RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 GABRB3P28472 473 aa13.61□□□□□ -0.23
VMP1-206ENST00000587945 TSFMP43897 325 aaKnown RBP13.61□□□□□ -0.23
VMP1-206ENST00000587945 FNTAP49354 379 aa13.61□□□□□ -0.23
VMP1-206ENST00000587945 RELAQ04206 551 aa13.61□□□□□ -0.23
VMP1-206ENST00000587945 DHX9Q08211 1270 aaKnown RBP13.61□□□□□ -0.23
VMP1-206ENST00000587945 CRYMQ14894 314 aa13.61□□□□□ -0.23
VMP1-206ENST00000587945 TLR1Q15399 786 aa13.61□□□□□ -0.23
VMP1-206ENST00000587945 PPP1R7Q15435 360 aa13.61□□□□□ -0.23
VMP1-206ENST00000587945 MSS51Q4VC12 460 aa13.61□□□□□ -0.23
VMP1-206ENST00000587945 RBM20Q5T481 1227 aaKnown RBP13.61□□□□□ -0.23
VMP1-206ENST00000587945 VN1R4Q7Z5H5 301 aa13.61□□□□□ -0.23
VMP1-206ENST00000587945 LMNTD2Q8IXW0 634 aa13.61□□□□□ -0.23
VMP1-206ENST00000587945 SIRT6Q8N6T7 355 aa13.61□□□□□ -0.23
VMP1-206ENST00000587945 C2CD4AQ8NCU7 369 aaPredicted RBP13.61□□□□□ -0.23
VMP1-206ENST00000587945 OR9A4Q8NGU2 314 aa13.61□□□□□ -0.23
VMP1-206ENST00000587945 ACTRT1Q8TDG2 376 aa13.61□□□□□ -0.23
VMP1-206ENST00000587945 EEF1AKMT1Q8WVE0 214 aa13.61□□□□□ -0.23
VMP1-206ENST00000587945 PSMF1Q92530 271 aa13.61□□□□□ -0.23
VMP1-206ENST00000587945 ALKBH8Q96BT7 664 aaKnown RBP13.61□□□□□ -0.23
VMP1-206ENST00000587945 LMF1Q96S06 567 aa13.61□□□□□ -0.23
VMP1-206ENST00000587945 FAM167BQ9BTA0 163 aa13.61□□□□□ -0.23
VMP1-206ENST00000587945 MKKSQ9NPJ1 570 aaPredicted RBP13.61□□□□□ -0.23
VMP1-206ENST00000587945 CCDC177Q9NQR7 707 aaPredicted RBP13.61□□□□□ -0.23
VMP1-206ENST00000587945 AGPAT4Q9NRZ5 378 aa13.61□□□□□ -0.23
VMP1-206ENST00000587945 C14orf105Q9NVL8 296 aa13.61□□□□□ -0.23
VMP1-206ENST00000587945 SLC17A6Q9P2U8 582 aa13.61□□□□□ -0.23
VMP1-206ENST00000587945 SH2B3Q9UQQ2 575 aa13.61□□□□□ -0.23
VMP1-206ENST00000587945 SLC5A6Q9Y289 635 aa13.61□□□□□ -0.23
VMP1-206ENST00000587945 COMMD10Q9Y6G5 202 aa13.61□□□□□ -0.23
VMP1-206ENST00000587945 IGHV1-45A0A0A0MS14 117 aa13.6□□□□□ -0.23
VMP1-206ENST00000587945 WIPF3A6NGB9 483 aa13.6□□□□□ -0.23
VMP1-206ENST00000587945 E2F3O00716 465 aa13.6□□□□□ -0.23
VMP1-206ENST00000587945 JRKO75564 520 aa13.6□□□□□ -0.23
VMP1-206ENST00000587945 CLDN1O95832 211 aa13.6□□□□□ -0.23
VMP1-206ENST00000587945 F10P00742 488 aa13.6□□□□□ -0.23
VMP1-206ENST00000587945 PGAM1P18669 254 aa13.6□□□□□ -0.23
VMP1-206ENST00000587945 PGGT1BP53609 377 aa13.6□□□□□ -0.23
VMP1-206ENST00000587945 CDKN2DP55273 166 aa13.6□□□□□ -0.23
VMP1-206ENST00000587945 TBPL1P62380 186 aa13.6□□□□□ -0.23
VMP1-206ENST00000587945 PTK6Q13882 451 aa13.6□□□□□ -0.23
VMP1-206ENST00000587945 B3GNTL1Q67FW5 361 aaPredicted RBP13.6□□□□□ -0.23
VMP1-206ENST00000587945 PAQR3Q6TCH7 311 aa13.6□□□□□ -0.23
VMP1-206ENST00000587945 PRSS41Q7RTY9 318 aa13.6□□□□□ -0.23
VMP1-206ENST00000587945 IGDCC3Q8IVU1 814 aa13.6□□□□□ -0.23
VMP1-206ENST00000587945 ST6GALNAC3Q8NDV1 305 aa13.6□□□□□ -0.23
VMP1-206ENST00000587945 OR1N1Q8NGS0 311 aa13.6□□□□□ -0.23
VMP1-206ENST00000587945 GRK7Q8WTQ7 553 aa13.6□□□□□ -0.23
VMP1-206ENST00000587945 C5orf34Q96MH7 638 aa13.6□□□□□ -0.23
VMP1-206ENST00000587945 EBNA1BP2Q99848 306 aaKnown RBP13.6□□□□□ -0.23
VMP1-206ENST00000587945 TGIF2Q9GZN2 237 aa13.6□□□□□ -0.23
VMP1-206ENST00000587945 DDX47Q9H0S4 455 aaKnown RBP13.6□□□□□ -0.23
VMP1-206ENST00000587945 ATG10Q9H0Y0 220 aa13.6□□□□□ -0.23
VMP1-206ENST00000587945 TMEM184CQ9NVA4 438 aa13.6□□□□□ -0.23
VMP1-206ENST00000587945 ASIC3Q9UHC3 531 aa13.6□□□□□ -0.23
VMP1-206ENST00000587945 MKL2Q9ULH7 1088 aa13.6□□□□□ -0.23
VMP1-206ENST00000587945 PDE10AQ9Y233 779 aa13.6□□□□□ -0.23
VMP1-206ENST00000587945 GOLGA6L10A0A0M3HER8 536 aa13.59□□□□□ -0.23
VMP1-206ENST00000587945 FEZF1A0PJY2 475 aa13.59□□□□□ -0.23
VMP1-206ENST00000587945 OR2W5A6NFC9 320 aa13.59□□□□□ -0.23
VMP1-206ENST00000587945 TXNDC9O14530 226 aa13.59□□□□□ -0.23
VMP1-206ENST00000587945 SERPINA7P05543 415 aa13.59□□□□□ -0.23
VMP1-206ENST00000587945 ITGAMP11215 1152 aa13.59□□□□□ -0.23
VMP1-206ENST00000587945 SOX11P35716 441 aa13.59□□□□□ -0.23
VMP1-206ENST00000587945 CSNK1G2P78368 415 aa13.59□□□□□ -0.23
VMP1-206ENST00000587945 ARG2P78540 354 aa13.59□□□□□ -0.23
VMP1-206ENST00000587945 NAE1Q13564 534 aa13.59□□□□□ -0.23
VMP1-206ENST00000587945 FAM53BQ14153 422 aa13.59□□□□□ -0.23
VMP1-206ENST00000587945 PCOLCEQ15113 449 aa13.59□□□□□ -0.23
VMP1-206ENST00000587945 NDUFA9Q16795 377 aa13.59□□□□□ -0.23
VMP1-206ENST00000587945 BBS9Q3SYG4 887 aa13.59□□□□□ -0.23
VMP1-206ENST00000587945 HP1BP3Q5SSJ5 553 aaPredicted RBP13.59□□□□□ -0.23
VMP1-206ENST00000587945 AGTRAPQ6RW13 159 aa13.59□□□□□ -0.23
VMP1-206ENST00000587945 MCOLN3Q8TDD5 553 aa13.59□□□□□ -0.23
VMP1-206ENST00000587945 FAR1Q8WVX9 515 aa13.59□□□□□ -0.23
VMP1-206ENST00000587945 MAGEB10Q96LZ2 347 aaPredicted RBP13.59□□□□□ -0.23
VMP1-206ENST00000587945 CCDC138Q96M89 665 aa13.59□□□□□ -0.23
VMP1-206ENST00000587945 PWWP2AQ96N64 755 aa13.59□□□□□ -0.23
VMP1-206ENST00000587945 PLAC1Q9HBJ0 212 aa13.59□□□□□ -0.23
VMP1-206ENST00000587945 TRMT1Q9NXH9 659 aaKnown RBP13.59□□□□□ -0.23
VMP1-206ENST00000587945 HCN3Q9P1Z3 774 aa13.59□□□□□ -0.23
VMP1-206ENST00000587945 SNX12Q9UMY4 172 aa13.59□□□□□ -0.23
VMP1-206ENST00000587945 OSGIN2Q9Y236 505 aa13.59□□□□□ -0.23
VMP1-206ENST00000587945 ANKRD12Q6UB98 2062 aa13.59□□□□□ -0.23
VMP1-206ENST00000587945 NOTCH2Q04721 2471 aa13.58□□□□□ -0.23
VMP1-206ENST00000587945 LOC102723996A0A087X1L8 192 aa13.58□□□□□ -0.24
VMP1-206ENST00000587945 IGHV3-20A0A0C4DH32 117 aa13.58□□□□□ -0.24
VMP1-206ENST00000587945 A0A1W2PQ72 361 aa13.58□□□□□ -0.24
VMP1-206ENST00000587945 SGK494L7N484 410 aa13.58□□□□□ -0.24
VMP1-206ENST00000587945 EIF3FO00303 357 aaPredicted RBP13.58□□□□□ -0.24
VMP1-206ENST00000587945 DNALI1O14645 258 aaPredicted RBP13.58□□□□□ -0.24
VMP1-206ENST00000587945 LCMT2O60294 686 aaKnown RBP13.58□□□□□ -0.24
VMP1-206ENST00000587945 WFS1O76024 890 aa13.58□□□□□ -0.24
VMP1-206ENST00000587945 BMP10O95393 424 aa13.58□□□□□ -0.24
VMP1-206ENST00000587945 AHSGP02765 367 aa13.58□□□□□ -0.24
VMP1-206ENST00000587945 UQCRHP07919 91 aa13.58□□□□□ -0.24
VMP1-206ENST00000587945 IL1RNP18510 177 aa13.58□□□□□ -0.24
VMP1-206ENST00000587945 BCL6P41182 706 aa13.58□□□□□ -0.24
VMP1-206ENST00000587945 AVPR1BP47901 424 aa13.58□□□□□ -0.24
VMP1-206ENST00000587945 RGS4P49798 205 aa13.58□□□□□ -0.24
VMP1-206ENST00000587945 RPS15AP62244 130 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms