RNA–Protein interactions for RNA: ENST00000577197.1

TSEN54-204, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-204ENST00000577197 NR6A1Q15406 480 aa11.97□□□□□ -0.49
TSEN54-204ENST00000577197 CCDC6Q16204 474 aa11.97□□□□□ -0.49
TSEN54-204ENST00000577197 IMPG1Q17R60 797 aa11.97□□□□□ -0.49
TSEN54-204ENST00000577197 AP5B1Q2VPB7 878 aa11.97□□□□□ -0.49
TSEN54-204ENST00000577197 C14orf28Q4W4Y0 310 aa11.97□□□□□ -0.49
TSEN54-204ENST00000577197 ZNF542PQ5EBM4 170 aa11.97□□□□□ -0.49
TSEN54-204ENST00000577197 C6orf132Q5T0Z8 1188 aa11.97□□□□□ -0.49
TSEN54-204ENST00000577197 ZNF425Q6IV72 752 aa11.97□□□□□ -0.49
TSEN54-204ENST00000577197 SUSD1Q6UWL2 747 aa11.97□□□□□ -0.49
TSEN54-204ENST00000577197 ZNF438Q7Z4V0 828 aa11.97□□□□□ -0.49
TSEN54-204ENST00000577197 OOSP2Q86WS3 158 aa11.97□□□□□ -0.49
TSEN54-204ENST00000577197 MYLK4Q86YV6 388 aaPredicted RBP11.97□□□□□ -0.49
TSEN54-204ENST00000577197 MIER2Q8N344 545 aa11.97□□□□□ -0.49
TSEN54-204ENST00000577197 DCBLD1Q8N8Z6 715 aa11.97□□□□□ -0.49
TSEN54-204ENST00000577197 OR2T11Q8NH01 316 aa11.97□□□□□ -0.49
TSEN54-204ENST00000577197 LMX1AQ8TE12 382 aa11.97□□□□□ -0.49
TSEN54-204ENST00000577197 STARD8Q92502 1023 aa11.97□□□□□ -0.49
TSEN54-204ENST00000577197 ZUFSPQ96AP4 578 aa11.97□□□□□ -0.49
TSEN54-204ENST00000577197 ACPTQ9BZG2 426 aa11.97□□□□□ -0.49
TSEN54-204ENST00000577197 GAREM1Q9H706 876 aa11.97□□□□□ -0.49
TSEN54-204ENST00000577197 MRPS30Q9NP92 439 aaKnown RBP11.97□□□□□ -0.49
TSEN54-204ENST00000577197 SEMA4GQ9NTN9 838 aa11.97□□□□□ -0.49
TSEN54-204ENST00000577197 NDE1Q9NXR1 346 aa11.97□□□□□ -0.49
TSEN54-204ENST00000577197 NLGN3Q9NZ94 848 aa11.97□□□□□ -0.49
TSEN54-204ENST00000577197 VPS29Q9UBQ0 182 aa11.97□□□□□ -0.49
TSEN54-204ENST00000577197 EPHA6Q9UF33 1036 aa11.97□□□□□ -0.49
TSEN54-204ENST00000577197 EIF3LQ9Y262 564 aaKnown RBP11.97□□□□□ -0.49
TSEN54-204ENST00000577197 RUVBL1Q9Y265 456 aaKnown RBP11.97□□□□□ -0.49
TSEN54-204ENST00000577197 BTRCQ9Y297 605 aa11.97□□□□□ -0.49
TSEN54-204ENST00000577197 GPR45Q9Y5Y3 372 aa11.97□□□□□ -0.49
TSEN54-204ENST00000577197 HEATR5BQ9P2D3 2071 aa11.97□□□□□ -0.49
TSEN54-204ENST00000577197 PI4KAP42356 2102 aa11.96□□□□□ -0.49
TSEN54-204ENST00000577197 PCDH15Q96QU1 1955 aa11.96□□□□□ -0.49
TSEN54-204ENST00000577197 LNP1A1A4G5 178 aa11.96□□□□□ -0.49
TSEN54-204ENST00000577197 OR5K3A6NET4 321 aa11.96□□□□□ -0.49
TSEN54-204ENST00000577197 ERICH4A6NGS2 130 aa11.96□□□□□ -0.49
TSEN54-204ENST00000577197 PSMD12O00232 456 aaPredicted RBP11.96□□□□□ -0.49
TSEN54-204ENST00000577197 FFAR3O14843 346 aa11.96□□□□□ -0.49
TSEN54-204ENST00000577197 GPR42O15529 346 aa11.96□□□□□ -0.49
TSEN54-204ENST00000577197 ZW10O43264 779 aa11.96□□□□□ -0.49
TSEN54-204ENST00000577197 NUDT21O43809 227 aaKnown RBP11.96□□□□□ -0.49
TSEN54-204ENST00000577197 CLEC3AO75596 197 aa11.96□□□□□ -0.49
TSEN54-204ENST00000577197 ALPPL2P10696 532 aa11.96□□□□□ -0.49
TSEN54-204ENST00000577197 CDH1P12830 882 aa11.96□□□□□ -0.49
TSEN54-204ENST00000577197 JAK1P23458 1154 aa11.96□□□□□ -0.49
TSEN54-204ENST00000577197 PTX3P26022 381 aaPredicted RBP11.96□□□□□ -0.49
TSEN54-204ENST00000577197 EPHA8P29322 1005 aaPredicted RBP11.96□□□□□ -0.49
TSEN54-204ENST00000577197 TSFMP43897 325 aaKnown RBP11.96□□□□□ -0.49
TSEN54-204ENST00000577197 GPR3P46089 330 aa11.96□□□□□ -0.49
TSEN54-204ENST00000577197 CSNK1G2P78368 415 aa11.96□□□□□ -0.49
TSEN54-204ENST00000577197 SPEM2Q0P670 501 aa11.96□□□□□ -0.49
TSEN54-204ENST00000577197 KIAA0040Q15053 153 aa11.96□□□□□ -0.49
TSEN54-204ENST00000577197 DPY19L1Q2PZI1 675 aa11.96□□□□□ -0.49
TSEN54-204ENST00000577197 TCHHL1Q5QJ38 904 aaPredicted RBP11.96□□□□□ -0.49
TSEN54-204ENST00000577197 CACHD1Q5VU97 1274 aa11.96□□□□□ -0.49
TSEN54-204ENST00000577197 KANSL1Q7Z3B3 1105 aa11.96□□□□□ -0.49
TSEN54-204ENST00000577197 ARL14Q8N4G2 192 aa11.96□□□□□ -0.49
TSEN54-204ENST00000577197 ARL10Q8N8L6 244 aa11.96□□□□□ -0.49
TSEN54-204ENST00000577197 FAM181AQ8N9Y4 354 aa11.96□□□□□ -0.49
TSEN54-204ENST00000577197 FNDC5Q8NAU1 212 aa11.96□□□□□ -0.49
TSEN54-204ENST00000577197 TRPV3Q8NET8 790 aa11.96□□□□□ -0.49
TSEN54-204ENST00000577197 HUS1BQ8NHY5 278 aa11.96□□□□□ -0.49
TSEN54-204ENST00000577197 FLVCR1-AS1Q8TAF5 88 aa11.96□□□□□ -0.49
TSEN54-204ENST00000577197 CD180Q99467 661 aa11.96□□□□□ -0.49
TSEN54-204ENST00000577197 SLC25A23Q9BV35 468 aa11.96□□□□□ -0.49
TSEN54-204ENST00000577197 LRMDAQ9H2I8 198 aa11.96□□□□□ -0.49
TSEN54-204ENST00000577197 MMADHCQ9H3L0 296 aaPredicted RBP11.96□□□□□ -0.49
TSEN54-204ENST00000577197 SMOC1Q9H4F8 434 aa11.96□□□□□ -0.49
TSEN54-204ENST00000577197 DMRT3Q9NQL9 472 aa11.96□□□□□ -0.49
TSEN54-204ENST00000577197 DNAAF2Q9NVR5 837 aaKnown RBP11.96□□□□□ -0.49
TSEN54-204ENST00000577197 PLAGL1Q9UM63 463 aa11.96□□□□□ -0.49
TSEN54-204ENST00000577197 SDK1Q7Z5N4 2213 aa11.95□□□□□ -0.5
TSEN54-204ENST00000577197 ATP6AP2A0A1C7CYW4 349 aa11.95□□□□□ -0.5
TSEN54-204ENST00000577197 OR2A25A4D2G3 310 aa11.95□□□□□ -0.5
TSEN54-204ENST00000577197 CFAP73A6NFT4 308 aa11.95□□□□□ -0.5
TSEN54-204ENST00000577197 PCDHGA12O60330 932 aa11.95□□□□□ -0.5
TSEN54-204ENST00000577197 ATP6AP2O75787 350 aa11.95□□□□□ -0.5
TSEN54-204ENST00000577197 CELA2BP08218 269 aaPredicted RBP11.95□□□□□ -0.5
TSEN54-204ENST00000577197 ALDOCP09972 364 aaKnown RBP11.95□□□□□ -0.5
TSEN54-204ENST00000577197 T-ENOLP0DO92 83 aa11.95□□□□□ -0.5
TSEN54-204ENST00000577197 ESRRAP11474 423 aaPredicted RBP11.95□□□□□ -0.5
TSEN54-204ENST00000577197 GPX3P22352 226 aa11.95□□□□□ -0.5
TSEN54-204ENST00000577197 PIK3R1P27986 724 aa11.95□□□□□ -0.5
TSEN54-204ENST00000577197 PTPN4P29074 926 aa11.95□□□□□ -0.5
TSEN54-204ENST00000577197 PEBP1P30086 187 aaKnown RBP11.95□□□□□ -0.5
TSEN54-204ENST00000577197 ASMTP46597 345 aa11.95□□□□□ -0.5
TSEN54-204ENST00000577197 SCTRP47872 440 aa11.95□□□□□ -0.5
TSEN54-204ENST00000577197 RPS15AP62244 130 aaKnown RBP11.95□□□□□ -0.5
TSEN54-204ENST00000577197 SF3A3Q12874 501 aaKnown RBP eCLIP11.95□□□□□ -0.5
TSEN54-204ENST00000577197 STX5Q13190 355 aa11.95□□□□□ -0.5
TSEN54-204ENST00000577197 SHBQ15464 509 aa11.95□□□□□ -0.5
TSEN54-204ENST00000577197 CLPPQ16740 277 aaPredicted RBP11.95□□□□□ -0.5
TSEN54-204ENST00000577197 TMEM35AQ53FP2 167 aa11.95□□□□□ -0.5
TSEN54-204ENST00000577197 MANEAQ5SRI9 462 aa11.95□□□□□ -0.5
TSEN54-204ENST00000577197 CATSPEREQ5SY80 951 aa11.95□□□□□ -0.5
TSEN54-204ENST00000577197 TMEM198Q66K66 360 aa11.95□□□□□ -0.5
TSEN54-204ENST00000577197 TCEAL6Q6IPX3 200 aa11.95□□□□□ -0.5
TSEN54-204ENST00000577197 ZCCHC8Q6NZY4 707 aaKnown RBP11.95□□□□□ -0.5
TSEN54-204ENST00000577197 SPESP1Q6UW49 350 aa11.95□□□□□ -0.5
TSEN54-204ENST00000577197 TREML1Q86YW5 311 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms