RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 AIMP2Q13155 320 aaKnown RBP20.4■□□□□ 0.86
PPP4R1-228ENST00000584074 CBLBQ13191 982 aa20.4■□□□□ 0.86
PPP4R1-228ENST00000584074 GARNL3Q5VVW2 1013 aa20.4■□□□□ 0.86
PPP4R1-228ENST00000584074 SLC6A19Q695T7 634 aa20.4■□□□□ 0.86
PPP4R1-228ENST00000584074 TMEM207Q6UWW9 146 aa20.4■□□□□ 0.86
PPP4R1-228ENST00000584074 CAPN12Q6ZSI9 719 aa20.4■□□□□ 0.86
PPP4R1-228ENST00000584074 VN1R4Q7Z5H5 301 aa20.4■□□□□ 0.86
PPP4R1-228ENST00000584074 LAPTM4BQ86VI4 370 aa20.4■□□□□ 0.86
PPP4R1-228ENST00000584074 ZC3HC1Q86WB0 502 aaKnown RBP20.4■□□□□ 0.86
PPP4R1-228ENST00000584074 C17orf64Q86WR6 236 aa20.4■□□□□ 0.86
PPP4R1-228ENST00000584074 HPS6Q86YV9 775 aa20.4■□□□□ 0.86
PPP4R1-228ENST00000584074 AMER3Q8N944 861 aa20.4■□□□□ 0.86
PPP4R1-228ENST00000584074 BBOF1Q8ND07 529 aa20.4■□□□□ 0.86
PPP4R1-228ENST00000584074 MVB12AQ96EY5 273 aa20.4■□□□□ 0.86
PPP4R1-228ENST00000584074 MMABQ96EY8 250 aaPredicted RBP20.4■□□□□ 0.86
PPP4R1-228ENST00000584074 YIPF2Q9BWQ6 316 aa20.4■□□□□ 0.86
PPP4R1-228ENST00000584074 DRC3Q9H069 523 aa20.4■□□□□ 0.86
PPP4R1-228ENST00000584074 C5AR2Q9P296 337 aa20.4■□□□□ 0.86
PPP4R1-228ENST00000584074 C3orf18Q9UK00 162 aa20.4■□□□□ 0.86
PPP4R1-228ENST00000584074 MRPS2Q9Y399 296 aaKnown RBP20.4■□□□□ 0.86
PPP4R1-228ENST00000584074 PRRC2CQ9Y520 2896 aaKnown RBP20.39■□□□□ 0.85
PPP4R1-228ENST00000584074 A0A0A6YYC8 382 aaPredicted RBP20.39■□□□□ 0.85
PPP4R1-228ENST00000584074 I3L1I5 382 aaPredicted RBP20.39■□□□□ 0.85
PPP4R1-228ENST00000584074 TXNDC9O14530 226 aa20.39■□□□□ 0.85
PPP4R1-228ENST00000584074 NDC80O14777 642 aa20.39■□□□□ 0.85
PPP4R1-228ENST00000584074 ALPPP05187 535 aa20.39■□□□□ 0.85
PPP4R1-228ENST00000584074 NPPBP16860 134 aa20.39■□□□□ 0.85
PPP4R1-228ENST00000584074 SLC26A3P40879 764 aa20.39■□□□□ 0.85
PPP4R1-228ENST00000584074 RPS15AP62244 130 aaKnown RBP20.39■□□□□ 0.85
PPP4R1-228ENST00000584074 ZNF460Q14592 562 aa20.39■□□□□ 0.85
PPP4R1-228ENST00000584074 SYT10Q6XYQ8 523 aa20.39■□□□□ 0.85
PPP4R1-228ENST00000584074 MAATS1Q7Z4T9 603 aa20.39■□□□□ 0.85
PPP4R1-228ENST00000584074 Q8NA96 180 aa20.39■□□□□ 0.85
PPP4R1-228ENST00000584074 OR11G2Q8NGC1 345 aa20.39■□□□□ 0.85
PPP4R1-228ENST00000584074 CPT1CQ8TCG5 803 aa20.39■□□□□ 0.85
PPP4R1-228ENST00000584074 PYCR2Q96C36 320 aa20.39■□□□□ 0.85
PPP4R1-228ENST00000584074 PDLIM5Q96HC4 596 aaKnown RBP20.39■□□□□ 0.85
PPP4R1-228ENST00000584074 MACROD1Q9BQ69 325 aa20.39■□□□□ 0.85
PPP4R1-228ENST00000584074 ZBTB20Q9HC78 741 aaPredicted RBP20.39■□□□□ 0.85
PPP4R1-228ENST00000584074 WHRNQ9P202 907 aa20.39■□□□□ 0.85
PPP4R1-228ENST00000584074 KCNE1BA0A087WTH5 132 aa20.38■□□□□ 0.85
PPP4R1-228ENST00000584074 FAM95CA0A1B0GW59 222 aa20.38■□□□□ 0.85
PPP4R1-228ENST00000584074 FEZF1A0PJY2 475 aa20.38■□□□□ 0.85
PPP4R1-228ENST00000584074 PABPN1LA6NDY0 278 aaKnown RBP20.38■□□□□ 0.85
PPP4R1-228ENST00000584074 PRPF4O43172 522 aaKnown RBP eCLIP20.38■□□□□ 0.851e-6■■■□□ 18.5
PPP4R1-228ENST00000584074 GUCA1CO95843 209 aa20.38■□□□□ 0.85
PPP4R1-228ENST00000584074 CDH1P12830 882 aa20.38■□□□□ 0.85
PPP4R1-228ENST00000584074 CCND1P24385 295 aa20.38■□□□□ 0.85
PPP4R1-228ENST00000584074 ITGA3P26006 1051 aa20.38■□□□□ 0.85
PPP4R1-228ENST00000584074 AP1S2P56377 157 aa20.38■□□□□ 0.85
PPP4R1-228ENST00000584074 CALCOCO2Q13137 446 aa20.38■□□□□ 0.85
PPP4R1-228ENST00000584074 SYT16Q17RD7 645 aa20.38■□□□□ 0.85
PPP4R1-228ENST00000584074 TUBB8Q3ZCM7 444 aa20.38■□□□□ 0.85
PPP4R1-228ENST00000584074 CAPN13Q6MZZ7 669 aaPredicted RBP20.38■□□□□ 0.85
PPP4R1-228ENST00000584074 LCTLQ6UWM7 567 aa20.38■□□□□ 0.85
PPP4R1-228ENST00000584074 SLC26A11Q86WA9 606 aa20.38■□□□□ 0.85
PPP4R1-228ENST00000584074 PYROXD1Q8WU10 500 aa20.38■□□□□ 0.85
PPP4R1-228ENST00000584074 C8orf44Q96CB5 159 aa20.38■□□□□ 0.85
PPP4R1-228ENST00000584074 TRIM54Q9BYV2 358 aa20.38■□□□□ 0.85
PPP4R1-228ENST00000584074 SMYD2Q9NRG4 433 aa20.38■□□□□ 0.85
PPP4R1-228ENST00000584074 GRHL1Q9NZI5 618 aa20.38■□□□□ 0.85
PPP4R1-228ENST00000584074 PCM1Q15154 2024 aa20.37■□□□□ 0.85
PPP4R1-228ENST00000584074 LCMT2O60294 686 aaKnown RBP20.37■□□□□ 0.85
PPP4R1-228ENST00000584074 ANXA5P08758 320 aa20.37■□□□□ 0.85
PPP4R1-228ENST00000584074 ZNF37AP17032 561 aaPredicted RBP20.37■□□□□ 0.85
PPP4R1-228ENST00000584074 BCL6P41182 706 aa20.37■□□□□ 0.85
PPP4R1-228ENST00000584074 TAS2R39P59534 338 aa20.37■□□□□ 0.85
PPP4R1-228ENST00000584074 MAT1AQ00266 395 aaKnown RBP20.37■□□□□ 0.85
PPP4R1-228ENST00000584074 FAM53BQ14153 422 aa20.37■□□□□ 0.85
PPP4R1-228ENST00000584074 PRR30Q53SZ7 412 aaPredicted RBP20.37■□□□□ 0.85
PPP4R1-228ENST00000584074 DUPD1Q68J44 220 aa20.37■□□□□ 0.85
PPP4R1-228ENST00000584074 SBSNQ6UWP8 590 aa20.37■□□□□ 0.85
PPP4R1-228ENST00000584074 ATCAYQ86WG3 371 aa20.37■□□□□ 0.85
PPP4R1-228ENST00000584074 PARP9Q8IXQ6 854 aa20.37■□□□□ 0.85
PPP4R1-228ENST00000584074 OR9A4Q8NGU2 314 aa20.37■□□□□ 0.85
PPP4R1-228ENST00000584074 OR56A3Q8NH54 315 aa20.37■□□□□ 0.85
PPP4R1-228ENST00000584074 PNPLA2Q96AD5 504 aa20.37■□□□□ 0.85
PPP4R1-228ENST00000584074 FBXL8Q96CD0 374 aa20.37■□□□□ 0.85
PPP4R1-228ENST00000584074 OR4K3Q96R72 315 aa20.37■□□□□ 0.85
PPP4R1-228ENST00000584074 SAYSD1Q9NPB0 183 aa20.37■□□□□ 0.85
PPP4R1-228ENST00000584074 SLAMF7Q9NQ25 335 aa20.37■□□□□ 0.85
PPP4R1-228ENST00000584074 MAP4K5Q9Y4K4 846 aa20.37■□□□□ 0.85
PPP4R1-228ENST00000584074 IDSB3KWA1 339 aa20.36■□□□□ 0.85
PPP4R1-228ENST00000584074 CDC7O00311 574 aa20.36■□□□□ 0.85
PPP4R1-228ENST00000584074 KLHL41O60662 606 aa20.36■□□□□ 0.85
PPP4R1-228ENST00000584074 IPO13O94829 963 aaKnown RBP20.36■□□□□ 0.85
PPP4R1-228ENST00000584074 ENO2P09104 434 aaPredicted RBP20.36■□□□□ 0.85
PPP4R1-228ENST00000584074 ACPPP15309 386 aa20.36■□□□□ 0.85
PPP4R1-228ENST00000584074 SSTR1P30872 391 aa20.36■□□□□ 0.85
PPP4R1-228ENST00000584074 EMP2P54851 167 aa20.36■□□□□ 0.85
PPP4R1-228ENST00000584074 Q0VFX4 171 aa20.36■□□□□ 0.85
PPP4R1-228ENST00000584074 NDUFA9Q16795 377 aa20.36■□□□□ 0.85
PPP4R1-228ENST00000584074 PPP1R3AQ16821 1122 aa20.36■□□□□ 0.85
PPP4R1-228ENST00000584074 PLEKHN1Q494U1 663 aaPredicted RBP20.36■□□□□ 0.85
PPP4R1-228ENST00000584074 ATG9BQ674R7 924 aa20.36■□□□□ 0.85
PPP4R1-228ENST00000584074 IGFL3Q6UXB1 125 aa20.36■□□□□ 0.85
PPP4R1-228ENST00000584074 PRSS41Q7RTY9 318 aa20.36■□□□□ 0.85
PPP4R1-228ENST00000584074 CEP97Q8IW35 865 aa20.36■□□□□ 0.85
PPP4R1-228ENST00000584074 EFCAB3Q8N7B9 438 aa20.36■□□□□ 0.85
PPP4R1-228ENST00000584074 THAP11Q96EK4 314 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms