RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 PCDH17O14917 1159 aa10.1□□□□□ -0.79
CLPTM1-211ENST00000589347 ITGA3P26006 1051 aa10.1□□□□□ -0.79
CLPTM1-211ENST00000589347 VARSP26640 1264 aaKnown RBP10.1□□□□□ -0.79
CLPTM1-211ENST00000589347 OR1D4P47884 311 aa10.1□□□□□ -0.79
CLPTM1-211ENST00000589347 AVPR1BP47901 424 aa10.1□□□□□ -0.79
CLPTM1-211ENST00000589347 CDKN2DP55273 166 aa10.1□□□□□ -0.79
CLPTM1-211ENST00000589347 SKP1P63208 163 aa10.1□□□□□ -0.79
CLPTM1-211ENST00000589347 CAV1Q03135 178 aa10.1□□□□□ -0.79
CLPTM1-211ENST00000589347 AIMP2Q13155 320 aaKnown RBP10.1□□□□□ -0.79
CLPTM1-211ENST00000589347 PRTGQ2VWP7 1150 aa10.1□□□□□ -0.79
CLPTM1-211ENST00000589347 FAM69BQ5VUD6 431 aa10.1□□□□□ -0.79
CLPTM1-211ENST00000589347 ZNF425Q6IV72 752 aa10.1□□□□□ -0.79
CLPTM1-211ENST00000589347 TRMT10BQ6PF06 316 aaKnown RBP10.1□□□□□ -0.79
CLPTM1-211ENST00000589347 AGTRAPQ6RW13 159 aa10.1□□□□□ -0.79
CLPTM1-211ENST00000589347 LCTLQ6UWM7 567 aa10.1□□□□□ -0.79
CLPTM1-211ENST00000589347 CYHR1Q6ZMK1 362 aa10.1□□□□□ -0.79
CLPTM1-211ENST00000589347 COX15Q7KZN9 410 aa10.1□□□□□ -0.79
CLPTM1-211ENST00000589347 PPP1R32Q7Z5V6 425 aa10.1□□□□□ -0.79
CLPTM1-211ENST00000589347 IGDCC3Q8IVU1 814 aa10.1□□□□□ -0.79
CLPTM1-211ENST00000589347 GALNT16Q8N428 558 aa10.1□□□□□ -0.79
CLPTM1-211ENST00000589347 NKAPQ8N5F7 415 aaKnown RBP10.1□□□□□ -0.79
CLPTM1-211ENST00000589347 CAMKVQ8NCB2 501 aa10.1□□□□□ -0.79
CLPTM1-211ENST00000589347 SPATA4Q8NEY3 305 aa10.1□□□□□ -0.79
CLPTM1-211ENST00000589347 ALKBH8Q96BT7 664 aaKnown RBP10.1□□□□□ -0.79
CLPTM1-211ENST00000589347 THAP11Q96EK4 314 aa10.1□□□□□ -0.79
CLPTM1-211ENST00000589347 C10orf90Q96M02 699 aa10.1□□□□□ -0.79
CLPTM1-211ENST00000589347 SPSB2Q99619 263 aa10.1□□□□□ -0.79
CLPTM1-211ENST00000589347 ERP44Q9BS26 406 aa10.1□□□□□ -0.79
CLPTM1-211ENST00000589347 YIPF2Q9BWQ6 316 aa10.1□□□□□ -0.79
CLPTM1-211ENST00000589347 FAM129AQ9BZQ8 928 aa10.1□□□□□ -0.79
CLPTM1-211ENST00000589347 DPH5Q9H2P9 285 aa10.1□□□□□ -0.79
CLPTM1-211ENST00000589347 MKKSQ9NPJ1 570 aaPredicted RBP10.1□□□□□ -0.79
CLPTM1-211ENST00000589347 ATP13A2Q9NQ11 1180 aa10.1□□□□□ -0.79
CLPTM1-211ENST00000589347 TMEM184CQ9NVA4 438 aa10.1□□□□□ -0.79
CLPTM1-211ENST00000589347 ARL15Q9NXU5 204 aa10.1□□□□□ -0.79
CLPTM1-211ENST00000589347 SLC17A6Q9P2U8 582 aa10.1□□□□□ -0.79
CLPTM1-211ENST00000589347 CTSFQ9UBX1 484 aa10.1□□□□□ -0.79
CLPTM1-211ENST00000589347 PDE10AQ9Y233 779 aa10.1□□□□□ -0.79
CLPTM1-211ENST00000589347 PLAAQ9Y263 795 aa10.1□□□□□ -0.79
CLPTM1-211ENST00000589347 RUVBL1Q9Y265 456 aaKnown RBP10.1□□□□□ -0.79
CLPTM1-211ENST00000589347 VWA7Q9Y334 891 aa10.1□□□□□ -0.79
CLPTM1-211ENST00000589347 MAU2Q9Y6X3 613 aa10.1□□□□□ -0.79
CLPTM1-211ENST00000589347 LOC105369274A0A096LPK9 316 aa10.09□□□□□ -0.79
CLPTM1-211ENST00000589347 IGKV1-8A0A0C4DH67 115 aa10.09□□□□□ -0.79
CLPTM1-211ENST00000589347 LOC102723532A0A0G2JNH3 316 aa10.09□□□□□ -0.79
CLPTM1-211ENST00000589347 RAD51CO43502 376 aa10.09□□□□□ -0.79
CLPTM1-211ENST00000589347 NRP2O60462 931 aa10.09□□□□□ -0.79
CLPTM1-211ENST00000589347 UMODP07911 640 aa10.09□□□□□ -0.79
CLPTM1-211ENST00000589347 SLC35G6P0C7Q6 338 aa10.09□□□□□ -0.79
CLPTM1-211ENST00000589347 ZNF37AP17032 561 aaPredicted RBP10.09□□□□□ -0.79
CLPTM1-211ENST00000589347 POU3F2P20265 443 aaPredicted RBP10.09□□□□□ -0.79
CLPTM1-211ENST00000589347 SAT1P21673 171 aa10.09□□□□□ -0.79
CLPTM1-211ENST00000589347 GABRB3P28472 473 aa10.09□□□□□ -0.79
CLPTM1-211ENST00000589347 ETF1P62495 437 aaKnown RBP10.09□□□□□ -0.79
CLPTM1-211ENST00000589347 AP2B1P63010 937 aa10.09□□□□□ -0.79
CLPTM1-211ENST00000589347 DSG2Q14126 1118 aa10.09□□□□□ -0.79
CLPTM1-211ENST00000589347 FAM53BQ14153 422 aa10.09□□□□□ -0.79
CLPTM1-211ENST00000589347 MYBPC3Q14896 1274 aa10.09□□□□□ -0.79
CLPTM1-211ENST00000589347 HKDC1Q2TB90 917 aa10.09□□□□□ -0.79
CLPTM1-211ENST00000589347 DUPD1Q68J44 220 aa10.09□□□□□ -0.79
CLPTM1-211ENST00000589347 SYT10Q6XYQ8 523 aa10.09□□□□□ -0.79
CLPTM1-211ENST00000589347 CAPN12Q6ZSI9 719 aa10.09□□□□□ -0.79
CLPTM1-211ENST00000589347 STRA8Q7Z7C7 330 aa10.09□□□□□ -0.79
CLPTM1-211ENST00000589347 ADAMTSL2Q86TH1 951 aa10.09□□□□□ -0.79
CLPTM1-211ENST00000589347 TICAM1Q8IUC6 712 aa10.09□□□□□ -0.79
CLPTM1-211ENST00000589347 LRRC56Q8IYG6 542 aaPredicted RBP10.09□□□□□ -0.79
CLPTM1-211ENST00000589347 OR4N4Q8N0Y3 316 aa10.09□□□□□ -0.79
CLPTM1-211ENST00000589347 STT3BQ8TCJ2 826 aa10.09□□□□□ -0.79
CLPTM1-211ENST00000589347 MMABQ96EY8 250 aaPredicted RBP10.09□□□□□ -0.79
CLPTM1-211ENST00000589347 TSPAN17Q96FV3 270 aa10.09□□□□□ -0.79
CLPTM1-211ENST00000589347 PWWP2AQ96N64 755 aa10.09□□□□□ -0.79
CLPTM1-211ENST00000589347 SMAD5Q99717 465 aaKnown RBP10.09□□□□□ -0.79
CLPTM1-211ENST00000589347 NUDT9Q9BW91 350 aa10.09□□□□□ -0.79
CLPTM1-211ENST00000589347 SLC29A3Q9BZD2 475 aa10.09□□□□□ -0.79
CLPTM1-211ENST00000589347 RHOJQ9H4E5 214 aa10.09□□□□□ -0.79
CLPTM1-211ENST00000589347 POPDC3Q9HBV1 291 aa10.09□□□□□ -0.79
CLPTM1-211ENST00000589347 MLXIPLQ9NP71 852 aa10.09□□□□□ -0.79
CLPTM1-211ENST00000589347 SAYSD1Q9NPB0 183 aa10.09□□□□□ -0.79
CLPTM1-211ENST00000589347 SLC22A11Q9NSA0 550 aa10.09□□□□□ -0.79
CLPTM1-211ENST00000589347 CUEDC1Q9NWM3 386 aaPredicted RBP10.09□□□□□ -0.79
CLPTM1-211ENST00000589347 FBXL4Q9UKA2 621 aa10.09□□□□□ -0.79
CLPTM1-211ENST00000589347 ADAMTS6Q9UKP5 1117 aa10.09□□□□□ -0.79
CLPTM1-211ENST00000589347 NOVA2Q9UNW9 492 aaKnown RBP10.09□□□□□ -0.79
CLPTM1-211ENST00000589347 DYRK1BQ9Y463 629 aa10.09□□□□□ -0.79
CLPTM1-211ENST00000589347 ESPL1Q14674 2120 aa10.09□□□□□ -0.79
CLPTM1-211ENST00000589347 CNTRLQ7Z7A1 2325 aa10.08□□□□□ -0.8
CLPTM1-211ENST00000589347 ZFHX3Q15911 3703 aa10.08□□□□□ -0.8
CLPTM1-211ENST00000589347 TTLL8A6PVC2 850 aa10.08□□□□□ -0.8
CLPTM1-211ENST00000589347 H7BY64 318 aa10.08□□□□□ -0.8
CLPTM1-211ENST00000589347 CNOT3O75175 753 aaKnown RBP10.08□□□□□ -0.8
CLPTM1-211ENST00000589347 PDGFAP04085 211 aa10.08□□□□□ -0.8
CLPTM1-211ENST00000589347 UQCRHP07919 91 aa10.08□□□□□ -0.8
CLPTM1-211ENST00000589347 GSTA2P09210 222 aa10.08□□□□□ -0.8
CLPTM1-211ENST00000589347 ZGLP1P0C6A0 271 aa10.08□□□□□ -0.8
CLPTM1-211ENST00000589347 ACPPP15309 386 aa10.08□□□□□ -0.8
CLPTM1-211ENST00000589347 CXCR2P25025 360 aa10.08□□□□□ -0.8
CLPTM1-211ENST00000589347 CCR8P51685 355 aa10.08□□□□□ -0.8
CLPTM1-211ENST00000589347 YBX1P67809 324 aaKnown RBP10.08□□□□□ -0.8
CLPTM1-211ENST00000589347 TIAL1Q01085 375 aaKnown RBP eCLIP10.08□□□□□ -0.8
CLPTM1-211ENST00000589347 KLC1Q07866 573 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms