RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 FAM45BPQ6NSW5 357 aa14.33□□□□□ -0.12
LIG1-215ENST00000597901 FBXO36Q8NEA4 188 aa14.33□□□□□ -0.12
LIG1-215ENST00000597901 FAM45AQ8TCE6 357 aa14.33□□□□□ -0.12
LIG1-215ENST00000597901 OLFM1Q99784 485 aa14.33□□□□□ -0.12
LIG1-215ENST00000597901 MESP1Q9BRJ9 268 aa14.33□□□□□ -0.12
LIG1-215ENST00000597901 SGPP1Q9BX95 441 aa14.33□□□□□ -0.12
LIG1-215ENST00000597901 TRIM54Q9BYV2 358 aa14.33□□□□□ -0.12
LIG1-215ENST00000597901 VPS4AQ9UN37 437 aa14.33□□□□□ -0.12
LIG1-215ENST00000597901 MYO18BQ8IUG5 2567 aa14.32□□□□□ -0.12
LIG1-215ENST00000597901 SNRNP200O75643 2136 aaKnown RBP14.32□□□□□ -0.12
LIG1-215ENST00000597901 FFAR3O14843 346 aa14.32□□□□□ -0.12
LIG1-215ENST00000597901 GPR42O15529 346 aa14.32□□□□□ -0.12
LIG1-215ENST00000597901 PRPF4O43172 522 aaKnown RBP eCLIP14.32□□□□□ -0.122e-8■■■□□ 15.8
LIG1-215ENST00000597901 LCMT2O60294 686 aaKnown RBP14.32□□□□□ -0.12
LIG1-215ENST00000597901 STATHP02808 62 aa14.32□□□□□ -0.12
LIG1-215ENST00000597901 ANXA5P08758 320 aa14.32□□□□□ -0.12
LIG1-215ENST00000597901 RPS15AP62244 130 aaKnown RBP14.32□□□□□ -0.12
LIG1-215ENST00000597901 SRSF1Q07955 248 aaKnown RBP eCLIP14.32□□□□□ -0.12
LIG1-215ENST00000597901 Q0VFX4 171 aa14.32□□□□□ -0.12
LIG1-215ENST00000597901 FASTKD3Q14CZ7 662 aaKnown RBP14.32□□□□□ -0.12
LIG1-215ENST00000597901 NDUFA9Q16795 377 aa14.32□□□□□ -0.12
LIG1-215ENST00000597901 TUBB8Q3ZCM7 444 aa14.32□□□□□ -0.12
LIG1-215ENST00000597901 DUPD1Q68J44 220 aa14.32□□□□□ -0.12
LIG1-215ENST00000597901 LCTLQ6UWM7 567 aa14.32□□□□□ -0.12
LIG1-215ENST00000597901 TMEM207Q6UWW9 146 aa14.32□□□□□ -0.12
LIG1-215ENST00000597901 VN1R4Q7Z5H5 301 aa14.32□□□□□ -0.12
LIG1-215ENST00000597901 STRA8Q7Z7C7 330 aa14.32□□□□□ -0.12
LIG1-215ENST00000597901 C17orf64Q86WR6 236 aa14.32□□□□□ -0.12
LIG1-215ENST00000597901 ZADH2Q8N4Q0 377 aa14.32□□□□□ -0.12
LIG1-215ENST00000597901 FAM26EQ8N5C1 309 aa14.32□□□□□ -0.12
LIG1-215ENST00000597901 AMER3Q8N944 861 aa14.32□□□□□ -0.12
LIG1-215ENST00000597901 GALNT11Q8NCW6 608 aa14.32□□□□□ -0.12
LIG1-215ENST00000597901 BBOF1Q8ND07 529 aa14.32□□□□□ -0.12
LIG1-215ENST00000597901 SPATA4Q8NEY3 305 aa14.32□□□□□ -0.12
LIG1-215ENST00000597901 TM4SF19Q96DZ7 209 aa14.32□□□□□ -0.12
LIG1-215ENST00000597901 THAP11Q96EK4 314 aa14.32□□□□□ -0.12
LIG1-215ENST00000597901 MACROD1Q9BQ69 325 aa14.32□□□□□ -0.12
LIG1-215ENST00000597901 ERP44Q9BS26 406 aa14.32□□□□□ -0.12
LIG1-215ENST00000597901 TGIF2Q9GZN2 237 aa14.32□□□□□ -0.12
LIG1-215ENST00000597901 DRC3Q9H069 523 aa14.32□□□□□ -0.12
LIG1-215ENST00000597901 ARL15Q9NXU5 204 aa14.32□□□□□ -0.12
LIG1-215ENST00000597901 ZFATQ9P243 1243 aa14.32□□□□□ -0.12
LIG1-215ENST00000597901 SH2B3Q9UQQ2 575 aa14.32□□□□□ -0.12
LIG1-215ENST00000597901 B3GNT3Q9Y2A9 372 aa14.32□□□□□ -0.12
LIG1-215ENST00000597901 MRPS2Q9Y399 296 aaKnown RBP14.32□□□□□ -0.12
LIG1-215ENST00000597901 PSAT1Q9Y617 370 aa14.32□□□□□ -0.12
LIG1-215ENST00000597901 SETXQ7Z333 2677 aaKnown RBP14.31□□□□□ -0.12
LIG1-215ENST00000597901 FEZF1A0PJY2 475 aa14.31□□□□□ -0.12
LIG1-215ENST00000597901 CLEC18AA5D8T8 446 aa14.31□□□□□ -0.12
LIG1-215ENST00000597901 FAM187AA6NFU0 413 aa14.31□□□□□ -0.12
LIG1-215ENST00000597901 NDC80O14777 642 aa14.31□□□□□ -0.12
LIG1-215ENST00000597901 SAT1P21673 171 aa14.31□□□□□ -0.12
LIG1-215ENST00000597901 CCND1P24385 295 aa14.31□□□□□ -0.12
LIG1-215ENST00000597901 AVPR1BP47901 424 aa14.31□□□□□ -0.12
LIG1-215ENST00000597901 AP1S2P56377 157 aa14.31□□□□□ -0.12
LIG1-215ENST00000597901 SNRPNP63162 240 aaKnown RBP14.31□□□□□ -0.12
LIG1-215ENST00000597901 SYT16Q17RD7 645 aa14.31□□□□□ -0.12
LIG1-215ENST00000597901 PRR30Q53SZ7 412 aaPredicted RBP14.31□□□□□ -0.12
LIG1-215ENST00000597901 AGAP7PQ5VUJ5 663 aa14.31□□□□□ -0.12
LIG1-215ENST00000597901 CAPN13Q6MZZ7 669 aaPredicted RBP14.31□□□□□ -0.12
LIG1-215ENST00000597901 CLEC18BQ6UXF7 455 aa14.31□□□□□ -0.12
LIG1-215ENST00000597901 MAATS1Q7Z4T9 603 aa14.31□□□□□ -0.12
LIG1-215ENST00000597901 ZC3HC1Q86WB0 502 aaKnown RBP14.31□□□□□ -0.12
LIG1-215ENST00000597901 CLEC18CQ8NCF0 446 aa14.31□□□□□ -0.12
LIG1-215ENST00000597901 OR56A3Q8NH54 315 aa14.31□□□□□ -0.12
LIG1-215ENST00000597901 TM9SF4Q92544 642 aa14.31□□□□□ -0.12
LIG1-215ENST00000597901 PYCR2Q96C36 320 aa14.31□□□□□ -0.12
LIG1-215ENST00000597901 C8orf44Q96CB5 159 aa14.31□□□□□ -0.12
LIG1-215ENST00000597901 THOC3Q96J01 351 aaKnown RBP14.31□□□□□ -0.12
LIG1-215ENST00000597901 AGAP4Q96P64 663 aa14.31□□□□□ -0.12
LIG1-215ENST00000597901 HAUS8Q9BT25 410 aa14.31□□□□□ -0.12
LIG1-215ENST00000597901 LHPPQ9H008 270 aa14.31□□□□□ -0.12
LIG1-215ENST00000597901 MKKSQ9NPJ1 570 aaPredicted RBP14.31□□□□□ -0.12
LIG1-215ENST00000597901 IKZF3Q9UKT9 509 aa14.31□□□□□ -0.12
LIG1-215ENST00000597901 FER1L5A0AVI2 2057 aa14.3□□□□□ -0.12
LIG1-215ENST00000597901 IDSB3KWA1 339 aa14.3□□□□□ -0.12
LIG1-215ENST00000597901 GUCA1CO95843 209 aa14.3□□□□□ -0.12
LIG1-215ENST00000597901 HPP00738 406 aa14.3□□□□□ -0.12
LIG1-215ENST00000597901 HEXBP07686 556 aa14.3□□□□□ -0.12
LIG1-215ENST00000597901 CDH1P12830 882 aa14.3□□□□□ -0.12
LIG1-215ENST00000597901 ACPPP15309 386 aa14.3□□□□□ -0.12
LIG1-215ENST00000597901 GNLYP22749 145 aa14.3□□□□□ -0.12
LIG1-215ENST00000597901 CXCR2P25025 360 aa14.3□□□□□ -0.12
LIG1-215ENST00000597901 VARSP26640 1264 aaKnown RBP14.3□□□□□ -0.12
LIG1-215ENST00000597901 CASQ1P31415 396 aa14.3□□□□□ -0.12
LIG1-215ENST00000597901 TAS2R39P59534 338 aa14.3□□□□□ -0.12
LIG1-215ENST00000597901 MAT1AQ00266 395 aaKnown RBP14.3□□□□□ -0.12
LIG1-215ENST00000597901 IRAK1BP1Q5VVH5 260 aa14.3□□□□□ -0.12
LIG1-215ENST00000597901 IGFL2Q6UWQ7 119 aa14.3□□□□□ -0.12
LIG1-215ENST00000597901 Q6ZS92 163 aa14.3□□□□□ -0.12
LIG1-215ENST00000597901 NDUFAF7Q7L592 441 aa14.3□□□□□ -0.12
LIG1-215ENST00000597901 SLC26A11Q86WA9 606 aa14.3□□□□□ -0.12
LIG1-215ENST00000597901 ZBED8Q8IZ13 594 aa14.3□□□□□ -0.12
LIG1-215ENST00000597901 CISD2Q8N5K1 135 aaKnown RBP14.3□□□□□ -0.12
LIG1-215ENST00000597901 CAMKVQ8NCB2 501 aa14.3□□□□□ -0.12
LIG1-215ENST00000597901 OR4K1Q8NGD4 311 aa14.3□□□□□ -0.12
LIG1-215ENST00000597901 OR9A4Q8NGU2 314 aa14.3□□□□□ -0.12
LIG1-215ENST00000597901 PYROXD1Q8WU10 500 aa14.3□□□□□ -0.12
LIG1-215ENST00000597901 ATL1Q8WXF7 558 aa14.3□□□□□ -0.12
LIG1-215ENST00000597901 FBXL8Q96CD0 374 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms