RNA–Protein interactions for RNA: ENST00000604181.1

CCDC12-210, Transcript of coiled-coil domain containing 12, humanhuman

TSL 4

Gene CCDC12, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-210ENST00000604181 ANXA5P08758 320 aa15.92■□□□□ 0.14
CCDC12-210ENST00000604181 C8orf89P0DMQ9 161 aa15.92■□□□□ 0.14
CCDC12-210ENST00000604181 RPA3P35244 121 aaPredicted RBP15.92■□□□□ 0.14
CCDC12-210ENST00000604181 RPL22P35268 128 aaKnown RBP15.92■□□□□ 0.14
CCDC12-210ENST00000604181 PRDX1Q06830 199 aaKnown RBP15.92■□□□□ 0.14
CCDC12-210ENST00000604181 GARNL3Q5VVW2 1013 aa15.92■□□□□ 0.14
CCDC12-210ENST00000604181 ICE2Q659A1 982 aa15.92■□□□□ 0.14
CCDC12-210ENST00000604181 XKRXQ6PP77 449 aa15.92■□□□□ 0.14
CCDC12-210ENST00000604181 LRRC6Q86X45 466 aa15.92■□□□□ 0.14
CCDC12-210ENST00000604181 MDS2Q8NDY4 140 aa15.92■□□□□ 0.14
CCDC12-210ENST00000604181 OR9A4Q8NGU2 314 aa15.92■□□□□ 0.14
CCDC12-210ENST00000604181 MFSD3Q96ES6 412 aa15.92■□□□□ 0.14
CCDC12-210ENST00000604181 MRFAP1L1Q96HT8 127 aa15.92■□□□□ 0.14
CCDC12-210ENST00000604181 MACROD1Q9BQ69 325 aa15.92■□□□□ 0.14
CCDC12-210ENST00000604181 TUBB6Q9BUF5 446 aa15.92■□□□□ 0.14
CCDC12-210ENST00000604181 ANKRD10Q9NXR5 420 aa15.92■□□□□ 0.14
CCDC12-210ENST00000604181 ZNF148Q9UQR1 794 aa15.92■□□□□ 0.14
CCDC12-210ENST00000604181 ZNF835Q9Y2P0 537 aa15.92■□□□□ 0.14
CCDC12-210ENST00000604181 CAPN6Q9Y6Q1 641 aa15.92■□□□□ 0.14
CCDC12-210ENST00000604181 KPNA5O15131 536 aa15.91■□□□□ 0.14
CCDC12-210ENST00000604181 PRPF4O43172 522 aaKnown RBP eCLIP15.91■□□□□ 0.14
CCDC12-210ENST00000604181 PSIP1O75475 530 aaKnown RBP15.91■□□□□ 0.14
CCDC12-210ENST00000604181 SLC16A8O95907 504 aa15.91■□□□□ 0.14
CCDC12-210ENST00000604181 PNLIPRP1P54315 467 aa15.91■□□□□ 0.14
CCDC12-210ENST00000604181 TUBA3CQ13748 450 aa15.91■□□□□ 0.14
CCDC12-210ENST00000604181 TESK1Q15569 626 aa15.91■□□□□ 0.14
CCDC12-210ENST00000604181 TYSND1Q2T9J0 566 aa15.91■□□□□ 0.14
CCDC12-210ENST00000604181 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.91■□□□□ 0.14
CCDC12-210ENST00000604181 KLHL38Q2WGJ6 581 aa15.91■□□□□ 0.14
CCDC12-210ENST00000604181 ANKRD20A4Q4UJ75 823 aa15.91■□□□□ 0.14
CCDC12-210ENST00000604181 H3F3CQ6NXT2 135 aa15.91■□□□□ 0.14
CCDC12-210ENST00000604181 MTFR2Q6P444 385 aa15.91■□□□□ 0.14
CCDC12-210ENST00000604181 TUBA3EQ6PEY2 450 aa15.91■□□□□ 0.14
CCDC12-210ENST00000604181 LRRC56Q8IYG6 542 aaPredicted RBP15.91■□□□□ 0.14
CCDC12-210ENST00000604181 MPP5Q8N3R9 675 aa15.91■□□□□ 0.14
CCDC12-210ENST00000604181 SUN3Q8TAQ9 357 aa15.91■□□□□ 0.14
CCDC12-210ENST00000604181 MAGEC3Q8TD91 643 aa15.91■□□□□ 0.14
CCDC12-210ENST00000604181 ZNF480Q8WV37 535 aa15.91■□□□□ 0.14
CCDC12-210ENST00000604181 CYTH2Q99418 400 aa15.91■□□□□ 0.14
CCDC12-210ENST00000604181 KLHL1Q9NR64 748 aa15.91■□□□□ 0.14
CCDC12-210ENST00000604181 ABCF3Q9NUQ8 709 aa15.91■□□□□ 0.14
CCDC12-210ENST00000604181 CRYL1Q9Y2S2 319 aa15.91■□□□□ 0.14
CCDC12-210ENST00000604181 MRFAP1Q9Y605 127 aa15.91■□□□□ 0.14
CCDC12-210ENST00000604181 E7ENX8 843 aa15.9■□□□□ 0.14
CCDC12-210ENST00000604181 FAM227AF5H4B4 570 aa15.9■□□□□ 0.14
CCDC12-210ENST00000604181 PHF2O75151 1096 aa15.9■□□□□ 0.14
CCDC12-210ENST00000604181 VAPBO95292 243 aa15.9■□□□□ 0.14
CCDC12-210ENST00000604181 EZRP15311 586 aaKnown RBP15.9■□□□□ 0.14
CCDC12-210ENST00000604181 MGAT1P26572 445 aa15.9■□□□□ 0.14
CCDC12-210ENST00000604181 ATP5DP30049 168 aa15.9■□□□□ 0.14
CCDC12-210ENST00000604181 TAP2Q03519 686 aa15.9■□□□□ 0.14
CCDC12-210ENST00000604181 RBPJQ06330 500 aa15.9■□□□□ 0.14
CCDC12-210ENST00000604181 FAM53BQ14153 422 aa15.9■□□□□ 0.14
CCDC12-210ENST00000604181 NAA25Q14CX7 972 aa15.9■□□□□ 0.14
CCDC12-210ENST00000604181 BTBD16Q32M84 506 aa15.9■□□□□ 0.14
CCDC12-210ENST00000604181 ACER2Q5QJU3 275 aa15.9■□□□□ 0.14
CCDC12-210ENST00000604181 PLAG1Q6DJT9 500 aa15.9■□□□□ 0.14
CCDC12-210ENST00000604181 Q6ZPB1 254 aaPredicted RBP15.9■□□□□ 0.14
CCDC12-210ENST00000604181 VN1R4Q7Z5H5 301 aa15.9■□□□□ 0.14
CCDC12-210ENST00000604181 CPEB2Q7Z5Q1 589 aaKnown RBP15.9■□□□□ 0.14
CCDC12-210ENST00000604181 KIAA1328Q86T90 577 aa15.9■□□□□ 0.14
CCDC12-210ENST00000604181 CRLF3Q8IUI8 442 aa15.9■□□□□ 0.14
CCDC12-210ENST00000604181 CHERPQ8IWX8 916 aaKnown RBP15.9■□□□□ 0.14
CCDC12-210ENST00000604181 OTUD6BQ8N6M0 293 aa15.9■□□□□ 0.14
CCDC12-210ENST00000604181 GIMAP7Q8NHV1 300 aa15.9■□□□□ 0.14
CCDC12-210ENST00000604181 MTFMTQ96DP5 389 aaKnown RBP15.9■□□□□ 0.14
CCDC12-210ENST00000604181 CCDC138Q96M89 665 aa15.9■□□□□ 0.14
CCDC12-210ENST00000604181 GPR137Q96N19 417 aa15.9■□□□□ 0.14
CCDC12-210ENST00000604181 DESI2Q9BSY9 194 aa15.9■□□□□ 0.14
CCDC12-210ENST00000604181 SYBUQ9NX95 663 aa15.9■□□□□ 0.14
CCDC12-210ENST00000604181 IPO7O95373 1038 aaKnown RBP15.89■□□□□ 0.13
CCDC12-210ENST00000604181 ICAM2P13598 275 aa15.89■□□□□ 0.13
CCDC12-210ENST00000604181 CD96P40200 585 aa15.89■□□□□ 0.13
CCDC12-210ENST00000604181 HSF1Q00613 529 aa15.89■□□□□ 0.13
CCDC12-210ENST00000604181 ARHGAP19Q14CB8 494 aa15.89■□□□□ 0.13
CCDC12-210ENST00000604181 SIX1Q15475 284 aaPredicted RBP15.89■□□□□ 0.13
CCDC12-210ENST00000604181 MINDY4Q4G0A6 757 aa15.89■□□□□ 0.13
CCDC12-210ENST00000604181 SPINK14Q6IE38 97 aa15.89■□□□□ 0.13
CCDC12-210ENST00000604181 ANKRD37Q7Z713 158 aa15.89■□□□□ 0.13
CCDC12-210ENST00000604181 SLC13A5Q86YT5 568 aaPredicted RBP15.89■□□□□ 0.13
CCDC12-210ENST00000604181 SPPL2CQ8IUH8 684 aa15.89■□□□□ 0.13
CCDC12-210ENST00000604181 TMEM139Q8IV31 216 aa15.89■□□□□ 0.13
CCDC12-210ENST00000604181 SIAH3Q8IW03 269 aa15.89■□□□□ 0.13
CCDC12-210ENST00000604181 REXO1L1PQ8IX06 675 aa15.89■□□□□ 0.13
CCDC12-210ENST00000604181 RERGQ96A58 199 aaPredicted RBP15.89■□□□□ 0.13
CCDC12-210ENST00000604181 FRMD6Q96NE9 622 aa15.89■□□□□ 0.13
CCDC12-210ENST00000604181 KIFC1Q9BW19 673 aa15.89■□□□□ 0.13
CCDC12-210ENST00000604181 HCN3Q9P1Z3 774 aa15.89■□□□□ 0.13
CCDC12-210ENST00000604181 PAK5Q9P286 719 aa15.89■□□□□ 0.13
CCDC12-210ENST00000604181 MED16Q9Y2X0 877 aa15.89■□□□□ 0.13
CCDC12-210ENST00000604181 MEMO1Q9Y316 297 aa15.89■□□□□ 0.13
CCDC12-210ENST00000604181 INTS1Q8N201 2190 aaKnown RBP15.89■□□□□ 0.13
CCDC12-210ENST00000604181 TCRBV7S3A2A0A539 114 aa15.88■□□□□ 0.13
CCDC12-210ENST00000604181 ASPDHA6ND91 283 aa15.88■□□□□ 0.13
CCDC12-210ENST00000604181 NPIPA5E9PKD4 350 aa15.88■□□□□ 0.13
CCDC12-210ENST00000604181 H7BY64 318 aa15.88■□□□□ 0.13
CCDC12-210ENST00000604181 SMAPO00193 183 aa15.88■□□□□ 0.13
CCDC12-210ENST00000604181 CLDN14O95500 239 aa15.88■□□□□ 0.13
CCDC12-210ENST00000604181 ESRRAP11474 423 aaPredicted RBP15.88■□□□□ 0.13
CCDC12-210ENST00000604181 IL1RNP18510 177 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms