQ9H1B7 796 aa21.25■□□□□ 0.99
POLR2J3-220ENST00000613744 A0A1B0GTL3 188 aa21.24■□□□□ 0.99
POLR2J3-220ENST00000613744 ANKRD28O15084 1053 aa21.24■□□□□ 0.99
POLR2J3-220ENST00000613744 MUSKO15146 869 aa21.24■□□□□ 0.99
POLR2J3-220ENST00000613744 SEMA3DO95025 777 aa21.24■□□□□ 0.99
POLR2J3-220ENST00000613744 TACR2P21452 398 aa21.24■□□□□ 0.99
POLR2J3-220ENST00000613744 SOX6P35712 828 aa21.24■□□□□ 0.99
POLR2J3-220ENST00000613744 SGSHP51688 502 aa21.24■□□□□ 0.99
POLR2J3-220ENST00000613744 ACVR1Q04771 509 aa21.24■□□□□ 0.99
POLR2J3-220ENST00000613744 CEP78Q5JTW2 689 aa21.24■□□□□ 0.99
POLR2J3-220ENST00000613744 SNAP47Q5SQN1 464 aa21.24■□□□□ 0.99
POLR2J3-220ENST00000613744 MLIPQ5VWP3 458 aa21.24■□□□□ 0.99
POLR2J3-220ENST00000613744 ATG9BQ674R7 924 aa21.24■□□□□ 0.99
POLR2J3-220ENST00000613744 TPGS1Q6ZTW0 290 aa21.24■□□□□ 0.99
POLR2J3-220ENST00000613744 SPATC1Q76KD6 591 aa21.24■□□□□ 0.99
POLR2J3-220ENST00000613744 DET1Q7L5Y6 550 aa21.24■□□□□ 0.99
POLR2J3-220ENST00000613744 SPNS2Q8IVW8 549 aa21.24■□□□□ 0.99
POLR2J3-220ENST00000613744 PYURFQ96I23 114 aa21.24■□□□□ 0.99
POLR2J3-220ENST00000613744 PCTPQ9UKL6 214 aa21.24■□□□□ 0.99
POLR2J3-220ENST00000613744 ANKRD36A6QL64 1941 aa21.24■□□□□ 0.99
POLR2J3-220ENST00000613744 F5H5T6 163 aa21.24■□□□□ 0.99
POLR2J3-220ENST00000613744 CREG1O75629 220 aa21.24■□□□□ 0.99
POLR2J3-220ENST00000613744 GADD45AP24522 165 aa21.24■□□□□ 0.99
POLR2J3-220ENST00000613744 PIK3CBP42338 1070 aa21.24■□□□□ 0.99
POLR2J3-220ENST00000613744 LIMK1P53667 647 aa21.24■□□□□ 0.99
POLR2J3-220ENST00000613744 KIAA0040Q15053 153 aa21.24■□□□□ 0.99
POLR2J3-220ENST00000613744 MRNIPQ6NTE8 343 aa21.24■□□□□ 0.99
POLR2J3-220ENST00000613744 CYP20A1Q6UW02 462 aa21.24■□□□□ 0.99
POLR2J3-220ENST00000613744 GPRIN3Q6ZVF9 776 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms