RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 PIP5KL1Q5T9C9 394 aa19■□□□□ 0.63
CLIP3-206ENST00000593074 BORAQ6PGQ7 559 aa19■□□□□ 0.63
CLIP3-206ENST00000593074 DOK6Q6PKX4 331 aa19■□□□□ 0.63
CLIP3-206ENST00000593074 CRTC3Q6UUV7 619 aa19■□□□□ 0.63
CLIP3-206ENST00000593074 USP51Q70EK9 711 aa19■□□□□ 0.63
CLIP3-206ENST00000593074 CAMKMTQ7Z624 323 aa19■□□□□ 0.63
CLIP3-206ENST00000593074 GALNT15Q8N3T1 639 aa19■□□□□ 0.63
CLIP3-206ENST00000593074 FGF14Q92915 247 aa19■□□□□ 0.63
CLIP3-206ENST00000593074 FBXL20Q96IG2 436 aa19■□□□□ 0.63
CLIP3-206ENST00000593074 PANX1Q96RD7 426 aa19■□□□□ 0.63
CLIP3-206ENST00000593074 TRMT61BQ9BVS5 477 aaKnown RBP19■□□□□ 0.63
CLIP3-206ENST00000593074 MAPRE3Q9UPY8 281 aa19■□□□□ 0.63
CLIP3-206ENST00000593074 SH2B3Q9UQQ2 575 aa19■□□□□ 0.63
CLIP3-206ENST00000593074 MGAT4DA6NG13 374 aa18.99■□□□□ 0.63
CLIP3-206ENST00000593074 ENO4A6NNW6 628 aa18.99■□□□□ 0.63
CLIP3-206ENST00000593074 FPGTO14772 594 aa18.99■□□□□ 0.63
CLIP3-206ENST00000593074 ALPLP05186 524 aa18.99■□□□□ 0.63
CLIP3-206ENST00000593074 MYCLP1P12525 358 aaPredicted RBP18.99■□□□□ 0.63
CLIP3-206ENST00000593074 WASP42768 502 aa18.99■□□□□ 0.63
CLIP3-206ENST00000593074 ADARB1P78563 741 aaKnown RBP18.99■□□□□ 0.63
CLIP3-206ENST00000593074 NFE2L1Q14494 772 aa18.99■□□□□ 0.63
CLIP3-206ENST00000593074 ADAMTSL4Q6UY14 1074 aa18.99■□□□□ 0.63
CLIP3-206ENST00000593074 TRMT11Q7Z4G4 463 aaKnown RBP18.99■□□□□ 0.63
CLIP3-206ENST00000593074 CHPFQ8IZ52 775 aa18.99■□□□□ 0.63
CLIP3-206ENST00000593074 NETO1Q8TDF5 533 aa18.99■□□□□ 0.63
CLIP3-206ENST00000593074 EFCAB11Q9BUY7 163 aa18.99■□□□□ 0.63
CLIP3-206ENST00000593074 COMMD3-BMI1R4GMX3 469 aa18.99■□□□□ 0.63
CLIP3-206ENST00000593074 EVPLLA8MZ36 301 aa18.99■□□□□ 0.63
CLIP3-206ENST00000593074 H0YAE9 185 aa18.99■□□□□ 0.63
CLIP3-206ENST00000593074 VILLO15195 856 aa18.99■□□□□ 0.63
CLIP3-206ENST00000593074 HPRP00739 348 aa18.99■□□□□ 0.63
CLIP3-206ENST00000593074 SERPINA1P01009 418 aa18.99■□□□□ 0.63
CLIP3-206ENST00000593074 TAP2Q03519 686 aa18.99■□□□□ 0.63
CLIP3-206ENST00000593074 DAG1Q14118 895 aa18.99■□□□□ 0.63
CLIP3-206ENST00000593074 SF1Q15637 639 aaKnown RBP18.99■□□□□ 0.63
CLIP3-206ENST00000593074 CATSPEREQ5SY80 951 aa18.99■□□□□ 0.63
CLIP3-206ENST00000593074 OTUD3Q5T2D3 398 aaPredicted RBP18.99■□□□□ 0.63
CLIP3-206ENST00000593074 GALNT18Q6P9A2 607 aa18.99■□□□□ 0.63
CLIP3-206ENST00000593074 UNC5DQ6UXZ4 953 aa18.99■□□□□ 0.63
CLIP3-206ENST00000593074 RBM44Q6ZP01 1051 aaKnown RBP18.99■□□□□ 0.63
CLIP3-206ENST00000593074 PATL1Q86TB9 770 aaKnown RBP18.99■□□□□ 0.63
CLIP3-206ENST00000593074 LAS2Q8IYD9 372 aa18.99■□□□□ 0.63
CLIP3-206ENST00000593074 PLA2G15Q8NCC3 412 aa18.99■□□□□ 0.63
CLIP3-206ENST00000593074 RPP25Q9BUL9 199 aaKnown RBP18.99■□□□□ 0.63
CLIP3-206ENST00000593074 ZDHHC5Q9C0B5 715 aa18.99■□□□□ 0.63
CLIP3-206ENST00000593074 OR52A5Q9H2C5 316 aa18.99■□□□□ 0.63
CLIP3-206ENST00000593074 DMTF1Q9Y222 760 aa18.99■□□□□ 0.63
CLIP3-206ENST00000593074 DYRK1BQ9Y463 629 aa18.99■□□□□ 0.63
CLIP3-206ENST00000593074 C5orf42Q9H799 3197 aa18.99■□□□□ 0.63
CLIP3-206ENST00000593074 TRIM64CA6NLI5 447 aa18.98■□□□□ 0.63
CLIP3-206ENST00000593074 CLIC1O00299 241 aa18.98■□□□□ 0.63
CLIP3-206ENST00000593074 FOXE1O00358 373 aaPredicted RBP18.98■□□□□ 0.63
CLIP3-206ENST00000593074 CST1P01037 141 aa18.98■□□□□ 0.63
CLIP3-206ENST00000593074 TIA1P31483 386 aaKnown RBP eCLIP18.98■□□□□ 0.63
CLIP3-206ENST00000593074 RPS13P62277 151 aaKnown RBP18.98■□□□□ 0.63
CLIP3-206ENST00000593074 ADAM15Q13444 863 aa18.98■□□□□ 0.63
CLIP3-206ENST00000593074 STARD3Q14849 445 aa18.98■□□□□ 0.63
CLIP3-206ENST00000593074 TTC33Q6PID6 262 aaPredicted RBP18.98■□□□□ 0.63
CLIP3-206ENST00000593074 SLC30A9Q6PML9 568 aa18.98■□□□□ 0.63
CLIP3-206ENST00000593074 SIRT5Q9NXA8 310 aa18.98■□□□□ 0.63
CLIP3-206ENST00000593074 UTS2RQ9UKP6 389 aa18.98■□□□□ 0.63
CLIP3-206ENST00000593074 ERVK-11Q9UQG0 969 aa18.98■□□□□ 0.63
CLIP3-206ENST00000593074 PCYT1BQ9Y5K3 369 aaPredicted RBP18.98■□□□□ 0.63
CLIP3-206ENST00000593074 PCM1Q15154 2024 aa18.98■□□□□ 0.63
CLIP3-206ENST00000593074 YY2O15391 372 aa18.97■□□□□ 0.63
CLIP3-206ENST00000593074 EPN2O95208 641 aa18.97■□□□□ 0.63
CLIP3-206ENST00000593074 ANXA4P09525 319 aaPredicted RBP18.97■□□□□ 0.63
CLIP3-206ENST00000593074 C1GALT1C1LP0DN25 315 aa18.97■□□□□ 0.63
CLIP3-206ENST00000593074 LAMP1P11279 417 aa18.97■□□□□ 0.63
CLIP3-206ENST00000593074 GPX2P18283 190 aa18.97■□□□□ 0.63
CLIP3-206ENST00000593074 DRD3P35462 400 aa18.97■□□□□ 0.63
CLIP3-206ENST00000593074 ALDH3B2P48448 385 aa18.97■□□□□ 0.63
CLIP3-206ENST00000593074 SLBPQ14493 270 aaKnown RBP eCLIP18.97■□□□□ 0.63
CLIP3-206ENST00000593074 PAGE2BQ5JRK9 111 aa18.97■□□□□ 0.63
CLIP3-206ENST00000593074 FAM83HQ6ZRV2 1179 aaPredicted RBP18.97■□□□□ 0.63
CLIP3-206ENST00000593074 PDZD3Q86UT5 571 aa18.97■□□□□ 0.63
CLIP3-206ENST00000593074 ZDHHC13Q8IUH4 622 aa18.97■□□□□ 0.63
CLIP3-206ENST00000593074 EID3Q8N140 333 aa18.97■□□□□ 0.63
CLIP3-206ENST00000593074 PGBD3Q8N328 593 aa18.97■□□□□ 0.63
CLIP3-206ENST00000593074 ZNF786Q8N393 782 aa18.97■□□□□ 0.63
CLIP3-206ENST00000593074 SVOPLQ8N434 492 aa18.97■□□□□ 0.63
CLIP3-206ENST00000593074 CDC26Q8NHZ8 85 aa18.97■□□□□ 0.63
CLIP3-206ENST00000593074 ZFAND2BQ8WV99 257 aa18.97■□□□□ 0.63
CLIP3-206ENST00000593074 RDH12Q96NR8 316 aa18.97■□□□□ 0.63
CLIP3-206ENST00000593074 DUSP26Q9BV47 211 aa18.97■□□□□ 0.63
CLIP3-206ENST00000593074 S1PR5Q9H228 398 aa18.97■□□□□ 0.63
CLIP3-206ENST00000593074 TUBA8Q9NY65 449 aaPredicted RBP18.97■□□□□ 0.63
CLIP3-206ENST00000593074 BTBD3Q9Y2F9 522 aa18.97■□□□□ 0.63
CLIP3-206ENST00000593074 PIPSLA2A3N6 862 aa18.97■□□□□ 0.63
CLIP3-206ENST00000593074 CCNDBP1O95273 360 aa18.97■□□□□ 0.63
CLIP3-206ENST00000593074 CLIC3O95833 236 aa18.97■□□□□ 0.63
CLIP3-206ENST00000593074 ENGP17813 658 aa18.97■□□□□ 0.63
CLIP3-206ENST00000593074 RPA4Q13156 261 aa18.97■□□□□ 0.63
CLIP3-206ENST00000593074 ENPP2Q13822 863 aa18.97■□□□□ 0.63
CLIP3-206ENST00000593074 CST6Q15828 149 aa18.97■□□□□ 0.63
CLIP3-206ENST00000593074 ABRAXAS1Q6UWZ7 409 aa18.97■□□□□ 0.63
CLIP3-206ENST00000593074 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.97■□□□□ 0.63
CLIP3-206ENST00000593074 CLECL1Q8IZS7 167 aa18.97■□□□□ 0.63
CLIP3-206ENST00000593074 ZCCHC7Q8N3Z6 543 aaKnown RBP18.97■□□□□ 0.63
CLIP3-206ENST00000593074 SLC5A11Q8WWX8 675 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms