RNA–Protein interactions for RNA: ENST00000575116.1

PRPF8-212, Transcript of pre-mRNA processing factor 8, human

TSL 3

Gene PRPF8, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-212	ENST00000575116	NCSTN	Q92542	709 aa		11.43	□□□□□ -0.58
PRPF8-212	ENST00000575116	THAP11	Q96EK4	314 aa		11.43	□□□□□ -0.58
PRPF8-212	ENST00000575116	C19orf60	Q96EN9	201 aa		11.43	□□□□□ -0.58
PRPF8-212	ENST00000575116	MAEL	Q96JY0	434 aa	Known RBP	11.43	□□□□□ -0.58
PRPF8-212	ENST00000575116	CNDP2	Q96KP4	475 aa	Known RBP	11.43	□□□□□ -0.58
PRPF8-212	ENST00000575116	CCDC28B	Q9BUN5	200 aa		11.43	□□□□□ -0.58
PRPF8-212	ENST00000575116	NUF2	Q9BZD4	464 aa		11.43	□□□□□ -0.58
PRPF8-212	ENST00000575116	CHRNA10	Q9GZZ6	450 aa		11.43	□□□□□ -0.58
PRPF8-212	ENST00000575116	RHBG	Q9H310	441 aa		11.43	□□□□□ -0.58
PRPF8-212	ENST00000575116	TUBB1	Q9H4B7	451 aa		11.43	□□□□□ -0.58
PRPF8-212	ENST00000575116	BRF2	Q9HAW0	419 aa		11.43	□□□□□ -0.58
PRPF8-212	ENST00000575116	PARD6A	Q9NPB6	346 aa		11.43	□□□□□ -0.58
PRPF8-212	ENST00000575116	RIC8B	Q9NVN3	520 aa		11.43	□□□□□ -0.58
PRPF8-212	ENST00000575116	SEMA5B	Q9P283	1151 aa		11.43	□□□□□ -0.58
PRPF8-212	ENST00000575116	DCTN4	Q9UJW0	460 aa		11.43	□□□□□ -0.58
PRPF8-212	ENST00000575116	BTBD3	Q9Y2F9	522 aa		11.43	□□□□□ -0.58
PRPF8-212	ENST00000575116	HCN4	Q9Y3Q4	1203 aa		11.43	□□□□□ -0.58
PRPF8-212	ENST00000575116	MN1	Q10571	1320 aa	Predicted RBP	11.42	□□□□□ -0.58
PRPF8-212	ENST00000575116	CABIN1	Q9Y6J0	2220 aa		11.42	□□□□□ -0.58
PRPF8-212	ENST00000575116		A0A0G2JND7	137 aa		11.42	□□□□□ -0.58
PRPF8-212	ENST00000575116	TLCD2	A6NGC4	264 aa		11.42	□□□□□ -0.58
PRPF8-212	ENST00000575116	ANKDD1B	A6NHY2	528 aa		11.42	□□□□□ -0.58
PRPF8-212	ENST00000575116	NPIPB8	E9PQR5	432 aa		11.42	□□□□□ -0.58
PRPF8-212	ENST00000575116	PIP5K1B	O14986	540 aa		11.42	□□□□□ -0.58
PRPF8-212	ENST00000575116	PDYN	P01213	254 aa		11.42	□□□□□ -0.58
PRPF8-212	ENST00000575116	MYF5	P13349	255 aa		11.42	□□□□□ -0.58
PRPF8-212	ENST00000575116	MAG	P20916	626 aa		11.42	□□□□□ -0.58
PRPF8-212	ENST00000575116	CDH3	P22223	829 aa		11.42	□□□□□ -0.58
PRPF8-212	ENST00000575116	SCTR	P47872	440 aa		11.42	□□□□□ -0.58
PRPF8-212	ENST00000575116	RPS15A	P62244	130 aa	Known RBP	11.42	□□□□□ -0.58
PRPF8-212	ENST00000575116	GABPB1	Q06547	395 aa	Predicted RBP	11.42	□□□□□ -0.58
PRPF8-212	ENST00000575116	ABRAXAS2	Q15018	415 aa		11.42	□□□□□ -0.58
PRPF8-212	ENST00000575116	SMU1	Q2TAY7	513 aa		11.42	□□□□□ -0.58
PRPF8-212	ENST00000575116	XKR7	Q5GH72	579 aa		11.42	□□□□□ -0.58
PRPF8-212	ENST00000575116	PERM1	Q5SV97	790 aa		11.42	□□□□□ -0.58
PRPF8-212	ENST00000575116	METTL21C	Q5VZV1	264 aa		11.42	□□□□□ -0.58
PRPF8-212	ENST00000575116	FCRL6	Q6DN72	434 aa		11.42	□□□□□ -0.58
PRPF8-212	ENST00000575116	IRGC	Q6NXR0	463 aa		11.42	□□□□□ -0.58
PRPF8-212	ENST00000575116	ACAD11	Q709F0	780 aa		11.42	□□□□□ -0.58
PRPF8-212	ENST00000575116	MAVS	Q7Z434	540 aa		11.42	□□□□□ -0.58
PRPF8-212	ENST00000575116	ADCK2	Q7Z695	626 aa		11.42	□□□□□ -0.58
PRPF8-212	ENST00000575116	NAXD	Q8IW45	347 aa		11.42	□□□□□ -0.58
PRPF8-212	ENST00000575116	DDIAS	Q8IXT1	998 aa		11.42	□□□□□ -0.58
PRPF8-212	ENST00000575116		Q8N9G6	341 aa	Predicted RBP	11.42	□□□□□ -0.58
PRPF8-212	ENST00000575116	CEP70	Q8NHQ1	597 aa		11.42	□□□□□ -0.58
PRPF8-212	ENST00000575116	WDR48	Q8TAF3	677 aa		11.42	□□□□□ -0.58
PRPF8-212	ENST00000575116	IFI44	Q8TCB0	444 aa		11.42	□□□□□ -0.58
PRPF8-212	ENST00000575116	THOC1	Q96FV9	657 aa	Known RBP	11.42	□□□□□ -0.58
PRPF8-212	ENST00000575116	METTL2A	Q96IZ6	378 aa	Known RBP	11.42	□□□□□ -0.58
PRPF8-212	ENST00000575116	TRAPPC9	Q96Q05	1148 aa		11.42	□□□□□ -0.58
PRPF8-212	ENST00000575116	CDC6	Q99741	560 aa		11.42	□□□□□ -0.58
PRPF8-212	ENST00000575116	CCDC3	Q9BQI4	270 aa		11.42	□□□□□ -0.58
PRPF8-212	ENST00000575116	TMEM120A	Q9BXJ8	343 aa		11.42	□□□□□ -0.58
PRPF8-212	ENST00000575116	SPNS1	Q9H2V7	528 aa		11.42	□□□□□ -0.58
PRPF8-212	ENST00000575116	LRRN3	Q9H3W5	708 aa		11.42	□□□□□ -0.58
PRPF8-212	ENST00000575116	RABEP2	Q9H5N1	569 aa		11.42	□□□□□ -0.58
PRPF8-212	ENST00000575116	NMRK1	Q9NWW6	199 aa		11.42	□□□□□ -0.58
PRPF8-212	ENST00000575116	PDP2	Q9P2J9	529 aa		11.42	□□□□□ -0.58
PRPF8-212	ENST00000575116	FTSJ1	Q9UET6	329 aa		11.42	□□□□□ -0.58
PRPF8-212	ENST00000575116	ARL2BP	Q9Y2Y0	163 aa		11.42	□□□□□ -0.58
PRPF8-212	ENST00000575116	AP1M2	Q9Y6Q5	423 aa		11.42	□□□□□ -0.58
PRPF8-212	ENST00000575116	C4orf47	A7E2U8	309 aa		11.41	□□□□□ -0.58
PRPF8-212	ENST00000575116	SDHD	O14521	159 aa		11.41	□□□□□ -0.58
PRPF8-212	ENST00000575116	HAT1	O14929	419 aa		11.41	□□□□□ -0.58
PRPF8-212	ENST00000575116	MAP3K7	O43318	606 aa		11.41	□□□□□ -0.58
PRPF8-212	ENST00000575116	RGS14	O43566	566 aa		11.41	□□□□□ -0.58
PRPF8-212	ENST00000575116	OR1F1	O43749	312 aa		11.41	□□□□□ -0.58
PRPF8-212	ENST00000575116	LCMT2	O60294	686 aa	Known RBP	11.41	□□□□□ -0.58
PRPF8-212	ENST00000575116	DIAPH2	O60879	1101 aa		11.41	□□□□□ -0.58
PRPF8-212	ENST00000575116	CBFA2T3	O75081	653 aa		11.41	□□□□□ -0.58
PRPF8-212	ENST00000575116	SKAP2	O75563	359 aa	Predicted RBP	11.41	□□□□□ -0.58
PRPF8-212	ENST00000575116	CLEC3A	O75596	197 aa		11.41	□□□□□ -0.58
PRPF8-212	ENST00000575116	CPNE6	O95741	557 aa		11.41	□□□□□ -0.58
PRPF8-212	ENST00000575116	LINC00032	P0C843	101 aa		11.41	□□□□□ -0.58
PRPF8-212	ENST00000575116	PCNA	P12004	261 aa		11.41	□□□□□ -0.58
PRPF8-212	ENST00000575116	PCSK2	P16519	638 aa		11.41	□□□□□ -0.58
PRPF8-212	ENST00000575116	PRPH2	P23942	346 aa		11.41	□□□□□ -0.58
PRPF8-212	ENST00000575116	PTX3	P26022	381 aa	Predicted RBP	11.41	□□□□□ -0.58
PRPF8-212	ENST00000575116	LSS	P48449	732 aa		11.41	□□□□□ -0.58
PRPF8-212	ENST00000575116	PPM1F	P49593	454 aa	Predicted RBP	11.41	□□□□□ -0.58
PRPF8-212	ENST00000575116	HTR6	P50406	440 aa		11.41	□□□□□ -0.58
PRPF8-212	ENST00000575116	IRX1	P78414	480 aa	Predicted RBP	11.41	□□□□□ -0.58
PRPF8-212	ENST00000575116	CCL7	P80098	99 aa		11.41	□□□□□ -0.58
PRPF8-212	ENST00000575116	MEF2A	Q02078	507 aa	Predicted RBP	11.41	□□□□□ -0.58
PRPF8-212	ENST00000575116	RBBP5	Q15291	538 aa	Known RBP	11.41	□□□□□ -0.58
PRPF8-212	ENST00000575116	TERF2	Q15554	542 aa		11.41	□□□□□ -0.58
PRPF8-212	ENST00000575116	AMZ1	Q400G9	498 aa		11.41	□□□□□ -0.58
PRPF8-212	ENST00000575116	SLC9B1	Q4ZJI4	515 aa		11.41	□□□□□ -0.58
PRPF8-212	ENST00000575116	ZC3H12B	Q5HYM0	836 aa	Known RBP	11.41	□□□□□ -0.58
PRPF8-212	ENST00000575116	TCHHL1	Q5QJ38	904 aa	Predicted RBP	11.41	□□□□□ -0.58
PRPF8-212	ENST00000575116	NKAIN2	Q5VXU1	208 aa		11.41	□□□□□ -0.58
PRPF8-212	ENST00000575116	FBXO42	Q6P3S6	717 aa		11.41	□□□□□ -0.58
PRPF8-212	ENST00000575116	TMEM71	Q6P5X7	295 aa		11.41	□□□□□ -0.58
PRPF8-212	ENST00000575116		Q6ZSR9	355 aa		11.41	□□□□□ -0.58
PRPF8-212	ENST00000575116	LARP4	Q71RC2	724 aa	Known RBP eCLIP	11.41	□□□□□ -0.58
PRPF8-212	ENST00000575116	TRIM73	Q86UV7	250 aa		11.41	□□□□□ -0.58
PRPF8-212	ENST00000575116	KMT5C	Q86Y97	462 aa		11.41	□□□□□ -0.58
PRPF8-212	ENST00000575116	FAM20C	Q8IXL6	584 aa		11.41	□□□□□ -0.58
PRPF8-212	ENST00000575116	PARP9	Q8IXQ6	854 aa		11.41	□□□□□ -0.58
PRPF8-212	ENST00000575116	MFSD9	Q8NBP5	474 aa		11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 703.6 ms