RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 MLPHQ9BV36 600 aaPredicted RBP3.32□□□□□ -1.88
VMP1-212ENST00000591782 TRIM62Q9BVG3 475 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 ACAT2Q9BWD1 397 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 MRPL1Q9BYD6 325 aaKnown RBP3.32□□□□□ -1.88
VMP1-212ENST00000591782 PUS3Q9BZE2 481 aaKnown RBP3.32□□□□□ -1.88
VMP1-212ENST00000591782 YIPF3Q9GZM5 350 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 TMEM39BQ9GZU3 492 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 FAM192AQ9GZU8 254 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 C1orf21Q9H246 121 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 LRMDAQ9H2I8 198 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 TRPV4Q9HBA0 871 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 C12orf4Q9NQ89 552 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 RPRD1BQ9NQG5 326 aaKnown RBP3.32□□□□□ -1.88
VMP1-212ENST00000591782 HPS4Q9NQG7 708 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 PAG1Q9NWQ8 432 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 ADPRHL2Q9NX46 363 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 PKD2L2Q9NZM6 624 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 KLHL9Q9P2J3 617 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 TBC1D29Q9UFV1 150 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 ZNF112Q9UJU3 913 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 GGA2Q9UJY4 613 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 PSME2Q9UL46 239 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 ZNF215Q9UL58 517 aaPredicted RBP3.32□□□□□ -1.88
VMP1-212ENST00000591782 DLGAP4Q9Y2H0 992 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 WBP11Q9Y2W2 641 aaKnown RBP3.32□□□□□ -1.88
VMP1-212ENST00000591782 CMAHPQ9Y471 501 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 TIMM22Q9Y584 194 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 TRPV2Q9Y5S1 764 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 FRMPD4Q14CM0 1322 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 WDR19Q8NEZ3 1342 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 CNTNAP2Q9UHC6 1331 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 KIF24Q5T7B8 1368 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 ANKRD30AQ9BXX3 1397 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 CNTLNQ9NXG0 1405 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 WDR7Q9Y4E6 1490 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 LAMC3Q9Y6N6 1575 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 WDR97A6NE52 1622 aa3.32□□□□□ -1.88
VMP1-212ENST00000591782 ARHGAP31Q2M1Z3 1444 aa3.31□□□□□ -1.88
VMP1-212ENST00000591782 ZCWPW2A0A1B0GU75 182 aa3.31□□□□□ -1.88
VMP1-212ENST00000591782 OR5K3A6NET4 321 aa3.31□□□□□ -1.88
VMP1-212ENST00000591782 CDRT15L2A8MXV6 281 aa3.31□□□□□ -1.88
VMP1-212ENST00000591782 TMEM178BH3BS89 294 aa3.31□□□□□ -1.88
VMP1-212ENST00000591782 EIF3DO15371 548 aaKnown RBP eCLIP3.31□□□□□ -1.88
VMP1-212ENST00000591782 KRT86O43790 486 aa3.31□□□□□ -1.88
VMP1-212ENST00000591782 KRT36O76013 467 aa3.31□□□□□ -1.88
VMP1-212ENST00000591782 ZNF432O94892 652 aa3.31□□□□□ -1.88
VMP1-212ENST00000591782 GOSR1O95249 250 aa3.31□□□□□ -1.88
VMP1-212ENST00000591782 MBD3O95983 291 aa3.31□□□□□ -1.88
VMP1-212ENST00000591782 ASGR1P07306 291 aa3.31□□□□□ -1.88
VMP1-212ENST00000591782 POU2F1P14859 743 aa3.31□□□□□ -1.88
VMP1-212ENST00000591782 ALOX12P18054 663 aa3.31□□□□□ -1.88
VMP1-212ENST00000591782 HRH2P25021 359 aa3.31□□□□□ -1.88
VMP1-212ENST00000591782 CRABP2P29373 138 aa3.31□□□□□ -1.88
VMP1-212ENST00000591782 HOXA13P31271 388 aaPredicted RBP3.31□□□□□ -1.88
VMP1-212ENST00000591782 BMI1P35226 326 aa3.31□□□□□ -1.88
VMP1-212ENST00000591782 STARP49675 285 aa3.31□□□□□ -1.88
VMP1-212ENST00000591782 SRP54P61011 504 aaKnown RBP3.31□□□□□ -1.88
VMP1-212ENST00000591782 RAB4BP61018 213 aa3.31□□□□□ -1.88
VMP1-212ENST00000591782 CREB5Q02930 508 aa3.31□□□□□ -1.88
VMP1-212ENST00000591782 AIMP1Q12904 312 aaKnown RBP3.31□□□□□ -1.88
VMP1-212ENST00000591782 CALCOCO2Q13137 446 aa3.31□□□□□ -1.88
VMP1-212ENST00000591782 RIPK1Q13546 671 aa3.31□□□□□ -1.88
VMP1-212ENST00000591782 RAPSNQ13702 412 aa3.31□□□□□ -1.88
VMP1-212ENST00000591782 EFTUD2Q15029 972 aaKnown RBP eCLIP3.31□□□□□ -1.884e-29■■□□□ 12.2
VMP1-212ENST00000591782 MEA1Q16626 185 aa3.31□□□□□ -1.88
VMP1-212ENST00000591782 MOGQ16653 247 aa3.31□□□□□ -1.88
VMP1-212ENST00000591782 TMEM266Q2M3C6 531 aa3.31□□□□□ -1.88
VMP1-212ENST00000591782 DUSP28Q4G0W2 176 aa3.31□□□□□ -1.88
VMP1-212ENST00000591782 CCDC58Q4VC31 144 aa3.31□□□□□ -1.88
VMP1-212ENST00000591782 SLC39A12Q504Y0 691 aa3.31□□□□□ -1.88
VMP1-212ENST00000591782 IGSF11Q5DX21 431 aa3.31□□□□□ -1.88
VMP1-212ENST00000591782 MDH1BQ5I0G3 518 aa3.31□□□□□ -1.88
VMP1-212ENST00000591782 RARS2Q5T160 578 aaKnown RBP3.31□□□□□ -1.88
VMP1-212ENST00000591782 IL23RQ5VWK5 629 aa3.31□□□□□ -1.88
VMP1-212ENST00000591782 PTRHD1Q6GMV3 140 aaKnown RBP3.31□□□□□ -1.88
VMP1-212ENST00000591782 SLC30A6Q6NXT4 461 aa3.31□□□□□ -1.88
VMP1-212ENST00000591782 FAM171BQ6P995 826 aa3.31□□□□□ -1.88
VMP1-212ENST00000591782 TTC5Q8N0Z6 440 aa3.31□□□□□ -1.88
VMP1-212ENST00000591782 OR8H3Q8N146 312 aa3.31□□□□□ -1.88
VMP1-212ENST00000591782 MUC20Q8N307 709 aaPredicted RBP3.31□□□□□ -1.88
VMP1-212ENST00000591782 ARL14Q8N4G2 192 aa3.31□□□□□ -1.88
VMP1-212ENST00000591782 ZNF565Q8N9K5 539 aa3.31□□□□□ -1.88
VMP1-212ENST00000591782 TRPV1Q8NER1 839 aa3.31□□□□□ -1.88
VMP1-212ENST00000591782 OR6S1Q8NH40 331 aa3.31□□□□□ -1.88
VMP1-212ENST00000591782 CLHC1Q8NHS4 586 aa3.31□□□□□ -1.88
VMP1-212ENST00000591782 TMEM255BQ8WV15 326 aa3.31□□□□□ -1.88
VMP1-212ENST00000591782 HAUS1Q96CS2 278 aa3.31□□□□□ -1.88
VMP1-212ENST00000591782 FAM120BQ96EK7 910 aaKnown RBP3.31□□□□□ -1.88
VMP1-212ENST00000591782 SLC47A1Q96FL8 570 aa3.31□□□□□ -1.88
VMP1-212ENST00000591782 IFT74Q96LB3 600 aa3.31□□□□□ -1.88
VMP1-212ENST00000591782 OLFM3Q96PB7 478 aa3.31□□□□□ -1.88
VMP1-212ENST00000591782 PLIN2Q99541 437 aa3.31□□□□□ -1.88
VMP1-212ENST00000591782 GFI1Q99684 422 aa3.31□□□□□ -1.88
VMP1-212ENST00000591782 CITED2Q99967 270 aaPredicted RBP3.31□□□□□ -1.88
VMP1-212ENST00000591782 SLF1Q9BQI6 1058 aa3.31□□□□□ -1.88
VMP1-212ENST00000591782 NEURL2Q9BR09 285 aa3.31□□□□□ -1.88
VMP1-212ENST00000591782 C9orf16Q9BUW7 83 aa3.31□□□□□ -1.88
VMP1-212ENST00000591782 CARD6Q9BX69 1037 aa3.31□□□□□ -1.88
VMP1-212ENST00000591782 TRIM15Q9C019 465 aa3.31□□□□□ -1.88
VMP1-212ENST00000591782 KRT23Q9C075 422 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms