RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 HSPA12BQ96MM6 686 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 ZNF641Q96N77 438 aaPredicted RBP9.36□□□□□ -0.91
CSMD1-217ENST00000602723 IKZF4Q9H2S9 585 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 KLF15Q9UIH9 416 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 ZNF536O15090 1300 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 RHPN2P1A8MT19 583 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 SSX5O60225 188 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 FOXM1Q08050 763 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 ISOC1Q96CN7 298 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 SLC38A3Q99624 504 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 PARPBPQ9NWS1 579 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 IGSF9Q9P2J2 1179 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 FCF1Q9Y324 198 aaKnown RBP9.36□□□□□ -0.91
CSMD1-217ENST00000602723 H0YJX3 145 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 ZNF81P51508 661 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 DSTNP60981 165 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 LRRC73Q5JTD7 316 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 PRSS58Q8IYP2 241 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 CDK15Q96Q40 435 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 ZBTB26Q9HCK0 441 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 FBXL3Q9UKT7 428 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 ILF3Q12906 894 aaKnown RBP eCLIP9.36□□□□□ -0.91
CSMD1-217ENST00000602723 AIMP2Q13155 320 aaKnown RBP9.36□□□□□ -0.91
CSMD1-217ENST00000602723 DSG2Q14126 1118 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 KIAA1614Q5VZ46 1190 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 HSDL2Q6YN16 418 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 CEP68Q76N32 757 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 UBE2Q1Q7Z7E8 422 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 LINC00471Q8N535 108 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 RELTQ969Z4 430 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 YIPF4Q9BSR8 244 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 RAB11FIP5Q9BXF6 653 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 ADAM7Q9H2U9 754 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 PNO1Q9NRX1 252 aaKnown RBP9.36□□□□□ -0.91
CSMD1-217ENST00000602723 SLIT3O75094 1523 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 NT5C1B-RDH14C9J2C7 533 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 M0R233 179 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 BCAS2O75934 225 aaPredicted RBP9.36□□□□□ -0.91
CSMD1-217ENST00000602723 CDH11P55287 796 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 ERVK-21P61565 698 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 RHDQ02161 417 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 KCTD9Q7L273 389 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 ZNF572Q7Z3I7 529 aaPredicted RBP9.36□□□□□ -0.91
CSMD1-217ENST00000602723 GALNT6Q8NCL4 622 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 SLC5A7Q9GZV3 580 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 ENY2Q9NPA8 101 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 ZDHHC4Q9NPG8 344 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 DUS2Q9NX74 493 aaKnown RBP9.36□□□□□ -0.91
CSMD1-217ENST00000602723 GTF2IRD1Q9UHL9 959 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 FBXW11Q9UKB1 542 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 SPTBN2O15020 2390 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.36□□□□□ -0.91
CSMD1-217ENST00000602723 LRRN3E7EW58 273 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 WNT7AO00755 349 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 NDUFS4O43181 175 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 GABBR2O75899 941 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 SLITRK5O94991 958 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 RCBTB2O95199 551 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 HLA-DPB1P04440 258 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 CYP3A5P20815 502 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 GNG2P59768 71 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 SLBPQ14493 270 aaKnown RBP eCLIP9.36□□□□□ -0.91
CSMD1-217ENST00000602723 HSD17B12Q53GQ0 312 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 COQ8AQ8NI60 647 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 SMPDL3BQ92485 455 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 LRRN3Q9H3W5 708 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 USP29Q9HBJ7 922 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 ENAMQ9NRM1 1142 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 SLC35F4A4IF30 521 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 CXCR1P25024 350 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 CCL23P55773 120 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 GET4Q7L5D6 327 aaPredicted RBP9.35□□□□□ -0.91
CSMD1-217ENST00000602723 C1orf127Q8N9H9 656 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 OR5AK3PQ8NH89 298 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 SLC22A17Q8WUG5 538 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 PHB2Q99623 299 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 ITM2CQ9NQX7 267 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 C3P01024 1663 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 DUXAA6NLW8 204 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 BRCC3P46736 316 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 TAS2R39P59534 338 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 MAP2K5Q13163 448 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 UBQLN2Q9UHD9 624 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 NOCTQ9UK39 431 aaKnown RBP9.35□□□□□ -0.91
CSMD1-217ENST00000602723 ZFC3H1O60293 1989 aaKnown RBP9.35□□□□□ -0.91
CSMD1-217ENST00000602723 BCL9O00512 1426 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 NPIPA5E9PKD4 350 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 K7EPI3 171 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 PI15O43692 258 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 PPM1BO75688 479 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 FNTBP49356 437 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 MLLT6P55198 1093 aaPredicted RBP9.35□□□□□ -0.91
CSMD1-217ENST00000602723 SEC13P55735 322 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 DSC3Q14574 896 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 HDAC2Q92769 488 aaKnown RBP9.35□□□□□ -0.91
CSMD1-217ENST00000602723 PCED1BQ96HM7 432 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 HAPLN3Q96S86 360 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 CD180Q99467 661 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 PKP2Q99959 881 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 CCSER2Q9H7U1 834 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms