RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 NUDT7P0C024 238 aa21.9■■□□□ 1.1
SRRM1-222ENST00000596378 MYOGP15173 224 aa21.9■■□□□ 1.1
SRRM1-222ENST00000596378 HOXA9P31269 272 aa21.9■■□□□ 1.1
SRRM1-222ENST00000596378 MAPK10P53779 464 aa21.9■■□□□ 1.1
SRRM1-222ENST00000596378 GTF2H3Q13889 308 aa21.9■■□□□ 1.1
SRRM1-222ENST00000596378 STARD3Q14849 445 aa21.9■■□□□ 1.1
SRRM1-222ENST00000596378 TTC23Q5W5X9 447 aa21.9■■□□□ 1.1
SRRM1-222ENST00000596378 YTHDF1Q9BYJ9 559 aaKnown RBP21.9■■□□□ 1.1
SRRM1-222ENST00000596378 FAM120CQ9NX05 1096 aaKnown RBP21.9■■□□□ 1.1
SRRM1-222ENST00000596378 ATE1O95260 518 aa21.9■■□□□ 1.1
SRRM1-222ENST00000596378 HNRNPA1P09651 372 aaKnown RBP eCLIP21.9■■□□□ 1.1
SRRM1-222ENST00000596378 PIGFQ07326 219 aa21.9■■□□□ 1.1
SRRM1-222ENST00000596378 C11orf91Q3C1V1 193 aa21.9■■□□□ 1.1
SRRM1-222ENST00000596378 FNDC3BQ53EP0 1204 aaKnown RBP21.9■■□□□ 1.1
SRRM1-222ENST00000596378 TMEM240Q5SV17 173 aa21.9■■□□□ 1.1
SRRM1-222ENST00000596378 RAET1GQ6H3X3 334 aa21.9■■□□□ 1.1
SRRM1-222ENST00000596378 ZNF773Q6PK81 442 aa21.9■■□□□ 1.1
SRRM1-222ENST00000596378 XKR5Q6UX68 686 aa21.9■■□□□ 1.1
SRRM1-222ENST00000596378 SLCO4C1Q6ZQN7 724 aa21.9■■□□□ 1.1
SRRM1-222ENST00000596378 CEP68Q76N32 757 aa21.9■■□□□ 1.1
SRRM1-222ENST00000596378 GALNT5Q7Z7M9 940 aa21.9■■□□□ 1.1
SRRM1-222ENST00000596378 NLRP8Q86W28 1048 aa21.9■■□□□ 1.1
SRRM1-222ENST00000596378 CELF5Q8N6W0 485 aaKnown RBP21.9■■□□□ 1.1
SRRM1-222ENST00000596378 RDH12Q96NR8 316 aa21.9■■□□□ 1.1
SRRM1-222ENST00000596378 FANCEQ9HB96 536 aa21.9■■□□□ 1.1
SRRM1-222ENST00000596378 VPS4AQ9UN37 437 aa21.9■■□□□ 1.1
SRRM1-222ENST00000596378 SAMD4AQ9UPU9 718 aaKnown RBP21.9■■□□□ 1.1
SRRM1-222ENST00000596378 RANBP2P49792 3224 aaKnown RBP21.9■■□□□ 1.1
SRRM1-222ENST00000596378 PRMT3O60678 531 aa21.89■■□□□ 1.1
SRRM1-222ENST00000596378 MMP20O60882 483 aa21.89■■□□□ 1.1
SRRM1-222ENST00000596378 LILRB5O75023 590 aa21.89■■□□□ 1.1
SRRM1-222ENST00000596378 MYO1DO94832 1006 aa21.89■■□□□ 1.1
SRRM1-222ENST00000596378 GPX2P18283 190 aa21.89■■□□□ 1.1
SRRM1-222ENST00000596378 AGXTP21549 392 aa21.89■■□□□ 1.1
SRRM1-222ENST00000596378 CRHBPP24387 322 aa21.89■■□□□ 1.1
SRRM1-222ENST00000596378 MAGEA2P43356 314 aa21.89■■□□□ 1.1
SRRM1-222ENST00000596378 MEF2AQ02078 507 aaPredicted RBP21.89■■□□□ 1.1
SRRM1-222ENST00000596378 CPZQ66K79 652 aa21.89■■□□□ 1.1
SRRM1-222ENST00000596378 CRTC3Q6UUV7 619 aa21.89■■□□□ 1.1
SRRM1-222ENST00000596378 NRSN1Q8IZ57 195 aa21.89■■□□□ 1.1
SRRM1-222ENST00000596378 CHDHQ8NE62 594 aaPredicted RBP21.89■■□□□ 1.1
SRRM1-222ENST00000596378 GNG14A0A1W2PPG7 69 aa21.89■■□□□ 1.09
SRRM1-222ENST00000596378 LINC01553A4QN01 128 aa21.89■■□□□ 1.09
SRRM1-222ENST00000596378 SAP18O00422 153 aaKnown RBP21.89■■□□□ 1.09
SRRM1-222ENST00000596378 IL1RNP18510 177 aa21.89■■□□□ 1.09
SRRM1-222ENST00000596378 CD47Q08722 323 aa21.89■■□□□ 1.09
SRRM1-222ENST00000596378 MYBPC3Q14896 1274 aa21.89■■□□□ 1.09
SRRM1-222ENST00000596378 GPR155Q7Z3F1 870 aa21.89■■□□□ 1.09
SRRM1-222ENST00000596378 DCP2Q8IU60 420 aaKnown RBP21.89■■□□□ 1.09
SRRM1-222ENST00000596378 ARL10Q8N8L6 244 aa21.89■■□□□ 1.09
SRRM1-222ENST00000596378 NUS1Q96E22 293 aa21.89■■□□□ 1.09
SRRM1-222ENST00000596378 TPT1P8Q9HAU6 139 aa21.89■■□□□ 1.09
SRRM1-222ENST00000596378 BRF2Q9HAW0 419 aa21.89■■□□□ 1.09
SRRM1-222ENST00000596378 KCNE2Q9Y6J6 123 aa21.89■■□□□ 1.09
SRRM1-222ENST00000596378 LOC100130705A0A1B0GUX0 176 aa21.88■■□□□ 1.09
SRRM1-222ENST00000596378 MYO1GB0I1T2 1018 aa21.88■■□□□ 1.09
SRRM1-222ENST00000596378 H3BMQ9 156 aa21.88■■□□□ 1.09
SRRM1-222ENST00000596378 C6P13671 934 aa21.88■■□□□ 1.09
SRRM1-222ENST00000596378 GPR1P46091 355 aa21.88■■□□□ 1.09
SRRM1-222ENST00000596378 CASP9P55211 416 aa21.88■■□□□ 1.09
SRRM1-222ENST00000596378 ZNF33BQ06732 778 aa21.88■■□□□ 1.09
SRRM1-222ENST00000596378 GAB1Q13480 694 aa21.88■■□□□ 1.09
SRRM1-222ENST00000596378 C9orf64Q5T6V5 341 aa21.88■■□□□ 1.09
SRRM1-222ENST00000596378 CPTPQ5TA50 214 aa21.88■■□□□ 1.09
SRRM1-222ENST00000596378 LAIR2Q6ISS4 152 aa21.88■■□□□ 1.09
SRRM1-222ENST00000596378 KLHDC8AQ8IYD2 350 aa21.88■■□□□ 1.09
SRRM1-222ENST00000596378 HCAR2Q8TDS4 363 aa21.88■■□□□ 1.09
SRRM1-222ENST00000596378 CHTF18Q8WVB6 975 aa21.88■■□□□ 1.09
SRRM1-222ENST00000596378 COG8Q96MW5 612 aa21.88■■□□□ 1.09
SRRM1-222ENST00000596378 PRKAB1Q9Y478 270 aa21.88■■□□□ 1.09
SRRM1-222ENST00000596378 PCYT1BQ9Y5K3 369 aaPredicted RBP21.88■■□□□ 1.09
SRRM1-222ENST00000596378 ADH1CP00326 375 aa21.88■■□□□ 1.09
SRRM1-222ENST00000596378 PRNPP04156 253 aa21.88■■□□□ 1.09
SRRM1-222ENST00000596378 NTRK1P04629 796 aa21.88■■□□□ 1.09
SRRM1-222ENST00000596378 ABCB1P08183 1280 aaPredicted RBP21.88■■□□□ 1.09
SRRM1-222ENST00000596378 KDELR2P33947 212 aa21.88■■□□□ 1.09
SRRM1-222ENST00000596378 VLDLRP98155 873 aa21.88■■□□□ 1.09
SRRM1-222ENST00000596378 FPGSQ05932 587 aa21.88■■□□□ 1.09
SRRM1-222ENST00000596378 TRMT11Q7Z4G4 463 aaKnown RBP21.88■■□□□ 1.09
SRRM1-222ENST00000596378 ZNF547Q8IVP9 402 aa21.88■■□□□ 1.09
SRRM1-222ENST00000596378 MAL2Q969L2 176 aa21.88■■□□□ 1.09
SRRM1-222ENST00000596378 SPNS1Q9H2V7 528 aa21.88■■□□□ 1.09
SRRM1-222ENST00000596378 TIMMDC1Q9NPL8 285 aa21.88■■□□□ 1.09
SRRM1-222ENST00000596378 ATXN10Q9UBB4 475 aa21.88■■□□□ 1.09
SRRM1-222ENST00000596378 C3orf18Q9UK00 162 aa21.88■■□□□ 1.09
SRRM1-222ENST00000596378 HOXC11O43248 304 aaPredicted RBP21.87■■□□□ 1.09
SRRM1-222ENST00000596378 NPPBP16860 134 aa21.87■■□□□ 1.09
SRRM1-222ENST00000596378 HNRNPFP52597 415 aaKnown RBP21.87■■□□□ 1.09
SRRM1-222ENST00000596378 IL1RL1Q01638 556 aa21.87■■□□□ 1.09
SRRM1-222ENST00000596378 PPIGQ13427 754 aaKnown RBP eCLIP21.87■■□□□ 1.095e-9■■□□□ 12.2
SRRM1-222ENST00000596378 SLBPQ14493 270 aaKnown RBP eCLIP21.87■■□□□ 1.09
SRRM1-222ENST00000596378 MED27Q6P2C8 311 aa21.87■■□□□ 1.09
SRRM1-222ENST00000596378 TMC5Q6UXY8 1006 aa21.87■■□□□ 1.09
SRRM1-222ENST00000596378 CYP4Z1Q86W10 505 aa21.87■■□□□ 1.09
SRRM1-222ENST00000596378 ETFBKMTQ8IXQ9 262 aa21.87■■□□□ 1.09
SRRM1-222ENST00000596378 WFIKKN2Q8TEU8 576 aa21.87■■□□□ 1.09
SRRM1-222ENST00000596378 GAB3Q8WWW8 586 aa21.87■■□□□ 1.09
SRRM1-222ENST00000596378 IL1RAPQ9NPH3 570 aa21.87■■□□□ 1.09
SRRM1-222ENST00000596378 SH3BP4Q9P0V3 963 aa21.87■■□□□ 1.09
SRRM1-222ENST00000596378 EXO1Q9UQ84 846 aaKnown RBP21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms