RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 C10orf111Q8N326 155 aa16.41■□□□□ 0.22
SHKBP1-216ENST00000598201 GALNT4Q8N4A0 578 aa16.41■□□□□ 0.22
SHKBP1-216ENST00000598201 GOLM1Q8NBJ4 401 aa16.41■□□□□ 0.22
SHKBP1-216ENST00000598201 CDC26Q8NHZ8 85 aa16.41■□□□□ 0.22
SHKBP1-216ENST00000598201 PPWD1Q96BP3 646 aaKnown RBP16.41■□□□□ 0.22
SHKBP1-216ENST00000598201 SIPA1Q96FS4 1042 aa16.41■□□□□ 0.22
SHKBP1-216ENST00000598201 EFHD1Q9BUP0 239 aa16.41■□□□□ 0.22
SHKBP1-216ENST00000598201 OSGEPL1Q9H4B0 414 aa16.41■□□□□ 0.22
SHKBP1-216ENST00000598201 EHD1Q9H4M9 534 aa16.41■□□□□ 0.22
SHKBP1-216ENST00000598201 FBRSQ9HAH7 460 aa16.41■□□□□ 0.22
SHKBP1-216ENST00000598201 PRM3Q9NNZ6 103 aa16.41■□□□□ 0.22
SHKBP1-216ENST00000598201 KCNK6Q9Y257 313 aa16.41■□□□□ 0.22
SHKBP1-216ENST00000598201 SLC17A4Q9Y2C5 497 aa16.41■□□□□ 0.22
SHKBP1-216ENST00000598201 A0A096LPI6 279 aa16.41■□□□□ 0.22
SHKBP1-216ENST00000598201 SCAMP1O15126 338 aa16.41■□□□□ 0.22
SHKBP1-216ENST00000598201 SLC35G4P0C7Q5 338 aa16.41■□□□□ 0.22
SHKBP1-216ENST00000598201 ZNF26P17031 533 aaPredicted RBP16.41■□□□□ 0.22
SHKBP1-216ENST00000598201 PSMA4P25789 261 aaKnown RBP16.41■□□□□ 0.22
SHKBP1-216ENST00000598201 GRSF1Q12849 480 aaKnown RBP eCLIP16.41■□□□□ 0.22
SHKBP1-216ENST00000598201 MLF2Q15773 248 aaPredicted RBP16.41■□□□□ 0.22
SHKBP1-216ENST00000598201 ANKRD26P1Q6NSI1 321 aa16.41■□□□□ 0.22
SHKBP1-216ENST00000598201 LCTLQ6UWM7 567 aa16.41■□□□□ 0.22
SHKBP1-216ENST00000598201 ERMP1Q7Z2K6 904 aa16.41■□□□□ 0.22
SHKBP1-216ENST00000598201 GPR180Q86V85 440 aa16.41■□□□□ 0.22
SHKBP1-216ENST00000598201 CATSPER1Q8NEC5 780 aa16.41■□□□□ 0.22
SHKBP1-216ENST00000598201 SETD7Q8WTS6 366 aaKnown RBP16.41■□□□□ 0.22
SHKBP1-216ENST00000598201 GATA6Q92908 595 aa16.41■□□□□ 0.22
SHKBP1-216ENST00000598201 BIRC7Q96CA5 298 aa16.41■□□□□ 0.22
SHKBP1-216ENST00000598201 ITCHQ96J02 903 aa16.41■□□□□ 0.22
SHKBP1-216ENST00000598201 MRGPRX1Q96LB2 322 aa16.41■□□□□ 0.22
SHKBP1-216ENST00000598201 INSM2Q96T92 566 aaPredicted RBP16.41■□□□□ 0.22
SHKBP1-216ENST00000598201 APOOQ9BUR5 198 aa16.41■□□□□ 0.22
SHKBP1-216ENST00000598201 REXO4Q9GZR2 422 aaKnown RBP16.41■□□□□ 0.22
SHKBP1-216ENST00000598201 DMRT3Q9NQL9 472 aa16.41■□□□□ 0.22
SHKBP1-216ENST00000598201 BTBD3Q9Y2F9 522 aa16.41■□□□□ 0.22
SHKBP1-216ENST00000598201 NCOR1O75376 2440 aa16.41■□□□□ 0.22
SHKBP1-216ENST00000598201 TPST1O60507 370 aa16.4■□□□□ 0.22
SHKBP1-216ENST00000598201 ERN1O75460 977 aaKnown RBP16.4■□□□□ 0.22
SHKBP1-216ENST00000598201 C1QCP02747 245 aa16.4■□□□□ 0.22
SHKBP1-216ENST00000598201 DRD1P21728 446 aa16.4■□□□□ 0.22
SHKBP1-216ENST00000598201 KIR3DL1P43629 444 aa16.4■□□□□ 0.22
SHKBP1-216ENST00000598201 WNT3P56703 355 aa16.4■□□□□ 0.22
SHKBP1-216ENST00000598201 FOLH1Q04609 750 aa16.4■□□□□ 0.22
SHKBP1-216ENST00000598201 DMPKQ09013 629 aa16.4■□□□□ 0.22
SHKBP1-216ENST00000598201 AASDHQ4L235 1098 aaPredicted RBP16.4■□□□□ 0.22
SHKBP1-216ENST00000598201 TMEM92Q6UXU6 159 aa16.4■□□□□ 0.22
SHKBP1-216ENST00000598201 PROSER1Q86XN7 944 aa16.4■□□□□ 0.22
SHKBP1-216ENST00000598201 EME1Q96AY2 570 aa16.4■□□□□ 0.22
SHKBP1-216ENST00000598201 MIEF2Q96C03 454 aa16.4■□□□□ 0.22
SHKBP1-216ENST00000598201 REPS1Q96D71 796 aa16.4■□□□□ 0.22
SHKBP1-216ENST00000598201 MSANTD3Q96H12 275 aa16.4■□□□□ 0.22
SHKBP1-216ENST00000598201 METTL2AQ96IZ6 378 aaKnown RBP16.4■□□□□ 0.22
SHKBP1-216ENST00000598201 BTBD9Q96Q07 612 aa16.4■□□□□ 0.22
SHKBP1-216ENST00000598201 CPPED1Q9BRF8 314 aaPredicted RBP16.4■□□□□ 0.22
SHKBP1-216ENST00000598201 BTBD1Q9H0C5 482 aa16.4■□□□□ 0.22
SHKBP1-216ENST00000598201 RMND5AQ9H871 391 aa16.4■□□□□ 0.22
SHKBP1-216ENST00000598201 COQ10BQ9H8M1 238 aa16.4■□□□□ 0.22
SHKBP1-216ENST00000598201 PREBQ9HCU5 417 aa16.4■□□□□ 0.22
SHKBP1-216ENST00000598201 ERVK-11Q9UQG0 969 aa16.4■□□□□ 0.22
SHKBP1-216ENST00000598201 KRBA1A5PL33 1030 aa16.39■□□□□ 0.21
SHKBP1-216ENST00000598201 FAM149AA5PLN7 773 aa16.39■□□□□ 0.21
SHKBP1-216ENST00000598201 SHISA7A6NL88 538 aa16.39■□□□□ 0.21
SHKBP1-216ENST00000598201 FOXE1O00358 373 aaPredicted RBP16.39■□□□□ 0.21
SHKBP1-216ENST00000598201 SAP18O00422 153 aaKnown RBP16.39■□□□□ 0.21
SHKBP1-216ENST00000598201 YY2O15391 372 aa16.39■□□□□ 0.21
SHKBP1-216ENST00000598201 SCN2BO60939 215 aa16.39■□□□□ 0.21
SHKBP1-216ENST00000598201 TGFB1P01137 390 aa16.39■□□□□ 0.21
SHKBP1-216ENST00000598201 GPIP06744 558 aa16.39■□□□□ 0.21
SHKBP1-216ENST00000598201 ANXA4P09525 319 aaPredicted RBP16.39■□□□□ 0.21
SHKBP1-216ENST00000598201 UBTFL6P0CB48 400 aaPredicted RBP16.39■□□□□ 0.21
SHKBP1-216ENST00000598201 GGT1P19440 569 aa16.39■□□□□ 0.21
SHKBP1-216ENST00000598201 PRKCQQ04759 706 aa16.39■□□□□ 0.21
SHKBP1-216ENST00000598201 PYCR3Q53H96 274 aa16.39■□□□□ 0.21
SHKBP1-216ENST00000598201 PAGE2BQ5JRK9 111 aa16.39■□□□□ 0.21
SHKBP1-216ENST00000598201 ARMCX6Q7L4S7 300 aa16.39■□□□□ 0.21
SHKBP1-216ENST00000598201 SIX5Q8N196 739 aa16.39■□□□□ 0.21
SHKBP1-216ENST00000598201 ZNF548Q8NEK5 533 aaPredicted RBP16.39■□□□□ 0.21
SHKBP1-216ENST00000598201 OR2T12Q8NG77 320 aa16.39■□□□□ 0.21
SHKBP1-216ENST00000598201 RPLP0P6Q8NHW5 317 aa16.39■□□□□ 0.21
SHKBP1-216ENST00000598201 EDAQ92838 391 aa16.39■□□□□ 0.21
SHKBP1-216ENST00000598201 TBCDQ9BTW9 1192 aa16.39■□□□□ 0.21
SHKBP1-216ENST00000598201 OR51B5Q9H339 312 aa16.39■□□□□ 0.21
SHKBP1-216ENST00000598201 TRIT1Q9H3H1 467 aaKnown RBP16.39■□□□□ 0.21
SHKBP1-216ENST00000598201 TAC3Q9UHF0 121 aa16.39■□□□□ 0.21
SHKBP1-216ENST00000598201 MAGEL2Q9UJ55 1249 aa16.39■□□□□ 0.21
SHKBP1-216ENST00000598201 MOSPD1Q9UJG1 213 aa16.39■□□□□ 0.21
SHKBP1-216ENST00000598201 ACSL5Q9ULC5 683 aa16.39■□□□□ 0.21
SHKBP1-216ENST00000598201 SUFUQ9UMX1 484 aa16.39■□□□□ 0.21
SHKBP1-216ENST00000598201 V9GYQ6 96 aa16.39■□□□□ 0.21
SHKBP1-216ENST00000598201 POM121BA6NF01 834 aa16.39■□□□□ 0.21
SHKBP1-216ENST00000598201 PRMT3O60678 531 aa16.39■□□□□ 0.21
SHKBP1-216ENST00000598201 MYO1DO94832 1006 aa16.39■□□□□ 0.21
SHKBP1-216ENST00000598201 RPN2P04844 631 aa16.39■□□□□ 0.21
SHKBP1-216ENST00000598201 COX7A2P14406 83 aa16.39■□□□□ 0.21
SHKBP1-216ENST00000598201 PCSK2P16519 638 aa16.39■□□□□ 0.21
SHKBP1-216ENST00000598201 CD72P21854 359 aa16.39■□□□□ 0.21
SHKBP1-216ENST00000598201 IL10P22301 178 aa16.39■□□□□ 0.21
SHKBP1-216ENST00000598201 PSMB5P28074 263 aa16.39■□□□□ 0.21
SHKBP1-216ENST00000598201 CYP2A13Q16696 494 aa16.39■□□□□ 0.21
SHKBP1-216ENST00000598201 HKDC1Q2TB90 917 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms