RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 UNC50Q53HI1 259 aa21.18■□□□□ 0.98
CHMP2A-204ENST00000597848 TTMPQ5BVD1 217 aa21.18■□□□□ 0.98
CHMP2A-204ENST00000597848 FRMPD2BQ6IN97 320 aa21.18■□□□□ 0.98
CHMP2A-204ENST00000597848 MYLK4Q86YV6 388 aaPredicted RBP21.18■□□□□ 0.98
CHMP2A-204ENST00000597848 GPR135Q8IZ08 494 aa21.18■□□□□ 0.98
CHMP2A-204ENST00000597848 OR4N4Q8N0Y3 316 aa21.18■□□□□ 0.98
CHMP2A-204ENST00000597848 LSMEM2Q8N112 164 aa21.18■□□□□ 0.98
CHMP2A-204ENST00000597848 KRT78Q8N1N4 520 aa21.18■□□□□ 0.98
CHMP2A-204ENST00000597848 OR8K5Q8NH50 307 aa21.18■□□□□ 0.98
CHMP2A-204ENST00000597848 ZNF483Q8TF39 744 aaPredicted RBP21.18■□□□□ 0.98
CHMP2A-204ENST00000597848 RERGQ96A58 199 aaPredicted RBP21.18■□□□□ 0.98
CHMP2A-204ENST00000597848 L3HYPDHQ96EM0 354 aa21.18■□□□□ 0.98
CHMP2A-204ENST00000597848 MOCOSQ96EN8 888 aa21.18■□□□□ 0.98
CHMP2A-204ENST00000597848 PTCD3Q96EY7 689 aaKnown RBP21.18■□□□□ 0.98
CHMP2A-204ENST00000597848 SLC46A1Q96NT5 459 aa21.18■□□□□ 0.98
CHMP2A-204ENST00000597848 C1QTNF3Q9BXJ4 246 aa21.18■□□□□ 0.98
CHMP2A-204ENST00000597848 ASPSCR1Q9BZE9 553 aa21.18■□□□□ 0.98
CHMP2A-204ENST00000597848 SPRTNQ9H040 489 aaPredicted RBP21.18■□□□□ 0.98
CHMP2A-204ENST00000597848 ACTR8Q9H981 624 aa21.18■□□□□ 0.98
CHMP2A-204ENST00000597848 TRBC2A0A5B9 178 aa21.17■□□□□ 0.98
CHMP2A-204ENST00000597848 TMEM120BA0PK00 339 aa21.17■□□□□ 0.98
CHMP2A-204ENST00000597848 H0YGG7 62 aa21.17■□□□□ 0.98
CHMP2A-204ENST00000597848 SRPX2O60687 465 aaPredicted RBP21.17■□□□□ 0.98
CHMP2A-204ENST00000597848 TRIM13O60858 407 aa21.17■□□□□ 0.98
CHMP2A-204ENST00000597848 FGF5P12034 268 aa21.17■□□□□ 0.98
CHMP2A-204ENST00000597848 TSPAN8P19075 237 aa21.17■□□□□ 0.98
CHMP2A-204ENST00000597848 ALDH3A1P30838 453 aa21.17■□□□□ 0.98
CHMP2A-204ENST00000597848 NAGLUP54802 743 aa21.17■□□□□ 0.98
CHMP2A-204ENST00000597848 ITGA1P56199 1179 aa21.17■□□□□ 0.98
CHMP2A-204ENST00000597848 DNAJB13P59910 316 aa21.17■□□□□ 0.98
CHMP2A-204ENST00000597848 ARF3P61204 181 aaPredicted RBP21.17■□□□□ 0.98
CHMP2A-204ENST00000597848 SHC2P98077 582 aa21.17■□□□□ 0.98
CHMP2A-204ENST00000597848 ASPHQ12797 758 aa21.17■□□□□ 0.98
CHMP2A-204ENST00000597848 MPP2Q14168 576 aa21.17■□□□□ 0.98
CHMP2A-204ENST00000597848 SLBPQ14493 270 aaKnown RBP eCLIP21.17■□□□□ 0.98
CHMP2A-204ENST00000597848 HIST2H2ACQ16777 129 aaPredicted RBP21.17■□□□□ 0.98
CHMP2A-204ENST00000597848 CFAP157Q5JU67 520 aa21.17■□□□□ 0.98
CHMP2A-204ENST00000597848 LIPMQ5VYY2 423 aa21.17■□□□□ 0.98
CHMP2A-204ENST00000597848 HIST2H2AA3Q6FI13 130 aa21.17■□□□□ 0.98
CHMP2A-204ENST00000597848 ZNF740Q8NDX6 193 aa21.17■□□□□ 0.98
CHMP2A-204ENST00000597848 SREK1Q8WXA9 508 aaKnown RBP21.17■□□□□ 0.98
CHMP2A-204ENST00000597848 PMEPA1Q969W9 287 aa21.17■□□□□ 0.98
CHMP2A-204ENST00000597848 DDA1Q9BW61 102 aa21.17■□□□□ 0.98
CHMP2A-204ENST00000597848 SPNS1Q9H2V7 528 aa21.17■□□□□ 0.98
CHMP2A-204ENST00000597848 EHD1Q9H4M9 534 aa21.17■□□□□ 0.98
CHMP2A-204ENST00000597848 PRM3Q9NNZ6 103 aa21.17■□□□□ 0.98
CHMP2A-204ENST00000597848 GEMIN8Q9NWZ8 242 aaKnown RBP21.17■□□□□ 0.98
CHMP2A-204ENST00000597848 B3GALT1Q9Y5Z6 326 aa21.17■□□□□ 0.98
CHMP2A-204ENST00000597848 HMGB1P1B2RPK0 211 aaPredicted RBP21.16■□□□□ 0.98
CHMP2A-204ENST00000597848 LCMT2O60294 686 aaKnown RBP21.16■□□□□ 0.98
CHMP2A-204ENST00000597848 PRAMEF4O60810 478 aa21.16■□□□□ 0.98
CHMP2A-204ENST00000597848 BCL6P41182 706 aa21.16■□□□□ 0.98
CHMP2A-204ENST00000597848 ETV4P43268 484 aa21.16■□□□□ 0.98
CHMP2A-204ENST00000597848 CCNG1P51959 295 aa21.16■□□□□ 0.98
CHMP2A-204ENST00000597848 REEP5Q00765 189 aa21.16■□□□□ 0.98
CHMP2A-204ENST00000597848 CLCQ05315 142 aa21.16■□□□□ 0.98
CHMP2A-204ENST00000597848 LAPTM5Q13571 262 aa21.16■□□□□ 0.98
CHMP2A-204ENST00000597848 TBCCQ15814 346 aa21.16■□□□□ 0.98
CHMP2A-204ENST00000597848 PAGE2BQ5JRK9 111 aa21.16■□□□□ 0.98
CHMP2A-204ENST00000597848 WASHC2DQ5SRD0 308 aa21.16■□□□□ 0.98
CHMP2A-204ENST00000597848 PRAMEF9Q5VWM5 478 aa21.16■□□□□ 0.98
CHMP2A-204ENST00000597848 TMEM126BQ8IUX1 230 aa21.16■□□□□ 0.98
CHMP2A-204ENST00000597848 MFSD9Q8NBP5 474 aa21.16■□□□□ 0.98
CHMP2A-204ENST00000597848 TRPC4APQ8TEL6 797 aa21.16■□□□□ 0.98
CHMP2A-204ENST00000597848 THAP11Q96EK4 314 aa21.16■□□□□ 0.98
CHMP2A-204ENST00000597848 RNF31Q96EP0 1072 aa21.16■□□□□ 0.98
CHMP2A-204ENST00000597848 TEFMQ96QE5 360 aaKnown RBP21.16■□□□□ 0.98
CHMP2A-204ENST00000597848 OR2A5Q96R48 311 aa21.16■□□□□ 0.98
CHMP2A-204ENST00000597848 PAIP2Q9BPZ3 127 aaKnown RBP21.16■□□□□ 0.98
CHMP2A-204ENST00000597848 ZPBPQ9BS86 351 aa21.16■□□□□ 0.98
CHMP2A-204ENST00000597848 EFCAB11Q9BUY7 163 aa21.16■□□□□ 0.98
CHMP2A-204ENST00000597848 MECRQ9BV79 373 aa21.16■□□□□ 0.98
CHMP2A-204ENST00000597848 STARD5Q9NSY2 213 aa21.16■□□□□ 0.98
CHMP2A-204ENST00000597848 NKIRAS1Q9NYS0 192 aa21.16■□□□□ 0.98
CHMP2A-204ENST00000597848 WDR91A4D1P6 747 aa21.15■□□□□ 0.98
CHMP2A-204ENST00000597848 C9orf172C9J069 976 aa21.15■□□□□ 0.98
CHMP2A-204ENST00000597848 DYNC1I1O14576 645 aa21.15■□□□□ 0.98
CHMP2A-204ENST00000597848 OR7A17O14581 309 aa21.15■□□□□ 0.98
CHMP2A-204ENST00000597848 BRINP1O60477 761 aa21.15■□□□□ 0.98
CHMP2A-204ENST00000597848 BPGMP07738 259 aa21.15■□□□□ 0.98
CHMP2A-204ENST00000597848 CTSBP07858 339 aa21.15■□□□□ 0.98
CHMP2A-204ENST00000597848 HPDP32754 393 aaPredicted RBP21.15■□□□□ 0.98
CHMP2A-204ENST00000597848 CASP2P42575 452 aa21.15■□□□□ 0.98
CHMP2A-204ENST00000597848 SERPINB4P48594 390 aa21.15■□□□□ 0.98
CHMP2A-204ENST00000597848 LARP7Q4G0J3 582 aaKnown RBP eCLIP21.15■□□□□ 0.98
CHMP2A-204ENST00000597848 TCTE1Q5JU00 501 aa21.15■□□□□ 0.98
CHMP2A-204ENST00000597848 HHATQ5VTY9 493 aa21.15■□□□□ 0.98
CHMP2A-204ENST00000597848 PWWP2BQ6NUJ5 590 aa21.15■□□□□ 0.98
CHMP2A-204ENST00000597848 TMIGD1Q6UXZ0 262 aa21.15■□□□□ 0.98
CHMP2A-204ENST00000597848 NUDCD3Q8IVD9 361 aa21.15■□□□□ 0.98
CHMP2A-204ENST00000597848 MGARPQ8TDB4 240 aa21.15■□□□□ 0.98
CHMP2A-204ENST00000597848 WDR34Q96EX3 536 aa21.15■□□□□ 0.98
CHMP2A-204ENST00000597848 SLC7A5P2Q9GIP4 190 aa21.15■□□□□ 0.98
CHMP2A-204ENST00000597848 ZBTB26Q9HCK0 441 aa21.15■□□□□ 0.98
CHMP2A-204ENST00000597848 MLXIPLQ9NP71 852 aa21.15■□□□□ 0.98
CHMP2A-204ENST00000597848 PCDHGA3Q9Y5H0 932 aa21.15■□□□□ 0.98
CHMP2A-204ENST00000597848 KCNE1BA0A087WTH5 132 aa21.14■□□□□ 0.97
CHMP2A-204ENST00000597848 NVLO15381 856 aaKnown RBP21.14■□□□□ 0.97
CHMP2A-204ENST00000597848 ATP8B1O43520 1251 aa21.14■□□□□ 0.97
CHMP2A-204ENST00000597848 SCRG1O75711 98 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms