RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 PAQR7Q86WK9 346 aa14.81□□□□□ -0.04
HERPUD1-219ENST00000570273 PLD3Q8IV08 490 aa14.81□□□□□ -0.04
HERPUD1-219ENST00000570273 TBC1D19Q8N5T2 526 aa14.81□□□□□ -0.04
HERPUD1-219ENST00000570273 ZNF740Q8NDX6 193 aa14.81□□□□□ -0.04
HERPUD1-219ENST00000570273 RHBDD1Q8TEB9 315 aa14.81□□□□□ -0.04
HERPUD1-219ENST00000570273 MTFMTQ96DP5 389 aaKnown RBP14.81□□□□□ -0.04
HERPUD1-219ENST00000570273 ZDHHC12Q96GR4 267 aa14.81□□□□□ -0.04
HERPUD1-219ENST00000570273 TGM7Q96PF1 710 aa14.81□□□□□ -0.04
HERPUD1-219ENST00000570273 HBEGFQ99075 208 aa14.81□□□□□ -0.04
HERPUD1-219ENST00000570273 CCDC3Q9BQI4 270 aa14.81□□□□□ -0.04
HERPUD1-219ENST00000570273 PLCD4Q9BRC7 762 aa14.81□□□□□ -0.04
HERPUD1-219ENST00000570273 KLHL25Q9H0H3 589 aa14.81□□□□□ -0.04
HERPUD1-219ENST00000570273 TUBB1Q9H4B7 451 aa14.81□□□□□ -0.04
HERPUD1-219ENST00000570273 SYNDIG1Q9H7V2 258 aa14.81□□□□□ -0.04
HERPUD1-219ENST00000570273 MEAF6Q9HAF1 191 aa14.81□□□□□ -0.04
HERPUD1-219ENST00000570273 ANKMY1Q9P2S6 941 aa14.81□□□□□ -0.04
HERPUD1-219ENST00000570273 ZNF490Q9ULM2 529 aaPredicted RBP14.81□□□□□ -0.04
HERPUD1-219ENST00000570273 PCDHGA11Q9Y5H2 935 aa14.81□□□□□ -0.04
HERPUD1-219ENST00000570273 GOLGA8QA0A0J9YX86 632 aa14.8□□□□□ -0.04
HERPUD1-219ENST00000570273 FEZF1A0PJY2 475 aa14.8□□□□□ -0.04
HERPUD1-219ENST00000570273 GOLGA8OA6NCC3 632 aa14.8□□□□□ -0.04
HERPUD1-219ENST00000570273 GOLGA8NF8WBI6 632 aa14.8□□□□□ -0.04
HERPUD1-219ENST00000570273 SDHDO14521 159 aa14.8□□□□□ -0.04
HERPUD1-219ENST00000570273 NRP2O60462 931 aa14.8□□□□□ -0.04
HERPUD1-219ENST00000570273 PDYNP01213 254 aa14.8□□□□□ -0.04
HERPUD1-219ENST00000570273 LINC00032P0C843 101 aa14.8□□□□□ -0.04
HERPUD1-219ENST00000570273 CD59P13987 128 aa14.8□□□□□ -0.04
HERPUD1-219ENST00000570273 CSF2RBP32927 897 aa14.8□□□□□ -0.04
HERPUD1-219ENST00000570273 IDH3AP50213 366 aa14.8□□□□□ -0.04
HERPUD1-219ENST00000570273 NEK2P51955 445 aa14.8□□□□□ -0.04
HERPUD1-219ENST00000570273 PHEXP78562 749 aa14.8□□□□□ -0.04
HERPUD1-219ENST00000570273 ABRAXAS2Q15018 415 aa14.8□□□□□ -0.04
HERPUD1-219ENST00000570273 FIGLAQ6QHK4 219 aa14.8□□□□□ -0.04
HERPUD1-219ENST00000570273 EPGNQ6UW88 154 aa14.8□□□□□ -0.04
HERPUD1-219ENST00000570273 TMIGD1Q6UXZ0 262 aa14.8□□□□□ -0.04
HERPUD1-219ENST00000570273 DBX2Q6ZNG2 339 aa14.8□□□□□ -0.04
HERPUD1-219ENST00000570273 ACAD11Q709F0 780 aa14.8□□□□□ -0.04
HERPUD1-219ENST00000570273 NAXDQ8IW45 347 aa14.8□□□□□ -0.04
HERPUD1-219ENST00000570273 LAS2Q8IYD9 372 aa14.8□□□□□ -0.04
HERPUD1-219ENST00000570273 OR7G3Q8NG95 312 aa14.8□□□□□ -0.04
HERPUD1-219ENST00000570273 OR4K1Q8NGD4 311 aa14.8□□□□□ -0.04
HERPUD1-219ENST00000570273 USP7Q93009 1102 aa14.8□□□□□ -0.04
HERPUD1-219ENST00000570273 FAM122AQ96E09 287 aa14.8□□□□□ -0.04
HERPUD1-219ENST00000570273 CD180Q99467 661 aa14.8□□□□□ -0.04
HERPUD1-219ENST00000570273 EBF4Q9BQW3 602 aa14.8□□□□□ -0.04
HERPUD1-219ENST00000570273 PITHD1Q9GZP4 211 aaPredicted RBP14.8□□□□□ -0.04
HERPUD1-219ENST00000570273 RAB33BQ9H082 229 aa14.8□□□□□ -0.04
HERPUD1-219ENST00000570273 SEMA6CQ9H3T2 930 aa14.8□□□□□ -0.04
HERPUD1-219ENST00000570273 KCNK13Q9HB14 408 aa14.8□□□□□ -0.04
HERPUD1-219ENST00000570273 FARSBQ9NSD9 589 aaKnown RBP14.8□□□□□ -0.04
HERPUD1-219ENST00000570273 EPHA6Q9UF33 1036 aa14.8□□□□□ -0.04
HERPUD1-219ENST00000570273 KLHL3Q9UH77 587 aa14.8□□□□□ -0.04
HERPUD1-219ENST00000570273 APOBEC2Q9Y235 224 aaKnown RBP14.8□□□□□ -0.04
HERPUD1-219ENST00000570273 ARID1BQ8NFD5 2236 aaPredicted RBP14.8□□□□□ -0.04
HERPUD1-219ENST00000570273 RIF1Q5UIP0 2472 aaKnown RBP14.8□□□□□ -0.04
HERPUD1-219ENST00000570273 CFAP54Q96N23 3096 aa14.8□□□□□ -0.04
HERPUD1-219ENST00000570273 DMXL1Q9Y485 3027 aa14.79□□□□□ -0.04
HERPUD1-219ENST00000570273 TRBC2A0A5B9 178 aa14.79□□□□□ -0.04
HERPUD1-219ENST00000570273 OR2A25A4D2G3 310 aa14.79□□□□□ -0.04
HERPUD1-219ENST00000570273 TLCD2A6NGC4 264 aa14.79□□□□□ -0.04
HERPUD1-219ENST00000570273 C4orf47A7E2U8 309 aa14.79□□□□□ -0.04
HERPUD1-219ENST00000570273 OR1F1O43749 312 aa14.79□□□□□ -0.04
HERPUD1-219ENST00000570273 SH3BP5O60239 455 aa14.79□□□□□ -0.04
HERPUD1-219ENST00000570273 FOXD2O60548 495 aaPredicted RBP14.79□□□□□ -0.04
HERPUD1-219ENST00000570273 RPLP0P05388 317 aaKnown RBP14.79□□□□□ -0.04
HERPUD1-219ENST00000570273 CD1CP29017 333 aa14.79□□□□□ -0.04
HERPUD1-219ENST00000570273 EPHA3P29320 983 aa14.79□□□□□ -0.04
HERPUD1-219ENST00000570273 BCL6P41182 706 aa14.79□□□□□ -0.04
HERPUD1-219ENST00000570273 CYP4F3Q08477 520 aa14.79□□□□□ -0.04
HERPUD1-219ENST00000570273 IMPG1Q17R60 797 aa14.79□□□□□ -0.04
HERPUD1-219ENST00000570273 XKR7Q5GH72 579 aa14.79□□□□□ -0.04
HERPUD1-219ENST00000570273 C10orf62Q5T681 223 aaPredicted RBP14.79□□□□□ -0.04
HERPUD1-219ENST00000570273 NXNQ6DKJ4 435 aa14.79□□□□□ -0.04
HERPUD1-219ENST00000570273 FCRL6Q6DN72 434 aa14.79□□□□□ -0.04
HERPUD1-219ENST00000570273 ADNP2Q6IQ32 1131 aa14.79□□□□□ -0.04
HERPUD1-219ENST00000570273 RNF165Q6ZSG1 346 aa14.79□□□□□ -0.04
HERPUD1-219ENST00000570273 PLXDC1Q8IUK5 500 aa14.79□□□□□ -0.04
HERPUD1-219ENST00000570273 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.79□□□□□ -0.042e-6■□□□□ 9.2
HERPUD1-219ENST00000570273 C19orf47Q8N9M1 422 aaKnown RBP14.79□□□□□ -0.04
HERPUD1-219ENST00000570273 CCDC197Q8NCU1 140 aa14.79□□□□□ -0.04
HERPUD1-219ENST00000570273 WDR20Q8TBZ3 569 aa14.79□□□□□ -0.04
HERPUD1-219ENST00000570273 RILPQ96NA2 401 aa14.79□□□□□ -0.04
HERPUD1-219ENST00000570273 MAP3K3Q99759 626 aa14.79□□□□□ -0.04
HERPUD1-219ENST00000570273 CCT7Q99832 543 aa14.79□□□□□ -0.04
HERPUD1-219ENST00000570273 WDR55Q9H6Y2 383 aaPredicted RBP14.79□□□□□ -0.04
HERPUD1-219ENST00000570273 NT5DC2Q9H857 520 aa14.79□□□□□ -0.04
HERPUD1-219ENST00000570273 RIC8BQ9NVN3 520 aa14.79□□□□□ -0.04
HERPUD1-219ENST00000570273 ARL2BPQ9Y2Y0 163 aa14.79□□□□□ -0.04
HERPUD1-219ENST00000570273 RALGAPA1Q6GYQ0 2036 aa14.79□□□□□ -0.04
HERPUD1-219ENST00000570273 GOLGA4Q13439 2230 aaKnown RBP14.79□□□□□ -0.04
HERPUD1-219ENST00000570273 MN1Q10571 1320 aaPredicted RBP14.78□□□□□ -0.04
HERPUD1-219ENST00000570273 ATP6AP2A0A1C7CYW4 349 aa14.78□□□□□ -0.04
HERPUD1-219ENST00000570273 SLC28A1O00337 649 aa14.78□□□□□ -0.04
HERPUD1-219ENST00000570273 TNFSF14O43557 240 aa14.78□□□□□ -0.04
HERPUD1-219ENST00000570273 ATP6AP2O75787 350 aa14.78□□□□□ -0.04
HERPUD1-219ENST00000570273 RASSF9O75901 435 aa14.78□□□□□ -0.04
HERPUD1-219ENST00000570273 HOXB3P14651 431 aaPredicted RBP14.78□□□□□ -0.04
HERPUD1-219ENST00000570273 EZRP15311 586 aaKnown RBP14.78□□□□□ -0.04
HERPUD1-219ENST00000570273 ST6GAL1P15907 406 aa14.78□□□□□ -0.04
HERPUD1-219ENST00000570273 CKMT2P17540 419 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms