RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, human

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KPNB1-209	ENST00000580158	ISM1	B1AKI9	464 aa		5.62	□□□□□ -1.51
KPNB1-209	ENST00000580158	PRPF4	O43172	522 aa	Known RBP eCLIP	5.62	□□□□□ -1.51
KPNB1-209	ENST00000580158	WDR1	O75083	606 aa		5.62	□□□□□ -1.51
KPNB1-209	ENST00000580158	NEURL1	O76050	574 aa		5.62	□□□□□ -1.51
KPNB1-209	ENST00000580158	MSH3	P20585	1137 aa		5.62	□□□□□ -1.51
KPNB1-209	ENST00000580158	FBL	P22087	321 aa	Known RBP	5.62	□□□□□ -1.51
KPNB1-209	ENST00000580158	MMP8	P22894	467 aa		5.62	□□□□□ -1.51
KPNB1-209	ENST00000580158	CMA1	P23946	247 aa		5.62	□□□□□ -1.51
KPNB1-209	ENST00000580158	HSD3B2	P26439	372 aa		5.62	□□□□□ -1.51
KPNB1-209	ENST00000580158	CFP	P27918	469 aa		5.62	□□□□□ -1.51
KPNB1-209	ENST00000580158	SHMT2	P34897	504 aa		5.62	□□□□□ -1.51
KPNB1-209	ENST00000580158	ARL4A	P40617	200 aa		5.62	□□□□□ -1.51
KPNB1-209	ENST00000580158	CYB561	P49447	251 aa		5.62	□□□□□ -1.51
KPNB1-209	ENST00000580158	ST13	P50502	369 aa	Known RBP	5.62	□□□□□ -1.51
KPNB1-209	ENST00000580158	ZNF135	P52742	658 aa	Predicted RBP	5.62	□□□□□ -1.51
KPNB1-209	ENST00000580158	ZNF143	P52747	638 aa	Predicted RBP	5.62	□□□□□ -1.51
KPNB1-209	ENST00000580158	STX17	P56962	302 aa		5.62	□□□□□ -1.51
KPNB1-209	ENST00000580158	TAS2R50	P59544	299 aa		5.62	□□□□□ -1.51
KPNB1-209	ENST00000580158	NOMO3	P69849	1222 aa		5.62	□□□□□ -1.51
KPNB1-209	ENST00000580158	DSC2	Q02487	901 aa		5.62	□□□□□ -1.51
KPNB1-209	ENST00000580158	TNK1	Q13470	666 aa		5.62	□□□□□ -1.51
KPNB1-209	ENST00000580158	KCNMB1	Q16558	191 aa		5.62	□□□□□ -1.51
KPNB1-209	ENST00000580158	EXOC3L4	Q17RC7	722 aa		5.62	□□□□□ -1.51
KPNB1-209	ENST00000580158	FBXL19-AS1	Q494R0	122 aa		5.62	□□□□□ -1.51
KPNB1-209	ENST00000580158	ATP13A5	Q4VNC0	1218 aa		5.62	□□□□□ -1.51
KPNB1-209	ENST00000580158	CMPK2	Q5EBM0	449 aa		5.62	□□□□□ -1.51
KPNB1-209	ENST00000580158	WIPI1	Q5MNZ9	446 aa	Predicted RBP	5.62	□□□□□ -1.51
KPNB1-209	ENST00000580158	FNBP1L	Q5T0N5	605 aa		5.62	□□□□□ -1.51
KPNB1-209	ENST00000580158	UBAP2	Q5T6F2	1119 aa	Known RBP	5.62	□□□□□ -1.51
KPNB1-209	ENST00000580158	ERMARD	Q5T6L9	678 aa		5.62	□□□□□ -1.51
KPNB1-209	ENST00000580158	LCE4A	Q5TA78	99 aa		5.62	□□□□□ -1.51
KPNB1-209	ENST00000580158	RIPPLY2	Q5TAB7	128 aa		5.62	□□□□□ -1.51
KPNB1-209	ENST00000580158	PLAG1	Q6DJT9	500 aa		5.62	□□□□□ -1.51
KPNB1-209	ENST00000580158	NXPE4	Q6UWF7	544 aa		5.62	□□□□□ -1.51
KPNB1-209	ENST00000580158	TMCO3	Q6UWJ1	677 aa		5.62	□□□□□ -1.51
KPNB1-209	ENST00000580158	TMC3	Q7Z5M5	1100 aa		5.62	□□□□□ -1.51
KPNB1-209	ENST00000580158	TRIM59	Q8IWR1	403 aa		5.62	□□□□□ -1.51
KPNB1-209	ENST00000580158	FAM71A	Q8IYT1	594 aa		5.62	□□□□□ -1.51
KPNB1-209	ENST00000580158	SLC5A8	Q8N695	610 aa		5.62	□□□□□ -1.51
KPNB1-209	ENST00000580158	OR5M9	Q8NGP3	310 aa		5.62	□□□□□ -1.51
KPNB1-209	ENST00000580158	C16orf52	Q8NHV5	167 aa		5.62	□□□□□ -1.51
KPNB1-209	ENST00000580158	EID2B	Q96D98	161 aa		5.62	□□□□□ -1.51
KPNB1-209	ENST00000580158	RMDN2	Q96LZ7	410 aa		5.62	□□□□□ -1.51
KPNB1-209	ENST00000580158	OR2A14	Q96R47	310 aa		5.62	□□□□□ -1.51
KPNB1-209	ENST00000580158	SH3GL2	Q99962	352 aa		5.62	□□□□□ -1.51
KPNB1-209	ENST00000580158	PLCD4	Q9BRC7	762 aa		5.62	□□□□□ -1.51
KPNB1-209	ENST00000580158	THAP2	Q9H0W7	228 aa		5.62	□□□□□ -1.51
KPNB1-209	ENST00000580158	DEFB127	Q9H1M4	99 aa		5.62	□□□□□ -1.51
KPNB1-209	ENST00000580158	XKR8	Q9H6D3	395 aa		5.62	□□□□□ -1.51
KPNB1-209	ENST00000580158	ZWILCH	Q9H900	591 aa		5.62	□□□□□ -1.51
KPNB1-209	ENST00000580158	MAGEE1	Q9HCI5	957 aa		5.62	□□□□□ -1.51
KPNB1-209	ENST00000580158	PNPLA3	Q9NST1	481 aa		5.62	□□□□□ -1.51
KPNB1-209	ENST00000580158	INTS7	Q9NVH2	962 aa	Known RBP	5.62	□□□□□ -1.51
KPNB1-209	ENST00000580158	C14orf105	Q9NVL8	296 aa		5.62	□□□□□ -1.51
KPNB1-209	ENST00000580158	ALKBH4	Q9NXW9	302 aa		5.62	□□□□□ -1.51
KPNB1-209	ENST00000580158	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	5.62	□□□□□ -1.51	3e-7	■□□□□ 10.2
KPNB1-209	ENST00000580158	TRPC4	Q9UBN4	977 aa		5.62	□□□□□ -1.51
KPNB1-209	ENST00000580158	LPAR3	Q9UBY5	353 aa		5.62	□□□□□ -1.51
KPNB1-209	ENST00000580158	C19orf25	Q9UFG5	118 aa	Predicted RBP	5.62	□□□□□ -1.51
KPNB1-209	ENST00000580158	CFAP45	Q9UL16	551 aa		5.62	□□□□□ -1.51
KPNB1-209	ENST00000580158	CDC14A	Q9UNH5	594 aa		5.62	□□□□□ -1.51
KPNB1-209	ENST00000580158	NOTCH1	P46531	2555 aa		5.62	□□□□□ -1.51
KPNB1-209	ENST00000580158	IGLV3-12	A0A075B6K2	115 aa		5.61	□□□□□ -1.51
KPNB1-209	ENST00000580158	SIGLEC16	A6NMB1	481 aa		5.61	□□□□□ -1.51
KPNB1-209	ENST00000580158	ACOT7	O00154	380 aa		5.61	□□□□□ -1.51
KPNB1-209	ENST00000580158	QSOX1	O00391	747 aa		5.61	□□□□□ -1.51
KPNB1-209	ENST00000580158	KDM1A	O60341	852 aa		5.61	□□□□□ -1.51
KPNB1-209	ENST00000580158	MME	P08473	750 aa		5.61	□□□□□ -1.51
KPNB1-209	ENST00000580158	PNMA6A	P0CW24	399 aa	Predicted RBP	5.61	□□□□□ -1.51
KPNB1-209	ENST00000580158	C8orf89	P0DMQ9	161 aa		5.61	□□□□□ -1.51
KPNB1-209	ENST00000580158	TPH1	P17752	444 aa		5.61	□□□□□ -1.51
KPNB1-209	ENST00000580158	BMP5	P22003	454 aa		5.61	□□□□□ -1.51
KPNB1-209	ENST00000580158	MCM3	P25205	808 aa		5.61	□□□□□ -1.51
KPNB1-209	ENST00000580158	AKT1	P31749	480 aa		5.61	□□□□□ -1.51
KPNB1-209	ENST00000580158	SERPINB6	P35237	376 aa		5.61	□□□□□ -1.51
KPNB1-209	ENST00000580158	SOX5	P35711	763 aa		5.61	□□□□□ -1.51
KPNB1-209	ENST00000580158	PPP1R2	P41236	205 aa		5.61	□□□□□ -1.51
KPNB1-209	ENST00000580158	CD86	P42081	329 aa		5.61	□□□□□ -1.51
KPNB1-209	ENST00000580158	HCAR3	P49019	387 aa		5.61	□□□□□ -1.51
KPNB1-209	ENST00000580158	PTH2R	P49190	550 aa		5.61	□□□□□ -1.51
KPNB1-209	ENST00000580158	ZNF165	P49910	485 aa		5.61	□□□□□ -1.51
KPNB1-209	ENST00000580158	SORD	Q00796	357 aa		5.61	□□□□□ -1.51
KPNB1-209	ENST00000580158	DEFA6	Q01524	100 aa		5.61	□□□□□ -1.51
KPNB1-209	ENST00000580158	PRKG2	Q13237	762 aa		5.61	□□□□□ -1.51
KPNB1-209	ENST00000580158	DPYS	Q14117	519 aa		5.61	□□□□□ -1.51
KPNB1-209	ENST00000580158	EXT1	Q16394	746 aa		5.61	□□□□□ -1.51
KPNB1-209	ENST00000580158	PPP2R5E	Q16537	467 aa		5.61	□□□□□ -1.51
KPNB1-209	ENST00000580158	ACKR1	Q16570	336 aa		5.61	□□□□□ -1.51
KPNB1-209	ENST00000580158	MLANA	Q16655	118 aa		5.61	□□□□□ -1.51
KPNB1-209	ENST00000580158	MUM1	Q2TAK8	710 aa		5.61	□□□□□ -1.51
KPNB1-209	ENST00000580158	FIGN	Q5HY92	759 aa		5.61	□□□□□ -1.51
KPNB1-209	ENST00000580158	C1orf185	Q5T7R7	199 aa		5.61	□□□□□ -1.51
KPNB1-209	ENST00000580158	ZDHHC20	Q5W0Z9	365 aa		5.61	□□□□□ -1.51
KPNB1-209	ENST00000580158	CCDC70	Q6NSX1	233 aa		5.61	□□□□□ -1.51
KPNB1-209	ENST00000580158	TMEM205	Q6UW68	189 aa		5.61	□□□□□ -1.51
KPNB1-209	ENST00000580158	UNC5A	Q6ZN44	842 aa		5.61	□□□□□ -1.51
KPNB1-209	ENST00000580158	DET1	Q7L5Y6	550 aa		5.61	□□□□□ -1.51
KPNB1-209	ENST00000580158	CREBRF	Q8IUR6	639 aa		5.61	□□□□□ -1.51
KPNB1-209	ENST00000580158	LRRC49	Q8IUZ0	686 aa		5.61	□□□□□ -1.51
KPNB1-209	ENST00000580158	LIX1	Q8N485	282 aa		5.61	□□□□□ -1.51

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