RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 NCOA7Q8NI08 942 aa4.17□□□□□ -1.74
SMCHD1-205ENST00000581383 FIBINQ8TAL6 211 aa4.17□□□□□ -1.74
SMCHD1-205ENST00000581383 SLC26A7Q8TE54 656 aa4.17□□□□□ -1.74
SMCHD1-205ENST00000581383 METTL21AQ8WXB1 218 aa4.17□□□□□ -1.74
SMCHD1-205ENST00000581383 SUSD6Q92537 303 aa4.17□□□□□ -1.74
SMCHD1-205ENST00000581383 ZNF501Q96CX3 271 aaPredicted RBP4.17□□□□□ -1.74
SMCHD1-205ENST00000581383 SGF29Q96ES7 293 aa4.17□□□□□ -1.74
SMCHD1-205ENST00000581383 PRAC1Q96KF2 57 aa4.17□□□□□ -1.74
SMCHD1-205ENST00000581383 KLHL5Q96PQ7 755 aa4.17□□□□□ -1.74
SMCHD1-205ENST00000581383 DUX3Q96PT4 197 aa4.17□□□□□ -1.74
SMCHD1-205ENST00000581383 PIGQQ9BRB3 760 aa4.17□□□□□ -1.74
SMCHD1-205ENST00000581383 LSG1Q9H089 658 aaKnown RBP4.17□□□□□ -1.74
SMCHD1-205ENST00000581383 C2orf40Q9H1Z8 148 aa4.17□□□□□ -1.74
SMCHD1-205ENST00000581383 ATP13A3Q9H7F0 1226 aa4.17□□□□□ -1.74
SMCHD1-205ENST00000581383 RNF121Q9H920 327 aa4.17□□□□□ -1.74
SMCHD1-205ENST00000581383 GMEB2Q9UKD1 530 aa4.17□□□□□ -1.74
SMCHD1-205ENST00000581383 GRID1Q9ULK0 1009 aa4.17□□□□□ -1.74
SMCHD1-205ENST00000581383 PPP2R2CQ9Y2T4 447 aa4.17□□□□□ -1.74
SMCHD1-205ENST00000581383 ARID2Q68CP9 1835 aa4.16□□□□□ -1.74
SMCHD1-205ENST00000581383 KLF11O14901 512 aa4.16□□□□□ -1.74
SMCHD1-205ENST00000581383 CTDSPLO15194 276 aa4.16□□□□□ -1.74
SMCHD1-205ENST00000581383 HMBSP08397 361 aa4.16□□□□□ -1.74
SMCHD1-205ENST00000581383 CCND3P30281 292 aaPredicted RBP4.16□□□□□ -1.74
SMCHD1-205ENST00000581383 DUTP33316 252 aaKnown RBP4.16□□□□□ -1.74
SMCHD1-205ENST00000581383 COPB2P35606 906 aa4.16□□□□□ -1.74
SMCHD1-205ENST00000581383 CDKN1AP38936 164 aa4.16□□□□□ -1.74
SMCHD1-205ENST00000581383 DNA2P51530 1060 aa4.16□□□□□ -1.74
SMCHD1-205ENST00000581383 EXT1Q16394 746 aa4.16□□□□□ -1.74
SMCHD1-205ENST00000581383 TYSND1Q2T9J0 566 aa4.16□□□□□ -1.74
SMCHD1-205ENST00000581383 FAM46CQ5VWP2 391 aa4.16□□□□□ -1.74
SMCHD1-205ENST00000581383 PRSS55Q6UWB4 352 aaPredicted RBP4.16□□□□□ -1.74
SMCHD1-205ENST00000581383 LINC00696Q6ZRV3 163 aa4.16□□□□□ -1.74
SMCHD1-205ENST00000581383 CCDC91Q7Z6B0 441 aa4.16□□□□□ -1.74
SMCHD1-205ENST00000581383 CREBRFQ8IUR6 639 aa4.16□□□□□ -1.74
SMCHD1-205ENST00000581383 NUP93Q8N1F7 819 aa4.16□□□□□ -1.74
SMCHD1-205ENST00000581383 LRTM2Q8N967 370 aa4.16□□□□□ -1.74
SMCHD1-205ENST00000581383 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.16□□□□□ -1.74
SMCHD1-205ENST00000581383 TMEM178AQ8NBL3 297 aa4.16□□□□□ -1.74
SMCHD1-205ENST00000581383 SLC37A3Q8NCC5 494 aa4.16□□□□□ -1.74
SMCHD1-205ENST00000581383 OR7G3Q8NG95 312 aa4.16□□□□□ -1.74
SMCHD1-205ENST00000581383 AFAP1L1Q8TED9 768 aa4.16□□□□□ -1.74
SMCHD1-205ENST00000581383 PIK3R3Q92569 461 aa4.16□□□□□ -1.74
SMCHD1-205ENST00000581383 HNRNPABQ99729 332 aaKnown RBP4.16□□□□□ -1.74
SMCHD1-205ENST00000581383 FSD1Q9BTV5 496 aa4.16□□□□□ -1.74
SMCHD1-205ENST00000581383 FUT8Q9BYC5 575 aa4.16□□□□□ -1.74
SMCHD1-205ENST00000581383 DNAI2Q9GZS0 605 aa4.16□□□□□ -1.74
SMCHD1-205ENST00000581383 TUFT1Q9NNX1 390 aa4.16□□□□□ -1.74
SMCHD1-205ENST00000581383 SCRT2Q9NQ03 307 aa4.16□□□□□ -1.74
SMCHD1-205ENST00000581383 ZNF71Q9NQZ8 489 aaPredicted RBP4.16□□□□□ -1.74
SMCHD1-205ENST00000581383 OR6C2Q9NZP2 312 aa4.16□□□□□ -1.74
SMCHD1-205ENST00000581383 MAN1B1Q9UKM7 699 aa4.16□□□□□ -1.74
SMCHD1-205ENST00000581383 HBS1LQ9Y450 684 aaKnown RBP4.16□□□□□ -1.74
SMCHD1-205ENST00000581383 KIF26BQ2KJY2 2108 aa4.15□□□□□ -1.74
SMCHD1-205ENST00000581383 TRBV5-5A0A0J9YX44 114 aa4.15□□□□□ -1.75
SMCHD1-205ENST00000581383 MSGN1A6NI15 193 aa4.15□□□□□ -1.75
SMCHD1-205ENST00000581383 TMEM150CB9EJG8 249 aa4.15□□□□□ -1.75
SMCHD1-205ENST00000581383 MOCS2O96007 188 aaPredicted RBP4.15□□□□□ -1.75
SMCHD1-205ENST00000581383 ATP1B1P05026 303 aa4.15□□□□□ -1.75
SMCHD1-205ENST00000581383 CEACAM1P13688 526 aa4.15□□□□□ -1.75
SMCHD1-205ENST00000581383 ITIH1P19827 911 aa4.15□□□□□ -1.75
SMCHD1-205ENST00000581383 MYL7Q01449 175 aa4.15□□□□□ -1.75
SMCHD1-205ENST00000581383 IL10RBQ08334 325 aa4.15□□□□□ -1.75
SMCHD1-205ENST00000581383 ZNF876PQ49A33 203 aa4.15□□□□□ -1.75
SMCHD1-205ENST00000581383 IYDQ6PHW0 289 aa4.15□□□□□ -1.75
SMCHD1-205ENST00000581383 KLHDC8BQ8IXV7 354 aa4.15□□□□□ -1.75
SMCHD1-205ENST00000581383 RCOR2Q8IZ40 523 aa4.15□□□□□ -1.75
SMCHD1-205ENST00000581383 MARVELD2Q8N4S9 558 aa4.15□□□□□ -1.75
SMCHD1-205ENST00000581383 NIPA2Q8N8Q9 360 aa4.15□□□□□ -1.75
SMCHD1-205ENST00000581383 GPRC5AQ8NFJ5 357 aa4.15□□□□□ -1.75
SMCHD1-205ENST00000581383 GRK7Q8WTQ7 553 aa4.15□□□□□ -1.75
SMCHD1-205ENST00000581383 UBLCP1Q8WVY7 318 aaPredicted RBP4.15□□□□□ -1.75
SMCHD1-205ENST00000581383 DYRK2Q92630 601 aa4.15□□□□□ -1.75
SMCHD1-205ENST00000581383 C10orf90Q96M02 699 aa4.15□□□□□ -1.75
SMCHD1-205ENST00000581383 F2RL3Q96RI0 385 aa4.15□□□□□ -1.75
SMCHD1-205ENST00000581383 THAP2Q9H0W7 228 aa4.15□□□□□ -1.75
SMCHD1-205ENST00000581383 ABCB8Q9NUT2 735 aa4.15□□□□□ -1.75
SMCHD1-205ENST00000581383 CWC25Q9NXE8 425 aaPredicted RBP4.15□□□□□ -1.75
SMCHD1-205ENST00000581383 EPHA6Q9UF33 1036 aa4.15□□□□□ -1.75
SMCHD1-205ENST00000581383 KLK4Q9Y5K2 254 aa4.15□□□□□ -1.75
SMCHD1-205ENST00000581383 IL16Q14005 1332 aa4.15□□□□□ -1.75
SMCHD1-205ENST00000581383 IGHV4-4A0A075B6R2 117 aa4.14□□□□□ -1.75
SMCHD1-205ENST00000581383 TRAV18A0A075B6X5 111 aa4.14□□□□□ -1.75
SMCHD1-205ENST00000581383 C2CD4DB7Z1M9 353 aa4.14□□□□□ -1.75
SMCHD1-205ENST00000581383 HHLA1C9JL84 531 aa4.14□□□□□ -1.75
SMCHD1-205ENST00000581383 KBTBD13C9JR72 458 aa4.14□□□□□ -1.75
SMCHD1-205ENST00000581383 FMO6PO60774 539 aa4.14□□□□□ -1.75
SMCHD1-205ENST00000581383 NME6O75414 186 aaPredicted RBP4.14□□□□□ -1.75
SMCHD1-205ENST00000581383 AP2A2O94973 939 aa4.14□□□□□ -1.75
SMCHD1-205ENST00000581383 RAF1P04049 648 aa4.14□□□□□ -1.75
SMCHD1-205ENST00000581383 SP9P0CG40 484 aa4.14□□□□□ -1.75
SMCHD1-205ENST00000581383 DLATP10515 647 aaKnown RBP4.14□□□□□ -1.75
SMCHD1-205ENST00000581383 GNB3P16520 340 aa4.14□□□□□ -1.75
SMCHD1-205ENST00000581383 OAS2P29728 719 aaKnown RBP4.14□□□□□ -1.75
SMCHD1-205ENST00000581383 NPBWR1P48145 328 aa4.14□□□□□ -1.75
SMCHD1-205ENST00000581383 ERVK11-1P61568 191 aa4.14□□□□□ -1.75
SMCHD1-205ENST00000581383 ST8SIA6P61647 398 aa4.14□□□□□ -1.75
SMCHD1-205ENST00000581383 ZNF674Q2M3X9 581 aa4.14□□□□□ -1.75
SMCHD1-205ENST00000581383 IQCCQ4KMZ1 466 aa4.14□□□□□ -1.75
SMCHD1-205ENST00000581383 PODNL1Q6PEZ8 512 aa4.14□□□□□ -1.75
SMCHD1-205ENST00000581383 ZNF790Q6PG37 636 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms