RNA–Protein interactions for RNA: ENST00000571018.5

TVP23B-204, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-204ENST00000571018 RAB10P61026 200 aa12.08□□□□□ -0.48
TVP23B-204ENST00000571018 RPS15AP62244 130 aaKnown RBP12.08□□□□□ -0.48
TVP23B-204ENST00000571018 TSNQ15631 228 aaKnown RBP12.08□□□□□ -0.48
TVP23B-204ENST00000571018 GARNL3Q5VVW2 1013 aa12.08□□□□□ -0.48
TVP23B-204ENST00000571018 RAB43Q86YS6 212 aa12.08□□□□□ -0.48
TVP23B-204ENST00000571018 PLD3Q8IV08 490 aa12.08□□□□□ -0.48
TVP23B-204ENST00000571018 ARHGEF39Q8N4T4 335 aa12.08□□□□□ -0.48
TVP23B-204ENST00000571018 ANKK1Q8NFD2 765 aa12.08□□□□□ -0.48
TVP23B-204ENST00000571018 ABHD11Q8NFV4 315 aa12.08□□□□□ -0.48
TVP23B-204ENST00000571018 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.08□□□□□ -0.48
TVP23B-204ENST00000571018 IFT81Q8WYA0 676 aa12.08□□□□□ -0.48
TVP23B-204ENST00000571018 WNT2BQ93097 391 aa12.08□□□□□ -0.48
TVP23B-204ENST00000571018 PTERQ96BW5 349 aa12.08□□□□□ -0.48
TVP23B-204ENST00000571018 THAP11Q96EK4 314 aa12.08□□□□□ -0.48
TVP23B-204ENST00000571018 MVB12AQ96EY5 273 aa12.08□□□□□ -0.48
TVP23B-204ENST00000571018 ABHD17AQ96GS6 310 aa12.08□□□□□ -0.48
TVP23B-204ENST00000571018 UBXN10Q96LJ8 280 aa12.08□□□□□ -0.48
TVP23B-204ENST00000571018 C10orf90Q96M02 699 aa12.08□□□□□ -0.48
TVP23B-204ENST00000571018 OR4K3Q96R72 315 aa12.08□□□□□ -0.48
TVP23B-204ENST00000571018 WDR54Q9H977 334 aa12.08□□□□□ -0.48
TVP23B-204ENST00000571018 ZNF304Q9HCX3 659 aa12.08□□□□□ -0.48
TVP23B-204ENST00000571018 NINJ2Q9NZG7 142 aa12.08□□□□□ -0.48
TVP23B-204ENST00000571018 CDC14AQ9UNH5 594 aa12.08□□□□□ -0.48
TVP23B-204ENST00000571018 ARGFXA6NJG6 315 aa12.07□□□□□ -0.48
TVP23B-204ENST00000571018 RFPL1O75677 317 aa12.07□□□□□ -0.48
TVP23B-204ENST00000571018 CCDC166P0CW27 439 aa12.07□□□□□ -0.48
TVP23B-204ENST00000571018 CDH1P12830 882 aa12.07□□□□□ -0.48
TVP23B-204ENST00000571018 PHBP35232 272 aa12.07□□□□□ -0.48
TVP23B-204ENST00000571018 HNMTP50135 292 aa12.07□□□□□ -0.48
TVP23B-204ENST00000571018 ATP6V0D1P61421 351 aa12.07□□□□□ -0.48
TVP23B-204ENST00000571018 NFATC3Q12968 1075 aa12.07□□□□□ -0.48
TVP23B-204ENST00000571018 EFTUD2Q15029 972 aaKnown RBP eCLIP12.07□□□□□ -0.48
TVP23B-204ENST00000571018 NKG7Q16617 165 aa12.07□□□□□ -0.48
TVP23B-204ENST00000571018 HKDC1Q2TB90 917 aa12.07□□□□□ -0.48
TVP23B-204ENST00000571018 VN1R4Q7Z5H5 301 aa12.07□□□□□ -0.48
TVP23B-204ENST00000571018 DTWD1Q8N5C7 304 aa12.07□□□□□ -0.48
TVP23B-204ENST00000571018 METTL27Q8N6F8 245 aaPredicted RBP12.07□□□□□ -0.48
TVP23B-204ENST00000571018 OR4K1Q8NGD4 311 aa12.07□□□□□ -0.48
TVP23B-204ENST00000571018 C9orf43Q8TAL5 461 aaPredicted RBP12.07□□□□□ -0.48
TVP23B-204ENST00000571018 NACC2Q96BF6 587 aa12.07□□□□□ -0.48
TVP23B-204ENST00000571018 CABS1Q96KC9 395 aa12.07□□□□□ -0.48
TVP23B-204ENST00000571018 IP6K3Q96PC2 410 aa12.07□□□□□ -0.48
TVP23B-204ENST00000571018 CYTH2Q99418 400 aa12.07□□□□□ -0.48
TVP23B-204ENST00000571018 FMO2Q99518 471 aa12.07□□□□□ -0.48
TVP23B-204ENST00000571018 EGFL8Q99944 293 aa12.07□□□□□ -0.48
TVP23B-204ENST00000571018 SARGQ9BW04 601 aa12.07□□□□□ -0.48
TVP23B-204ENST00000571018 FUT8Q9BYC5 575 aa12.07□□□□□ -0.48
TVP23B-204ENST00000571018 TRIM55Q9BYV6 548 aa12.07□□□□□ -0.48
TVP23B-204ENST00000571018 ING2Q9H160 280 aa12.07□□□□□ -0.48
TVP23B-204ENST00000571018 TLK1Q9UKI8 766 aa12.07□□□□□ -0.48
TVP23B-204ENST00000571018 NXT1Q9UKK6 140 aaKnown RBP12.07□□□□□ -0.48
TVP23B-204ENST00000571018 MAU2Q9Y6X3 613 aa12.07□□□□□ -0.48
TVP23B-204ENST00000571018 FER1L5A0AVI2 2057 aa12.06□□□□□ -0.48
TVP23B-204ENST00000571018 VSTM2BA6NLU5 285 aa12.06□□□□□ -0.48
TVP23B-204ENST00000571018 MKRN2OSH3BPM6 223 aa12.06□□□□□ -0.48
TVP23B-204ENST00000571018 P2RX6O15547 441 aa12.06□□□□□ -0.48
TVP23B-204ENST00000571018 LCMT2O60294 686 aaKnown RBP12.06□□□□□ -0.48
TVP23B-204ENST00000571018 UMODP07911 640 aa12.06□□□□□ -0.48
TVP23B-204ENST00000571018 CD1DP15813 335 aa12.06□□□□□ -0.48
TVP23B-204ENST00000571018 OTX2P32243 289 aa12.06□□□□□ -0.48
TVP23B-204ENST00000571018 GRK3P35626 688 aa12.06□□□□□ -0.48
TVP23B-204ENST00000571018 CCR8P51685 355 aa12.06□□□□□ -0.48
TVP23B-204ENST00000571018 FOXL2P58012 376 aa12.06□□□□□ -0.48
TVP23B-204ENST00000571018 FAM53BQ14153 422 aa12.06□□□□□ -0.48
TVP23B-204ENST00000571018 CSHL1Q14406 222 aa12.06□□□□□ -0.48
TVP23B-204ENST00000571018 TGFBIQ15582 683 aa12.06□□□□□ -0.48
TVP23B-204ENST00000571018 FRA10AC1Q70Z53 315 aa12.06□□□□□ -0.48
TVP23B-204ENST00000571018 MED25Q71SY5 747 aa12.06□□□□□ -0.48
TVP23B-204ENST00000571018 THOC6Q86W42 341 aaKnown RBP12.06□□□□□ -0.48
TVP23B-204ENST00000571018 TMEM151BQ8IW70 566 aa12.06□□□□□ -0.48
TVP23B-204ENST00000571018 SPATA6LQ8N4H0 392 aa12.06□□□□□ -0.48
TVP23B-204ENST00000571018 TMEM102Q8N9M5 508 aaPredicted RBP12.06□□□□□ -0.48
TVP23B-204ENST00000571018 NEIL2Q969S2 332 aa12.06□□□□□ -0.48
TVP23B-204ENST00000571018 COL26A1Q96A83 441 aa12.06□□□□□ -0.48
TVP23B-204ENST00000571018 RHBDF1Q96CC6 855 aa12.06□□□□□ -0.48
TVP23B-204ENST00000571018 TM4SF19Q96DZ7 209 aa12.06□□□□□ -0.48
TVP23B-204ENST00000571018 SPSB2Q99619 263 aa12.06□□□□□ -0.48
TVP23B-204ENST00000571018 REPIN1Q9BWE0 567 aaKnown RBP12.06□□□□□ -0.48
TVP23B-204ENST00000571018 UNKQ9C0B0 810 aaKnown RBP12.06□□□□□ -0.48
TVP23B-204ENST00000571018 CDC42EP4Q9H3Q1 356 aaKnown RBP12.06□□□□□ -0.48
TVP23B-204ENST00000571018 ACSS3Q9H6R3 686 aa12.06□□□□□ -0.48
TVP23B-204ENST00000571018 ACSS2Q9NR19 701 aa12.06□□□□□ -0.48
TVP23B-204ENST00000571018 CTSFQ9UBX1 484 aa12.06□□□□□ -0.48
TVP23B-204ENST00000571018 SLC22A14Q9Y267 594 aa12.06□□□□□ -0.48
TVP23B-204ENST00000571018 IGLV3-12A0A075B6K2 115 aa12.05□□□□□ -0.48
TVP23B-204ENST00000571018 FEZF1A0PJY2 475 aa12.05□□□□□ -0.48
TVP23B-204ENST00000571018 PRPF4O43172 522 aaKnown RBP eCLIP12.05□□□□□ -0.48
TVP23B-204ENST00000571018 FOXS1O43638 330 aa12.05□□□□□ -0.48
TVP23B-204ENST00000571018 DNAJB5O75953 348 aa12.05□□□□□ -0.48
TVP23B-204ENST00000571018 SLC35E2BP0CK96 405 aa12.05□□□□□ -0.48
TVP23B-204ENST00000571018 MMP11P24347 488 aa12.05□□□□□ -0.48
TVP23B-204ENST00000571018 CRABP2P29373 138 aa12.05□□□□□ -0.48
TVP23B-204ENST00000571018 SLC26A3P40879 764 aa12.05□□□□□ -0.48
TVP23B-204ENST00000571018 BCL6P41182 706 aa12.05□□□□□ -0.48
TVP23B-204ENST00000571018 CSRP3P50461 194 aa12.05□□□□□ -0.48
TVP23B-204ENST00000571018 RRADP55042 308 aa12.05□□□□□ -0.48
TVP23B-204ENST00000571018 CHAF1BQ13112 559 aa12.05□□□□□ -0.48
TVP23B-204ENST00000571018 ATP1A4Q13733 1029 aa12.05□□□□□ -0.48
TVP23B-204ENST00000571018 SLMAPQ14BN4 828 aa12.05□□□□□ -0.48
TVP23B-204ENST00000571018 NDUFA9Q16795 377 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms