RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 PRAMEF13Q5VWM6 474 aa15.35■□□□□ 0.05
CSNK1D-223ENST00000584472 LIPMQ5VYY2 423 aa15.35■□□□□ 0.05
CSNK1D-223ENST00000584472 METTL2BQ6P1Q9 378 aaKnown RBP15.35■□□□□ 0.05
CSNK1D-223ENST00000584472 LCTLQ6UWM7 567 aa15.35■□□□□ 0.05
CSNK1D-223ENST00000584472 LRRC70Q7Z2Q7 622 aa15.35■□□□□ 0.05
CSNK1D-223ENST00000584472 OR8K5Q8NH50 307 aa15.35■□□□□ 0.05
CSNK1D-223ENST00000584472 MGARPQ8TDB4 240 aa15.35■□□□□ 0.05
CSNK1D-223ENST00000584472 L3HYPDHQ96EM0 354 aa15.35■□□□□ 0.05
CSNK1D-223ENST00000584472 PPM1MQ96MI6 270 aa15.35■□□□□ 0.05
CSNK1D-223ENST00000584472 FCRL4Q96PJ5 515 aa15.35■□□□□ 0.05
CSNK1D-223ENST00000584472 TRAPPC9Q96Q05 1148 aa15.35■□□□□ 0.05
CSNK1D-223ENST00000584472 TMEM237Q96Q45 408 aa15.35■□□□□ 0.05
CSNK1D-223ENST00000584472 MIPEPQ99797 713 aa15.35■□□□□ 0.05
CSNK1D-223ENST00000584472 CTRCQ99895 268 aa15.35■□□□□ 0.05
CSNK1D-223ENST00000584472 ERVK-6Q9BXR3 956 aa15.35■□□□□ 0.05
CSNK1D-223ENST00000584472 PCBD2Q9H0N5 130 aa15.35■□□□□ 0.05
CSNK1D-223ENST00000584472 APMAPQ9HDC9 416 aa15.35■□□□□ 0.05
CSNK1D-223ENST00000584472 PDE7BQ9NP56 450 aa15.35■□□□□ 0.05
CSNK1D-223ENST00000584472 FGF21Q9NSA1 209 aa15.35■□□□□ 0.05
CSNK1D-223ENST00000584472 ABCF3Q9NUQ8 709 aa15.35■□□□□ 0.05
CSNK1D-223ENST00000584472 SOHLH2Q9NX45 425 aa15.35■□□□□ 0.05
CSNK1D-223ENST00000584472 OPTCQ9UBM4 332 aa15.35■□□□□ 0.05
CSNK1D-223ENST00000584472 TAC3Q9UHF0 121 aa15.35■□□□□ 0.05
CSNK1D-223ENST00000584472 CFAP46Q8IYW2 2715 aa15.34■□□□□ 0.05
CSNK1D-223ENST00000584472 A0A0J9YY10 115 aa15.34■□□□□ 0.05
CSNK1D-223ENST00000584472 EIF4E1BA6NMX2 242 aaKnown RBP15.34■□□□□ 0.05
CSNK1D-223ENST00000584472 K7ENP7 123 aa15.34■□□□□ 0.05
CSNK1D-223ENST00000584472 E2F3O00716 465 aa15.34■□□□□ 0.05
CSNK1D-223ENST00000584472 BIRC5O15392 142 aa15.34■□□□□ 0.05
CSNK1D-223ENST00000584472 TRIM13O60858 407 aa15.34■□□□□ 0.05
CSNK1D-223ENST00000584472 EBLN1P0CF75 366 aa15.34■□□□□ 0.05
CSNK1D-223ENST00000584472 FOLR1P15328 257 aa15.34■□□□□ 0.05
CSNK1D-223ENST00000584472 ST6GAL1P15907 406 aa15.34■□□□□ 0.05
CSNK1D-223ENST00000584472 NPPBP16860 134 aa15.34■□□□□ 0.05
CSNK1D-223ENST00000584472 CXADRP78310 365 aa15.34■□□□□ 0.05
CSNK1D-223ENST00000584472 SF1Q15637 639 aaKnown RBP15.34■□□□□ 0.05
CSNK1D-223ENST00000584472 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.34■□□□□ 0.05
CSNK1D-223ENST00000584472 UNC50Q53HI1 259 aa15.34■□□□□ 0.05
CSNK1D-223ENST00000584472 HHATQ5VTY9 493 aa15.34■□□□□ 0.05
CSNK1D-223ENST00000584472 INO80CQ6PI98 192 aaPredicted RBP15.34■□□□□ 0.05
CSNK1D-223ENST00000584472 TCTN2Q96GX1 697 aa15.34■□□□□ 0.05
CSNK1D-223ENST00000584472 PAIP2Q9BPZ3 127 aaKnown RBP15.34■□□□□ 0.05
CSNK1D-223ENST00000584472 HAUS8Q9BT25 410 aa15.34■□□□□ 0.05
CSNK1D-223ENST00000584472 ACAT2Q9BWD1 397 aa15.34■□□□□ 0.05
CSNK1D-223ENST00000584472 DNAJC11Q9NVH1 559 aa15.34■□□□□ 0.05
CSNK1D-223ENST00000584472 PCTPQ9UKL6 214 aa15.34■□□□□ 0.05
CSNK1D-223ENST00000584472 WDR91A4D1P6 747 aa15.33■□□□□ 0.04
CSNK1D-223ENST00000584472 CHN1P15882 459 aa15.33■□□□□ 0.04
CSNK1D-223ENST00000584472 EPORP19235 508 aa15.33■□□□□ 0.04
CSNK1D-223ENST00000584472 NAGLUP54802 743 aa15.33■□□□□ 0.04
CSNK1D-223ENST00000584472 YBX1P67809 324 aaKnown RBP15.33■□□□□ 0.04
CSNK1D-223ENST00000584472 PRDX1Q06830 199 aaKnown RBP15.33■□□□□ 0.04
CSNK1D-223ENST00000584472 CDC16Q13042 620 aa15.33■□□□□ 0.04
CSNK1D-223ENST00000584472 CLN3Q13286 438 aa15.33■□□□□ 0.04
CSNK1D-223ENST00000584472 KCNAB1Q14722 419 aa15.33■□□□□ 0.04
CSNK1D-223ENST00000584472 ICE2Q659A1 982 aa15.33■□□□□ 0.04
CSNK1D-223ENST00000584472 TRIM73Q86UV7 250 aa15.33■□□□□ 0.04
CSNK1D-223ENST00000584472 ZFAND4Q86XD8 727 aa15.33■□□□□ 0.04
CSNK1D-223ENST00000584472 PPP1R3BQ86XI6 285 aa15.33■□□□□ 0.04
CSNK1D-223ENST00000584472 DTX1Q86Y01 620 aa15.33■□□□□ 0.04
CSNK1D-223ENST00000584472 NUDCD3Q8IVD9 361 aa15.33■□□□□ 0.04
CSNK1D-223ENST00000584472 TEX9Q8N6V9 391 aa15.33■□□□□ 0.04
CSNK1D-223ENST00000584472 C19orf47Q8N9M1 422 aaKnown RBP15.33■□□□□ 0.04
CSNK1D-223ENST00000584472 OR2L3Q8NG85 312 aa15.33■□□□□ 0.04
CSNK1D-223ENST00000584472 ZNF483Q8TF39 744 aaPredicted RBP15.33■□□□□ 0.04
CSNK1D-223ENST00000584472 SLC39A7Q92504 469 aa15.33■□□□□ 0.04
CSNK1D-223ENST00000584472 MOCOSQ96EN8 888 aa15.33■□□□□ 0.04
CSNK1D-223ENST00000584472 SPRY4Q9C004 299 aa15.33■□□□□ 0.04
CSNK1D-223ENST00000584472 FANCEQ9HB96 536 aa15.33■□□□□ 0.04
CSNK1D-223ENST00000584472 ACSS2Q9NR19 701 aa15.33■□□□□ 0.04
CSNK1D-223ENST00000584472 RARRES3Q9UL19 164 aa15.33■□□□□ 0.04
CSNK1D-223ENST00000584472 TMEM184BQ9Y519 407 aaPredicted RBP15.33■□□□□ 0.04
CSNK1D-223ENST00000584472 SUPT7LO94864 414 aa15.32■□□□□ 0.04
CSNK1D-223ENST00000584472 CCNDBP1O95273 360 aa15.32■□□□□ 0.04
CSNK1D-223ENST00000584472 PVRP15151 417 aa15.32■□□□□ 0.04
CSNK1D-223ENST00000584472 EPB42P16452 691 aa15.32■□□□□ 0.04
CSNK1D-223ENST00000584472 CMPK1P30085 196 aa15.32■□□□□ 0.04
CSNK1D-223ENST00000584472 PIK3CGP48736 1102 aa15.32■□□□□ 0.04
CSNK1D-223ENST00000584472 ABATP80404 500 aa15.32■□□□□ 0.04
CSNK1D-223ENST00000584472 ASPHQ12797 758 aa15.32■□□□□ 0.04
CSNK1D-223ENST00000584472 GTF2H2Q13888 395 aa15.32■□□□□ 0.04
CSNK1D-223ENST00000584472 COL9A2Q14055 689 aaPredicted RBP15.32■□□□□ 0.04
CSNK1D-223ENST00000584472 PDK4Q16654 411 aa15.32■□□□□ 0.04
CSNK1D-223ENST00000584472 KIAA1614Q5VZ46 1190 aa15.32■□□□□ 0.04
CSNK1D-223ENST00000584472 GTF2H2CQ6P1K8 395 aa15.32■□□□□ 0.04
CSNK1D-223ENST00000584472 RPS27LQ71UM5 84 aaKnown RBP15.32■□□□□ 0.04
CSNK1D-223ENST00000584472 GOLGA7Q7Z5G4 137 aa15.32■□□□□ 0.04
CSNK1D-223ENST00000584472 C17orf64Q86WR6 236 aa15.32■□□□□ 0.04
CSNK1D-223ENST00000584472 FAM20CQ8IXL6 584 aa15.32■□□□□ 0.04
CSNK1D-223ENST00000584472 ARFGAP2Q8N6H7 521 aa15.32■□□□□ 0.04
CSNK1D-223ENST00000584472 SNX31Q8N9S9 440 aa15.32■□□□□ 0.04
CSNK1D-223ENST00000584472 OR6Y1Q8NGX8 325 aa15.32■□□□□ 0.04
CSNK1D-223ENST00000584472 SREK1Q8WXA9 508 aaKnown RBP15.32■□□□□ 0.04
CSNK1D-223ENST00000584472 NEIL2Q969S2 332 aa15.32■□□□□ 0.04
CSNK1D-223ENST00000584472 NAF1Q96HR8 494 aaKnown RBP15.32■□□□□ 0.04
CSNK1D-223ENST00000584472 NSUN5Q96P11 429 aaKnown RBP15.32■□□□□ 0.04
CSNK1D-223ENST00000584472 CCNL2Q96S94 520 aaPredicted RBP15.32■□□□□ 0.04
CSNK1D-223ENST00000584472 GATA5Q9BWX5 397 aaPredicted RBP15.32■□□□□ 0.04
CSNK1D-223ENST00000584472 ULBP3Q9BZM4 244 aa15.32■□□□□ 0.04
CSNK1D-223ENST00000584472 GSTO2Q9H4Y5 243 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms