RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 NINJ1Q92982 152 aa13.01□□□□□ -0.33
SHKBP1-208ENST00000595726 SCMH1Q96GD3 660 aa13.01□□□□□ -0.33
SHKBP1-208ENST00000595726 C10orf90Q96M02 699 aa13.01□□□□□ -0.33
SHKBP1-208ENST00000595726 KCNF1Q9H3M0 494 aa13.01□□□□□ -0.33
SHKBP1-208ENST00000595726 KCNJ16Q9NPI9 418 aa13.01□□□□□ -0.33
SHKBP1-208ENST00000595726 ENAMQ9NRM1 1142 aa13.01□□□□□ -0.33
SHKBP1-208ENST00000595726 SMARCAL1Q9NZC9 954 aa13.01□□□□□ -0.33
SHKBP1-208ENST00000595726 TEKT2Q9UIF3 430 aa13.01□□□□□ -0.33
SHKBP1-208ENST00000595726 ZKSCAN5Q9Y2L8 839 aa13.01□□□□□ -0.33
SHKBP1-208ENST00000595726 RTTNQ86VV8 2226 aa13.01□□□□□ -0.33
SHKBP1-208ENST00000595726 SLC5A10A0PJK1 596 aa13□□□□□ -0.33
SHKBP1-208ENST00000595726 H7C0S8 307 aa13□□□□□ -0.33
SHKBP1-208ENST00000595726 LIN7AO14910 233 aaPredicted RBP13□□□□□ -0.33
SHKBP1-208ENST00000595726 CEP104O60308 925 aa13□□□□□ -0.33
SHKBP1-208ENST00000595726 SRPX2O60687 465 aaPredicted RBP13□□□□□ -0.33
SHKBP1-208ENST00000595726 SUN1O94901 812 aa13□□□□□ -0.33
SHKBP1-208ENST00000595726 ICAM2P13598 275 aa13□□□□□ -0.33
SHKBP1-208ENST00000595726 CDH17Q12864 832 aa13□□□□□ -0.33
SHKBP1-208ENST00000595726 DSG2Q14126 1118 aa13□□□□□ -0.33
SHKBP1-208ENST00000595726 GRB7Q14451 532 aa13□□□□□ -0.33
SHKBP1-208ENST00000595726 DBN1Q16643 649 aa13□□□□□ -0.33
SHKBP1-208ENST00000595726 BIVMQ86UB2 503 aa13□□□□□ -0.33
SHKBP1-208ENST00000595726 SHISA5Q8N114 240 aa13□□□□□ -0.33
SHKBP1-208ENST00000595726 RPRMLQ8N4K4 120 aa13□□□□□ -0.33
SHKBP1-208ENST00000595726 CCDC89Q8N998 374 aa13□□□□□ -0.33
SHKBP1-208ENST00000595726 WFDC11Q8NEX6 87 aa13□□□□□ -0.33
SHKBP1-208ENST00000595726 CFAP61Q8NHU2 1237 aa13□□□□□ -0.33
SHKBP1-208ENST00000595726 MAIP1Q8WWC4 291 aa13□□□□□ -0.33
SHKBP1-208ENST00000595726 HDAC10Q969S8 669 aa13□□□□□ -0.33
SHKBP1-208ENST00000595726 NPAS2Q99743 824 aa13□□□□□ -0.33
SHKBP1-208ENST00000595726 POLDIP3Q9BY77 421 aaKnown RBP13□□□□□ -0.33
SHKBP1-208ENST00000595726 RAB6BQ9NRW1 208 aa13□□□□□ -0.33
SHKBP1-208ENST00000595726 INTS7Q9NVH2 962 aaKnown RBP13□□□□□ -0.33
SHKBP1-208ENST00000595726 NLE1Q9NVX2 485 aaPredicted RBP13□□□□□ -0.33
SHKBP1-208ENST00000595726 PAK5Q9P286 719 aa13□□□□□ -0.33
SHKBP1-208ENST00000595726 MKL2Q9ULH7 1088 aa13□□□□□ -0.33
SHKBP1-208ENST00000595726 ZANQ9Y493 2812 aa12.99□□□□□ -0.33
SHKBP1-208ENST00000595726 TRBV5-4A0A0C4DH59 114 aa12.99□□□□□ -0.33
SHKBP1-208ENST00000595726 MROH6A6NGR9 719 aa12.99□□□□□ -0.33
SHKBP1-208ENST00000595726 CTAG2O75638 210 aa12.99□□□□□ -0.33
SHKBP1-208ENST00000595726 TPOP07202 933 aa12.99□□□□□ -0.33
SHKBP1-208ENST00000595726 ZSCAN5DPP0CG00 497 aa12.99□□□□□ -0.33
SHKBP1-208ENST00000595726 PSMB5P28074 263 aa12.99□□□□□ -0.33
SHKBP1-208ENST00000595726 CHRNB4P30926 498 aa12.99□□□□□ -0.33
SHKBP1-208ENST00000595726 GRIA1P42261 906 aa12.99□□□□□ -0.33
SHKBP1-208ENST00000595726 YBX1P67809 324 aaKnown RBP12.99□□□□□ -0.33
SHKBP1-208ENST00000595726 SNTB1Q13884 538 aaKnown RBP12.99□□□□□ -0.33
SHKBP1-208ENST00000595726 BTBD16Q32M84 506 aa12.99□□□□□ -0.33
SHKBP1-208ENST00000595726 GPR33Q49SQ1 333 aa12.99□□□□□ -0.33
SHKBP1-208ENST00000595726 TMEM205Q6UW68 189 aa12.99□□□□□ -0.33
SHKBP1-208ENST00000595726 CD163Q86VB7 1156 aa12.99□□□□□ -0.33
SHKBP1-208ENST00000595726 CRLF3Q8IUI8 442 aa12.99□□□□□ -0.33
SHKBP1-208ENST00000595726 VRK3Q8IV63 474 aa12.99□□□□□ -0.33
SHKBP1-208ENST00000595726 REXO1L1PQ8IX06 675 aa12.99□□□□□ -0.33
SHKBP1-208ENST00000595726 AMER3Q8N944 861 aa12.99□□□□□ -0.33
SHKBP1-208ENST00000595726 STYXQ8WUJ0 223 aa12.99□□□□□ -0.33
SHKBP1-208ENST00000595726 ASB5Q8WWX0 329 aa12.99□□□□□ -0.33
SHKBP1-208ENST00000595726 SLC22A18Q96BI1 424 aa12.99□□□□□ -0.33
SHKBP1-208ENST00000595726 ZNF354BQ96LW1 612 aa12.99□□□□□ -0.33
SHKBP1-208ENST00000595726 PWWP2AQ96N64 755 aa12.99□□□□□ -0.33
SHKBP1-208ENST00000595726 MIPEPQ99797 713 aa12.99□□□□□ -0.33
SHKBP1-208ENST00000595726 UTP23Q9BRU9 249 aaKnown RBP12.99□□□□□ -0.33
SHKBP1-208ENST00000595726 LRFN1Q9P244 771 aa12.99□□□□□ -0.33
SHKBP1-208ENST00000595726 DRG1Q9Y295 367 aaKnown RBP12.99□□□□□ -0.33
SHKBP1-208ENST00000595726 JRKLQ9Y4A0 524 aa12.99□□□□□ -0.33
SHKBP1-208ENST00000595726 MXRA5Q9NR99 2828 aa12.99□□□□□ -0.33
SHKBP1-208ENST00000595726 A0A1B0GTH9 108 aa12.98□□□□□ -0.33
SHKBP1-208ENST00000595726 KRT87PA6NCN2 255 aa12.98□□□□□ -0.33
SHKBP1-208ENST00000595726 OR2W5A6NFC9 320 aa12.98□□□□□ -0.33
SHKBP1-208ENST00000595726 E7EVH7 732 aa12.98□□□□□ -0.33
SHKBP1-208ENST00000595726 RASGRF2O14827 1237 aa12.98□□□□□ -0.33
SHKBP1-208ENST00000595726 S1PR4O95977 384 aa12.98□□□□□ -0.33
SHKBP1-208ENST00000595726 APRTP07741 180 aa12.98□□□□□ -0.33
SHKBP1-208ENST00000595726 SP1P08047 785 aa12.98□□□□□ -0.33
SHKBP1-208ENST00000595726 CD46P15529 392 aa12.98□□□□□ -0.33
SHKBP1-208ENST00000595726 PSMA3P25788 255 aa12.98□□□□□ -0.33
SHKBP1-208ENST00000595726 RPL22P35268 128 aaKnown RBP12.98□□□□□ -0.33
SHKBP1-208ENST00000595726 KCNJ1P48048 391 aa12.98□□□□□ -0.33
SHKBP1-208ENST00000595726 MEOX1P50221 254 aa12.98□□□□□ -0.33
SHKBP1-208ENST00000595726 MAT1AQ00266 395 aaKnown RBP12.98□□□□□ -0.33
SHKBP1-208ENST00000595726 OC90Q02509 493 aaPredicted RBP12.98□□□□□ -0.33
SHKBP1-208ENST00000595726 MAPKAPK3Q16644 382 aa12.98□□□□□ -0.33
SHKBP1-208ENST00000595726 MUM1Q2TAK8 710 aa12.98□□□□□ -0.33
SHKBP1-208ENST00000595726 SYTL3Q4VX76 610 aa12.98□□□□□ -0.33
SHKBP1-208ENST00000595726 CCDC38Q502W7 563 aa12.98□□□□□ -0.33
SHKBP1-208ENST00000595726 H3F3CQ6NXT2 135 aa12.98□□□□□ -0.33
SHKBP1-208ENST00000595726 CLEC9AQ6UXN8 241 aa12.98□□□□□ -0.33
SHKBP1-208ENST00000595726 PPP1R21Q6ZMI0 780 aa12.98□□□□□ -0.33
SHKBP1-208ENST00000595726 LANCL3Q6ZV70 420 aa12.98□□□□□ -0.33
SHKBP1-208ENST00000595726 RASGEF1CQ8N431 466 aa12.98□□□□□ -0.33
SHKBP1-208ENST00000595726 CPSF7Q8N684 471 aaKnown RBP12.98□□□□□ -0.33
SHKBP1-208ENST00000595726 PRELID2Q8N945 189 aa12.98□□□□□ -0.33
SHKBP1-208ENST00000595726 FAM57AQ8TBR7 257 aa12.98□□□□□ -0.33
SHKBP1-208ENST00000595726 ZUFSPQ96AP4 578 aa12.98□□□□□ -0.33
SHKBP1-208ENST00000595726 ARSGQ96EG1 525 aa12.98□□□□□ -0.33
SHKBP1-208ENST00000595726 MMABQ96EY8 250 aaPredicted RBP12.98□□□□□ -0.33
SHKBP1-208ENST00000595726 CDKN2AIPNLQ96HQ2 116 aa12.98□□□□□ -0.33
SHKBP1-208ENST00000595726 CABS1Q96KC9 395 aa12.98□□□□□ -0.33
SHKBP1-208ENST00000595726 GPATCH1Q9BRR8 931 aaKnown RBP12.98□□□□□ -0.33
SHKBP1-208ENST00000595726 TUBB6Q9BUF5 446 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms