RNA–Protein interactions for RNA: ENST00000590701.5

ERCC1-211, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 3

Gene ERCC1, Length 345 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-211ENST00000590701 TMEM178AQ8NBL3 297 aa13.78□□□□□ -0.2
ERCC1-211ENST00000590701 OR9A4Q8NGU2 314 aa13.78□□□□□ -0.2
ERCC1-211ENST00000590701 LILRB4Q8NHJ6 448 aa13.78□□□□□ -0.2
ERCC1-211ENST00000590701 PPP1R2P1Q96PQ5 205 aa13.78□□□□□ -0.2
ERCC1-211ENST00000590701 TTC1Q99614 292 aa13.78□□□□□ -0.2
ERCC1-211ENST00000590701 OSBPL8Q9BZF1 889 aa13.78□□□□□ -0.2
ERCC1-211ENST00000590701 DRC3Q9H069 523 aa13.78□□□□□ -0.2
ERCC1-211ENST00000590701 CDCP1Q9H5V8 836 aa13.78□□□□□ -0.2
ERCC1-211ENST00000590701 MRPS30Q9NP92 439 aaKnown RBP13.78□□□□□ -0.2
ERCC1-211ENST00000590701 LRFN1Q9P244 771 aa13.78□□□□□ -0.2
ERCC1-211ENST00000590701 INTUQ9ULD6 942 aa13.78□□□□□ -0.2
ERCC1-211ENST00000590701 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.78□□□□□ -0.2
ERCC1-211ENST00000590701 A0A1B0GTH9 108 aa13.77□□□□□ -0.21
ERCC1-211ENST00000590701 F8W8V4 182 aa13.77□□□□□ -0.21
ERCC1-211ENST00000590701 PJA2O43164 708 aa13.77□□□□□ -0.21
ERCC1-211ENST00000590701 TPOP07202 933 aa13.77□□□□□ -0.21
ERCC1-211ENST00000590701 NR0B1P51843 470 aaKnown RBP13.77□□□□□ -0.21
ERCC1-211ENST00000590701 FASTKD1Q53R41 847 aaKnown RBP13.77□□□□□ -0.21
ERCC1-211ENST00000590701 TSTD2Q5T7W7 516 aa13.77□□□□□ -0.21
ERCC1-211ENST00000590701 GARNL3Q5VVW2 1013 aa13.77□□□□□ -0.21
ERCC1-211ENST00000590701 CAVIN1Q6NZI2 390 aaKnown RBP13.77□□□□□ -0.21
ERCC1-211ENST00000590701 PRSS41Q7RTY9 318 aa13.77□□□□□ -0.21
ERCC1-211ENST00000590701 CD163Q86VB7 1156 aa13.77□□□□□ -0.21
ERCC1-211ENST00000590701 CCDC71Q8IV32 467 aaPredicted RBP13.77□□□□□ -0.21
ERCC1-211ENST00000590701 RPRMLQ8N4K4 120 aa13.77□□□□□ -0.21
ERCC1-211ENST00000590701 RAB42Q8N4Z0 105 aa13.77□□□□□ -0.21
ERCC1-211ENST00000590701 FOXC2Q99958 501 aa13.77□□□□□ -0.21
ERCC1-211ENST00000590701 MACROD1Q9BQ69 325 aa13.77□□□□□ -0.21
ERCC1-211ENST00000590701 TSSK1BQ9BXA7 367 aa13.77□□□□□ -0.21
ERCC1-211ENST00000590701 CXXC4Q9H2H0 198 aa13.77□□□□□ -0.21
ERCC1-211ENST00000590701 ABHD10Q9NUJ1 306 aa13.77□□□□□ -0.21
ERCC1-211ENST00000590701 MARCH4Q9P2E8 410 aaPredicted RBP13.77□□□□□ -0.21
ERCC1-211ENST00000590701 FOXO6A8MYZ6 492 aa13.76□□□□□ -0.21
ERCC1-211ENST00000590701 VPS26AO75436 327 aa13.76□□□□□ -0.21
ERCC1-211ENST00000590701 DRD2P14416 443 aa13.76□□□□□ -0.21
ERCC1-211ENST00000590701 ZNF24P17028 368 aa13.76□□□□□ -0.21
ERCC1-211ENST00000590701 PTGS2P35354 604 aa13.76□□□□□ -0.21
ERCC1-211ENST00000590701 RFC3P40938 356 aa13.76□□□□□ -0.21
ERCC1-211ENST00000590701 GRIA1P42261 906 aa13.76□□□□□ -0.21
ERCC1-211ENST00000590701 MAGEA1P43355 309 aa13.76□□□□□ -0.21
ERCC1-211ENST00000590701 HADHBP55084 474 aaKnown RBP13.76□□□□□ -0.21
ERCC1-211ENST00000590701 GDF10P55107 478 aa13.76□□□□□ -0.21
ERCC1-211ENST00000590701 COPS2P61201 443 aa13.76□□□□□ -0.21
ERCC1-211ENST00000590701 FOXD4Q12950 439 aaPredicted RBP13.76□□□□□ -0.21
ERCC1-211ENST00000590701 TMED2Q15363 201 aa13.76□□□□□ -0.21
ERCC1-211ENST00000590701 CES4AQ5XG92 561 aa13.76□□□□□ -0.21
ERCC1-211ENST00000590701 PTRHD1Q6GMV3 140 aaKnown RBP13.76□□□□□ -0.21
ERCC1-211ENST00000590701 AFTPHQ6ULP2 937 aa13.76□□□□□ -0.21
ERCC1-211ENST00000590701 ZNF227Q86WZ6 799 aa13.76□□□□□ -0.21
ERCC1-211ENST00000590701 FAM98AQ8NCA5 519 aaKnown RBP13.76□□□□□ -0.21
ERCC1-211ENST00000590701 OR51Q1Q8NH59 317 aa13.76□□□□□ -0.21
ERCC1-211ENST00000590701 GSDMBQ8TAX9 411 aa13.76□□□□□ -0.21
ERCC1-211ENST00000590701 FAM57AQ8TBR7 257 aa13.76□□□□□ -0.21
ERCC1-211ENST00000590701 M1APQ8TC57 530 aa13.76□□□□□ -0.21
ERCC1-211ENST00000590701 KCNJ16Q9NPI9 418 aa13.76□□□□□ -0.21
ERCC1-211ENST00000590701 ABCF3Q9NUQ8 709 aa13.76□□□□□ -0.21
ERCC1-211ENST00000590701 HCN3Q9P1Z3 774 aa13.76□□□□□ -0.21
ERCC1-211ENST00000590701 PCYOX1Q9UHG3 505 aa13.76□□□□□ -0.21
ERCC1-211ENST00000590701 PHF3Q92576 2039 aaKnown RBP13.76□□□□□ -0.21
ERCC1-211ENST00000590701 GOLGA6L22H0YM25 854 aa13.75□□□□□ -0.21
ERCC1-211ENST00000590701 PRMT5O14744 637 aaPredicted RBP13.75□□□□□ -0.21
ERCC1-211ENST00000590701 FAM155BO75949 473 aa13.75□□□□□ -0.21
ERCC1-211ENST00000590701 PDE9AO76083 593 aa13.75□□□□□ -0.21
ERCC1-211ENST00000590701 SUN1O94901 812 aa13.75□□□□□ -0.21
ERCC1-211ENST00000590701 HOXD4P09016 255 aaPredicted RBP13.75□□□□□ -0.21
ERCC1-211ENST00000590701 MSX1P28360 303 aa13.75□□□□□ -0.21
ERCC1-211ENST00000590701 RPA3P35244 121 aaPredicted RBP13.75□□□□□ -0.21
ERCC1-211ENST00000590701 AVPR1BP47901 424 aa13.75□□□□□ -0.21
ERCC1-211ENST00000590701 PPP2R2AP63151 447 aa13.75□□□□□ -0.21
ERCC1-211ENST00000590701 PRDX1Q06830 199 aaKnown RBP13.75□□□□□ -0.21
ERCC1-211ENST00000590701 ACTN3Q08043 901 aaPredicted RBP13.75□□□□□ -0.21
ERCC1-211ENST00000590701 FAM53BQ14153 422 aa13.75□□□□□ -0.21
ERCC1-211ENST00000590701 CEBPEQ15744 281 aa13.75□□□□□ -0.21
ERCC1-211ENST00000590701 SFT2D3Q587I9 215 aa13.75□□□□□ -0.21
ERCC1-211ENST00000590701 ZNF425Q6IV72 752 aa13.75□□□□□ -0.21
ERCC1-211ENST00000590701 Q71RC1 249 aaPredicted RBP13.75□□□□□ -0.21
ERCC1-211ENST00000590701 SPNS2Q8IVW8 549 aa13.75□□□□□ -0.21
ERCC1-211ENST00000590701 PPFIBP2Q8ND30 876 aa13.75□□□□□ -0.21
ERCC1-211ENST00000590701 CHDHQ8NE62 594 aaPredicted RBP13.75□□□□□ -0.21
ERCC1-211ENST00000590701 OR9A1PQ8NGU1 263 aa13.75□□□□□ -0.21
ERCC1-211ENST00000590701 ASB5Q8WWX0 329 aa13.75□□□□□ -0.21
ERCC1-211ENST00000590701 RERGQ96A58 199 aaPredicted RBP13.75□□□□□ -0.21
ERCC1-211ENST00000590701 CCDC138Q96M89 665 aa13.75□□□□□ -0.21
ERCC1-211ENST00000590701 MMP25Q9NPA2 562 aa13.75□□□□□ -0.21
ERCC1-211ENST00000590701 C19orf25Q9UFG5 118 aaPredicted RBP13.75□□□□□ -0.21
ERCC1-211ENST00000590701 TAC3Q9UHF0 121 aa13.75□□□□□ -0.21
ERCC1-211ENST00000590701 GNPTGQ9UJJ9 305 aa13.75□□□□□ -0.21
ERCC1-211ENST00000590701 EFR3BQ9Y2G0 817 aa13.75□□□□□ -0.21
ERCC1-211ENST00000590701 PCDHA3Q9Y5H8 950 aa13.75□□□□□ -0.21
ERCC1-211ENST00000590701 ZNF407Q9C0G0 2248 aa13.75□□□□□ -0.21
ERCC1-211ENST00000590701 DNAJC13O75165 2243 aa13.74□□□□□ -0.21
ERCC1-211ENST00000590701 NDC80O14777 642 aa13.74□□□□□ -0.21
ERCC1-211ENST00000590701 HAT1O14929 419 aa13.74□□□□□ -0.21
ERCC1-211ENST00000590701 PSMD3O43242 534 aa13.74□□□□□ -0.21
ERCC1-211ENST00000590701 CDC40O60508 579 aaKnown RBP eCLIP13.74□□□□□ -0.21
ERCC1-211ENST00000590701 SLC25A12O75746 678 aa13.74□□□□□ -0.21
ERCC1-211ENST00000590701 ZWINTO95229 277 aa13.74□□□□□ -0.21
ERCC1-211ENST00000590701 CCNFP41002 786 aa13.74□□□□□ -0.21
ERCC1-211ENST00000590701 XCR1P46094 333 aa13.74□□□□□ -0.21
ERCC1-211ENST00000590701 ACVR1Q04771 509 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms