RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 PMEPA1Q969W9 287 aa13.39□□□□□ -0.27
RPAIN-217ENST00000575711 ATP6V1E2Q96A05 226 aa13.39□□□□□ -0.27
RPAIN-217ENST00000575711 TLCD1Q96CP7 247 aa13.39□□□□□ -0.27
RPAIN-217ENST00000575711 THAP11Q96EK4 314 aa13.39□□□□□ -0.27
RPAIN-217ENST00000575711 TMEM237Q96Q45 408 aa13.39□□□□□ -0.27
RPAIN-217ENST00000575711 SH3GL2Q99962 352 aa13.39□□□□□ -0.27
RPAIN-217ENST00000575711 IPPKQ9H8X2 491 aa13.39□□□□□ -0.27
RPAIN-217ENST00000575711 PCTPQ9UKL6 214 aa13.39□□□□□ -0.27
RPAIN-217ENST00000575711 PCDHGA7Q9Y5G6 932 aa13.39□□□□□ -0.27
RPAIN-217ENST00000575711 ANKRD12Q6UB98 2062 aa13.39□□□□□ -0.27
RPAIN-217ENST00000575711 TRBC2A0A5B9 178 aa13.38□□□□□ -0.27
RPAIN-217ENST00000575711 CDRT15L2A8MXV6 281 aa13.38□□□□□ -0.27
RPAIN-217ENST00000575711 H0YGG7 62 aa13.38□□□□□ -0.27
RPAIN-217ENST00000575711 OR1F1O43749 312 aa13.38□□□□□ -0.27
RPAIN-217ENST00000575711 SASH3O75995 380 aa13.38□□□□□ -0.27
RPAIN-217ENST00000575711 ZWINTO95229 277 aa13.38□□□□□ -0.27
RPAIN-217ENST00000575711 EIF2S1P05198 315 aaKnown RBP13.38□□□□□ -0.27
RPAIN-217ENST00000575711 SLC5A2P31639 672 aa13.38□□□□□ -0.27
RPAIN-217ENST00000575711 ARL1P40616 181 aaPredicted RBP13.38□□□□□ -0.27
RPAIN-217ENST00000575711 VSX2P58304 361 aaPredicted RBP13.38□□□□□ -0.27
RPAIN-217ENST00000575711 DNAJB13P59910 316 aa13.38□□□□□ -0.27
RPAIN-217ENST00000575711 ERVPABLB-1P60509 514 aa13.38□□□□□ -0.27
RPAIN-217ENST00000575711 ARF3P61204 181 aaPredicted RBP13.38□□□□□ -0.27
RPAIN-217ENST00000575711 ASPHQ12797 758 aa13.38□□□□□ -0.27
RPAIN-217ENST00000575711 LAPTM5Q13571 262 aa13.38□□□□□ -0.27
RPAIN-217ENST00000575711 DOC2AQ14183 400 aa13.38□□□□□ -0.27
RPAIN-217ENST00000575711 SLBPQ14493 270 aaKnown RBP eCLIP13.38□□□□□ -0.27
RPAIN-217ENST00000575711 PCLAFQ15004 111 aa13.38□□□□□ -0.27
RPAIN-217ENST00000575711 TBCCQ15814 346 aa13.38□□□□□ -0.27
RPAIN-217ENST00000575711 LIPMQ5VYY2 423 aa13.38□□□□□ -0.27
RPAIN-217ENST00000575711 FRMPD2BQ6IN97 320 aa13.38□□□□□ -0.27
RPAIN-217ENST00000575711 TLDC1Q6P9B6 456 aa13.38□□□□□ -0.27
RPAIN-217ENST00000575711 ZNF483Q8TF39 744 aaPredicted RBP13.38□□□□□ -0.27
RPAIN-217ENST00000575711 SREK1Q8WXA9 508 aaKnown RBP13.38□□□□□ -0.27
RPAIN-217ENST00000575711 ARL8AQ96BM9 186 aa13.38□□□□□ -0.27
RPAIN-217ENST00000575711 L3HYPDHQ96EM0 354 aa13.38□□□□□ -0.27
RPAIN-217ENST00000575711 WDR34Q96EX3 536 aa13.38□□□□□ -0.27
RPAIN-217ENST00000575711 PTCD3Q96EY7 689 aaKnown RBP13.38□□□□□ -0.27
RPAIN-217ENST00000575711 ATP6V1G3Q96LB4 118 aa13.38□□□□□ -0.27
RPAIN-217ENST00000575711 ZNF578Q96N58 590 aaPredicted RBP13.38□□□□□ -0.27
RPAIN-217ENST00000575711 NSUN5Q96P11 429 aaKnown RBP13.38□□□□□ -0.27
RPAIN-217ENST00000575711 OR2A5Q96R48 311 aa13.38□□□□□ -0.27
RPAIN-217ENST00000575711 EFCAB11Q9BUY7 163 aa13.38□□□□□ -0.27
RPAIN-217ENST00000575711 SARGQ9BW04 601 aa13.38□□□□□ -0.27
RPAIN-217ENST00000575711 SLC7A5P2Q9GIP4 190 aa13.38□□□□□ -0.27
RPAIN-217ENST00000575711 PITHD1Q9GZP4 211 aaPredicted RBP13.38□□□□□ -0.27
RPAIN-217ENST00000575711 NOL11Q9H8H0 719 aaKnown RBP13.38□□□□□ -0.27
RPAIN-217ENST00000575711 ACTR8Q9H981 624 aa13.38□□□□□ -0.27
RPAIN-217ENST00000575711 ASCL3Q9NQ33 180 aa13.38□□□□□ -0.27
RPAIN-217ENST00000575711 ZNF446Q9NWS9 450 aa13.38□□□□□ -0.27
RPAIN-217ENST00000575711 OXSMQ9NWU1 459 aa13.38□□□□□ -0.27
RPAIN-217ENST00000575711 GEMIN8Q9NWZ8 242 aaKnown RBP13.38□□□□□ -0.27
RPAIN-217ENST00000575711 FOXJ2Q9P0K8 574 aa13.38□□□□□ -0.27
RPAIN-217ENST00000575711 PCDHGA4Q9Y5G9 962 aa13.38□□□□□ -0.27
RPAIN-217ENST00000575711 AP1M2Q9Y6Q5 423 aa13.38□□□□□ -0.27
RPAIN-217ENST00000575711 ADAMTS20P59510 1910 aa13.37□□□□□ -0.27
RPAIN-217ENST00000575711 KCNE1BA0A087WTH5 132 aa13.37□□□□□ -0.27
RPAIN-217ENST00000575711 LOC105369274A0A096LPK9 316 aa13.37□□□□□ -0.27
RPAIN-217ENST00000575711 LOC102723532A0A0G2JNH3 316 aa13.37□□□□□ -0.27
RPAIN-217ENST00000575711 TXNDC9O14530 226 aa13.37□□□□□ -0.27
RPAIN-217ENST00000575711 ZSCAN9O15535 394 aaPredicted RBP13.37□□□□□ -0.27
RPAIN-217ENST00000575711 UGDHO60701 494 aa13.37□□□□□ -0.27
RPAIN-217ENST00000575711 TRIM13O60858 407 aa13.37□□□□□ -0.27
RPAIN-217ENST00000575711 SCRG1O75711 98 aa13.37□□□□□ -0.27
RPAIN-217ENST00000575711 CD82P27701 267 aa13.37□□□□□ -0.27
RPAIN-217ENST00000575711 BCL6P41182 706 aa13.37□□□□□ -0.27
RPAIN-217ENST00000575711 CASP2P42575 452 aa13.37□□□□□ -0.27
RPAIN-217ENST00000575711 CCNG1P51959 295 aa13.37□□□□□ -0.27
RPAIN-217ENST00000575711 CDH13P55290 713 aa13.37□□□□□ -0.27
RPAIN-217ENST00000575711 NAA20P61599 178 aa13.37□□□□□ -0.27
RPAIN-217ENST00000575711 CLCQ05315 142 aa13.37□□□□□ -0.27
RPAIN-217ENST00000575711 PCDH1Q08174 1060 aa13.37□□□□□ -0.27
RPAIN-217ENST00000575711 GRM7Q14831 915 aa13.37□□□□□ -0.27
RPAIN-217ENST00000575711 RBBP5Q15291 538 aaKnown RBP13.37□□□□□ -0.27
RPAIN-217ENST00000575711 RBBP7Q16576 425 aa13.37□□□□□ -0.27
RPAIN-217ENST00000575711 HIST2H2ACQ16777 129 aaPredicted RBP13.37□□□□□ -0.27
RPAIN-217ENST00000575711 UNC50Q53HI1 259 aa13.37□□□□□ -0.27
RPAIN-217ENST00000575711 CFAP157Q5JU67 520 aa13.37□□□□□ -0.27
RPAIN-217ENST00000575711 WASHC2DQ5SRD0 308 aa13.37□□□□□ -0.27
RPAIN-217ENST00000575711 LIPJQ5W064 366 aa13.37□□□□□ -0.27
RPAIN-217ENST00000575711 HIST2H2AA3Q6FI13 130 aa13.37□□□□□ -0.27
RPAIN-217ENST00000575711 PWWP2BQ6NUJ5 590 aa13.37□□□□□ -0.27
RPAIN-217ENST00000575711 MYLK4Q86YV6 388 aaPredicted RBP13.37□□□□□ -0.27
RPAIN-217ENST00000575711 C10orf107Q8IVU9 208 aa13.37□□□□□ -0.27
RPAIN-217ENST00000575711 OR4N4Q8N0Y3 316 aa13.37□□□□□ -0.27
RPAIN-217ENST00000575711 ZNF655Q8N720 491 aaPredicted RBP13.37□□□□□ -0.27
RPAIN-217ENST00000575711 CSNK1A1LQ8N752 337 aa13.37□□□□□ -0.27
RPAIN-217ENST00000575711 CCNYL1Q8N7R7 359 aa13.37□□□□□ -0.27
RPAIN-217ENST00000575711 TTC29Q8NA56 475 aaPredicted RBP13.37□□□□□ -0.27
RPAIN-217ENST00000575711 MFSD9Q8NBP5 474 aa13.37□□□□□ -0.27
RPAIN-217ENST00000575711 GATA6Q92908 595 aa13.37□□□□□ -0.27
RPAIN-217ENST00000575711 UBE2E3Q969T4 207 aa13.37□□□□□ -0.27
RPAIN-217ENST00000575711 ZNF285Q96NJ3 590 aa13.37□□□□□ -0.27
RPAIN-217ENST00000575711 NLNQ9BYT8 704 aa13.37□□□□□ -0.27
RPAIN-217ENST00000575711 ULBP3Q9BZM4 244 aa13.37□□□□□ -0.27
RPAIN-217ENST00000575711 SPRTNQ9H040 489 aaPredicted RBP13.37□□□□□ -0.27
RPAIN-217ENST00000575711 SPNS1Q9H2V7 528 aa13.37□□□□□ -0.27
RPAIN-217ENST00000575711 SEMA4BQ9NPR2 832 aaPredicted RBP13.37□□□□□ -0.27
RPAIN-217ENST00000575711 STK38LQ9Y2H1 464 aa13.37□□□□□ -0.27
RPAIN-217ENST00000575711 PCDHB3Q9Y5E6 796 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms