RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 CXorf56Q9H5V9 222 aa5.28□□□□□ -1.56
SF3B3-214ENST00000572365 ASB7Q9H672 318 aa5.28□□□□□ -1.56
SF3B3-214ENST00000572365 ERVMER34-1Q9H9K5 563 aa5.28□□□□□ -1.56
SF3B3-214ENST00000572365 PAPOLBQ9NRJ5 636 aaKnown RBP5.28□□□□□ -1.56
SF3B3-214ENST00000572365 ANAPC2Q9UJX6 822 aa5.28□□□□□ -1.56
SF3B3-214ENST00000572365 LAMP3Q9UQV4 416 aa5.28□□□□□ -1.56
SF3B3-214ENST00000572365 TP53TG5Q9Y2B4 290 aa5.28□□□□□ -1.56
SF3B3-214ENST00000572365 C2CD2Q9Y426 696 aa5.28□□□□□ -1.56
SF3B3-214ENST00000572365 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.28□□□□□ -1.56
SF3B3-214ENST00000572365 NYNRINQ9P2P1 1898 aaKnown RBP5.28□□□□□ -1.56
SF3B3-214ENST00000572365 KIR2DS5A0A0G2JLQ3 304 aa5.27□□□□□ -1.57
SF3B3-214ENST00000572365 GOLGA6L7A0A1B0GV03 622 aa5.27□□□□□ -1.57
SF3B3-214ENST00000572365 FOXO6A8MYZ6 492 aa5.27□□□□□ -1.57
SF3B3-214ENST00000572365 KIR2DS3K7RE56 304 aa5.27□□□□□ -1.57
SF3B3-214ENST00000572365 RHODO00212 210 aa5.27□□□□□ -1.57
SF3B3-214ENST00000572365 LDLRAD4O15165 306 aa5.27□□□□□ -1.57
SF3B3-214ENST00000572365 YKT6O15498 198 aa5.27□□□□□ -1.57
SF3B3-214ENST00000572365 AKAP8O43823 692 aaKnown RBP5.27□□□□□ -1.57
SF3B3-214ENST00000572365 JAK2O60674 1132 aa5.27□□□□□ -1.57
SF3B3-214ENST00000572365 UGDHO60701 494 aa5.27□□□□□ -1.57
SF3B3-214ENST00000572365 IPO7O95373 1038 aaKnown RBP5.27□□□□□ -1.57
SF3B3-214ENST00000572365 PENKP01210 267 aaPredicted RBP5.27□□□□□ -1.57
SF3B3-214ENST00000572365 IL1BP01584 269 aa5.27□□□□□ -1.57
SF3B3-214ENST00000572365 PLA2G4BP0C869 781 aa5.27□□□□□ -1.57
SF3B3-214ENST00000572365 CCDC130P13994 396 aa5.27□□□□□ -1.57
SF3B3-214ENST00000572365 CORO1AP31146 461 aaKnown RBP5.27□□□□□ -1.57
SF3B3-214ENST00000572365 CD70P32970 193 aa5.27□□□□□ -1.57
SF3B3-214ENST00000572365 ARSFP54793 590 aa5.27□□□□□ -1.57
SF3B3-214ENST00000572365 HNRNPH2P55795 449 aaKnown RBP5.27□□□□□ -1.57
SF3B3-214ENST00000572365 RPS13P62277 151 aaKnown RBP5.27□□□□□ -1.57
SF3B3-214ENST00000572365 RBP5P82980 135 aa5.27□□□□□ -1.57
SF3B3-214ENST00000572365 PRKG2Q13237 762 aa5.27□□□□□ -1.57
SF3B3-214ENST00000572365 DCTN2Q13561 401 aaKnown RBP5.27□□□□□ -1.57
SF3B3-214ENST00000572365 CST6Q15828 149 aa5.27□□□□□ -1.57
SF3B3-214ENST00000572365 ME3Q16798 604 aa5.27□□□□□ -1.57
SF3B3-214ENST00000572365 KRTAP15-1Q3LI76 137 aa5.27□□□□□ -1.57
SF3B3-214ENST00000572365 SYTL3Q4VX76 610 aa5.27□□□□□ -1.57
SF3B3-214ENST00000572365 MIDNQ504T8 468 aa5.27□□□□□ -1.57
SF3B3-214ENST00000572365 PRR30Q53SZ7 412 aaPredicted RBP5.27□□□□□ -1.57
SF3B3-214ENST00000572365 AAGABQ6PD74 315 aa5.27□□□□□ -1.57
SF3B3-214ENST00000572365 CPLX2Q6PUV4 134 aaKnown RBP5.27□□□□□ -1.57
SF3B3-214ENST00000572365 DEF8Q6ZN54 512 aa5.27□□□□□ -1.57
SF3B3-214ENST00000572365 PXKQ7Z7A4 578 aa5.27□□□□□ -1.57
SF3B3-214ENST00000572365 PRPF39Q86UA1 669 aaKnown RBP5.27□□□□□ -1.57
SF3B3-214ENST00000572365 TRIM74Q86UV6 250 aa5.27□□□□□ -1.57
SF3B3-214ENST00000572365 TRIM73Q86UV7 250 aa5.27□□□□□ -1.57
SF3B3-214ENST00000572365 DDIASQ8IXT1 998 aa5.27□□□□□ -1.57
SF3B3-214ENST00000572365 C4orf32Q8N8J7 132 aa5.27□□□□□ -1.57
SF3B3-214ENST00000572365 GPATCH11Q8N954 259 aa5.27□□□□□ -1.57
SF3B3-214ENST00000572365 KIAA1524Q8TCG1 905 aa5.27□□□□□ -1.57
SF3B3-214ENST00000572365 LMX1AQ8TE12 382 aa5.27□□□□□ -1.57
SF3B3-214ENST00000572365 CREB3L4Q8TEY5 395 aa5.27□□□□□ -1.57
SF3B3-214ENST00000572365 KLHL15Q96M94 604 aa5.27□□□□□ -1.57
SF3B3-214ENST00000572365 BARD1Q99728 777 aaKnown RBP5.27□□□□□ -1.57
SF3B3-214ENST00000572365 CCDC3Q9BQI4 270 aa5.27□□□□□ -1.57
SF3B3-214ENST00000572365 MMTAG2Q9BU76 263 aaKnown RBP5.27□□□□□ -1.57
SF3B3-214ENST00000572365 RSPH9Q9H1X1 276 aaPredicted RBP5.27□□□□□ -1.57
SF3B3-214ENST00000572365 TCEAL2Q9H3H9 227 aaPredicted RBP5.27□□□□□ -1.57
SF3B3-214ENST00000572365 SPAG4Q9NPE6 437 aa5.27□□□□□ -1.57
SF3B3-214ENST00000572365 PCDHB16Q9NRJ7 776 aa5.27□□□□□ -1.57
SF3B3-214ENST00000572365 KRT84Q9NSB2 600 aa5.27□□□□□ -1.57
SF3B3-214ENST00000572365 SNTG1Q9NSN8 517 aa5.27□□□□□ -1.57
SF3B3-214ENST00000572365 C20orf141Q9NUB4 165 aa5.27□□□□□ -1.57
SF3B3-214ENST00000572365 GDAP2Q9NXN4 497 aa5.27□□□□□ -1.57
SF3B3-214ENST00000572365 KIAA1456Q9P272 454 aa5.27□□□□□ -1.57
SF3B3-214ENST00000572365 KLHL13Q9P2N7 655 aa5.27□□□□□ -1.57
SF3B3-214ENST00000572365 SLCO3A1Q9UIG8 710 aa5.27□□□□□ -1.57
SF3B3-214ENST00000572365 RASAL2Q9UJF2 1139 aa5.27□□□□□ -1.57
SF3B3-214ENST00000572365 UTS2RQ9UKP6 389 aa5.27□□□□□ -1.57
SF3B3-214ENST00000572365 AGO1Q9UL18 857 aaKnown RBP5.27□□□□□ -1.57
SF3B3-214ENST00000572365 ATP6V1DQ9Y5K8 247 aa5.27□□□□□ -1.57
SF3B3-214ENST00000572365 PSAT1Q9Y617 370 aa5.27□□□□□ -1.57
SF3B3-214ENST00000572365 UBE4BO95155 1302 aa5.26□□□□□ -1.57
SF3B3-214ENST00000572365 ABCA2Q9BZC7 2435 aa5.26□□□□□ -1.57
SF3B3-214ENST00000572365 TRBV5-3A0A0A0MS03 114 aa5.26□□□□□ -1.57
SF3B3-214ENST00000572365 A8MXQ7 604 aa5.26□□□□□ -1.57
SF3B3-214ENST00000572365 PPP6CO00743 305 aa5.26□□□□□ -1.57
SF3B3-214ENST00000572365 PRPF4O43172 522 aaKnown RBP eCLIP5.26□□□□□ -1.57
SF3B3-214ENST00000572365 TACC1O75410 805 aa5.26□□□□□ -1.57
SF3B3-214ENST00000572365 SEC14L2O76054 403 aa5.26□□□□□ -1.57
SF3B3-214ENST00000572365 IL1AP01583 271 aa5.26□□□□□ -1.57
SF3B3-214ENST00000572365 TUBBP07437 444 aa5.26□□□□□ -1.57
SF3B3-214ENST00000572365 ZDHHC11BP0C7U3 371 aa5.26□□□□□ -1.57
SF3B3-214ENST00000572365 LIPCP11150 499 aa5.26□□□□□ -1.57
SF3B3-214ENST00000572365 CCL4P13236 92 aa5.26□□□□□ -1.57
SF3B3-214ENST00000572365 LIFP15018 202 aa5.26□□□□□ -1.57
SF3B3-214ENST00000572365 WARSP23381 471 aaKnown RBP5.26□□□□□ -1.57
SF3B3-214ENST00000572365 ATP5F1P24539 256 aaPredicted RBP5.26□□□□□ -1.57
SF3B3-214ENST00000572365 ADORA2BP29275 332 aa5.26□□□□□ -1.57
SF3B3-214ENST00000572365 FMO4P31512 558 aa5.26□□□□□ -1.57
SF3B3-214ENST00000572365 BSGP35613 385 aa5.26□□□□□ -1.57
SF3B3-214ENST00000572365 CPOXP36551 454 aa5.26□□□□□ -1.57
SF3B3-214ENST00000572365 ZNF132P52740 706 aa5.26□□□□□ -1.57
SF3B3-214ENST00000572365 CLNS1AP54105 237 aaKnown RBP5.26□□□□□ -1.57
SF3B3-214ENST00000572365 SLC12A3P55017 1021 aa5.26□□□□□ -1.57
SF3B3-214ENST00000572365 NAP1L1P55209 391 aaKnown RBP5.26□□□□□ -1.57
SF3B3-214ENST00000572365 EVCP57679 992 aa5.26□□□□□ -1.57
SF3B3-214ENST00000572365 RPS3AP61247 264 aaKnown RBP5.26□□□□□ -1.57
SF3B3-214ENST00000572365 RPL7AP62424 266 aaKnown RBP5.26□□□□□ -1.57
SF3B3-214ENST00000572365 PMPCAQ10713 525 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms