RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 CPED1A4D0V7 1026 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 SOCS2O14508 198 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 IL7RP16871 459 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 SLC6A2P23975 617 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 ELK4P28324 431 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 GNALP38405 381 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 IL31Q6EBC2 164 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 ADGRG3Q86Y34 549 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 PCSK9Q8NBP7 692 aaKnown RBP4.82□□□□□ -1.64
VPS13D-213ENST00000613099 PAPD5Q8NDF8 572 aaKnown RBP4.82□□□□□ -1.64
VPS13D-213ENST00000613099 EBF4Q9BQW3 602 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 DUSP16Q9BY84 665 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 SLC39A8Q9C0K1 460 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 SEMA3GQ9NS98 782 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 TMEM184CQ9NVA4 438 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 DZANK1Q9NVP4 752 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 VAPAQ9P0L0 249 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 TRAV6A0A075B6T7 132 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 GSG1L2A8MUP6 293 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 CAPN5O15484 640 aaPredicted RBP4.82□□□□□ -1.64
VPS13D-213ENST00000613099 KLRC4O43908 158 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 MT-CO1P00395 513 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 IFNGP01579 166 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 CD1EP15812 388 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 HMGCLP35914 325 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 RANP62826 216 aaKnown RBP4.82□□□□□ -1.64
VPS13D-213ENST00000613099 ADAM8P78325 824 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 CHRNA2Q15822 529 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 C21orf62-AS1Q17RA5 79 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 ANXA8L1Q5VT79 327 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 MILR1Q7Z6M3 343 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 ARFGAP1Q8N6T3 406 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 CAMKVQ8NCB2 501 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.82□□□□□ -1.642e-6■■■■■ 33.6
VPS13D-213ENST00000613099 ST8SIA2Q92186 375 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 SLC35C1Q96A29 364 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 MRPL4Q9BYD3 311 aaKnown RBP4.82□□□□□ -1.64
VPS13D-213ENST00000613099 NKX6-2Q9C056 277 aaPredicted RBP4.82□□□□□ -1.64
VPS13D-213ENST00000613099 POLR2J2Q9GZM3 115 aaKnown RBP4.82□□□□□ -1.64
VPS13D-213ENST00000613099 RBAKQ9NYW8 714 aaPredicted RBP4.82□□□□□ -1.64
VPS13D-213ENST00000613099 MARK1Q9P0L2 795 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 TBX20Q9UMR3 447 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 BOLA1Q9Y3E2 137 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 A0A1W2PQL4 384 aaPredicted RBP4.82□□□□□ -1.64
VPS13D-213ENST00000613099 CIDEAO60543 219 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 CDK14O94921 469 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 SERPIND1P05546 499 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 IL1R2P27930 398 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 RBP5P82980 135 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 TRAM1Q15629 374 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 BCL2L15Q5TBC7 163 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 ETFRF1Q6IPR1 90 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 NRARPQ7Z6K4 114 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 ZNF565Q8N9K5 539 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 PCDHGB7Q9Y5F8 929 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 PCDHAC2Q9Y5I4 1007 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 PTCH2Q9Y6C5 1203 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 MROH6A6NGR9 719 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 FAM86B2P0C5J1 330 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 PTPRNQ16849 979 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 USP17L2Q6R6M4 530 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 FAM180AQ6UWF9 173 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 DET1Q7L5Y6 550 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 DTX3Q8N9I9 347 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 ANKLE1Q8NAG6 615 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 PPM1MQ96MI6 270 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 TAF6LQ9Y6J9 622 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 A0A1W2PQ09 198 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 C5orf51A6NDU8 294 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 FGRP09769 529 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 SPI1P17947 270 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 SPIBQ01892 262 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 AADACL2Q6P093 401 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 NCEH1Q6PIU2 408 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 C7orf31Q8N865 590 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 ZNF248Q8NDW4 579 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 ANGPT4Q9Y264 503 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 PAPSS2O95340 614 aaPredicted RBP4.82□□□□□ -1.64
VPS13D-213ENST00000613099 GEMP55040 296 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 COQ5Q5HYK3 327 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 RAB41Q5JT25 222 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 IRAK1BP1Q5VVH5 260 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 PRAMEF13Q5VWM6 474 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 KDELC1Q6UW63 502 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 KIAA1143Q96AT1 154 aaPredicted RBP4.82□□□□□ -1.64
VPS13D-213ENST00000613099 CCNL2Q96S94 520 aaPredicted RBP4.82□□□□□ -1.64
VPS13D-213ENST00000613099 YIPF4Q9BSR8 244 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 EVA1AQ9H8M9 152 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 PDE4DIPQ5VU43 2346 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 TVP23AA6NH52 213 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 CYB561D2O14569 222 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 CYBBP04839 570 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 CRADDP78560 199 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 EIF4HQ15056 248 aaKnown RBP4.82□□□□□ -1.64
VPS13D-213ENST00000613099 BCL7AQ4VC05 210 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 PAN2Q504Q3 1202 aaKnown RBP4.82□□□□□ -1.64
VPS13D-213ENST00000613099 FAM171A1Q5VUB5 890 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 BEST3Q8N1M1 668 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 OPALINQ96PE5 141 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 ABCG5Q9H222 651 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms