RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 TTC41PQ6P2S7 1318 aa4.46□□□□□ -1.69
CHD9-220ENST00000569794 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.46□□□□□ -1.7
CHD9-220ENST00000569794 CPED1A4D0V7 1026 aa4.46□□□□□ -1.7
CHD9-220ENST00000569794 CBY3A6NI87 242 aa4.46□□□□□ -1.7
CHD9-220ENST00000569794 KBTBD13C9JR72 458 aa4.46□□□□□ -1.7
CHD9-220ENST00000569794 KLRF2D3W0D1 207 aa4.46□□□□□ -1.7
CHD9-220ENST00000569794 E9PBE3 544 aa4.46□□□□□ -1.7
CHD9-220ENST00000569794 M0QX08 132 aa4.46□□□□□ -1.7
CHD9-220ENST00000569794 PRAMEF11O60813 436 aa4.46□□□□□ -1.7
CHD9-220ENST00000569794 ATP2C2O75185 946 aa4.46□□□□□ -1.7
CHD9-220ENST00000569794 DAB1O75553 588 aa4.46□□□□□ -1.7
CHD9-220ENST00000569794 GLCEO94923 617 aa4.46□□□□□ -1.7
CHD9-220ENST00000569794 KRT6BP04259 564 aa4.46□□□□□ -1.7
CHD9-220ENST00000569794 ATP1A1P05023 1023 aaKnown RBP4.46□□□□□ -1.7
CHD9-220ENST00000569794 TPM1P09493 284 aa4.46□□□□□ -1.7
CHD9-220ENST00000569794 CYP11B2P19099 503 aa4.46□□□□□ -1.7
CHD9-220ENST00000569794 CYP2A7P20853 494 aa4.46□□□□□ -1.7
CHD9-220ENST00000569794 PKLRP30613 574 aa4.46□□□□□ -1.7
CHD9-220ENST00000569794 PRCPP42785 496 aa4.46□□□□□ -1.7
CHD9-220ENST00000569794 KRT6CP48668 564 aa4.46□□□□□ -1.7
CHD9-220ENST00000569794 HNRNPFP52597 415 aaKnown RBP4.46□□□□□ -1.7
CHD9-220ENST00000569794 MRPS34P82930 218 aaKnown RBP4.46□□□□□ -1.7
CHD9-220ENST00000569794 FOLH1Q04609 750 aa4.46□□□□□ -1.7
CHD9-220ENST00000569794 ABRQ12979 859 aa4.46□□□□□ -1.7
CHD9-220ENST00000569794 SNTB2Q13425 540 aaKnown RBP4.46□□□□□ -1.7
CHD9-220ENST00000569794 CCDC57Q2TAC2 916 aa4.46□□□□□ -1.7
CHD9-220ENST00000569794 NADK2Q4G0N4 442 aa4.46□□□□□ -1.7
CHD9-220ENST00000569794 EPC2Q52LR7 807 aa4.46□□□□□ -1.7
CHD9-220ENST00000569794 DCAF6Q58WW2 860 aa4.46□□□□□ -1.7
CHD9-220ENST00000569794 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.46□□□□□ -1.7
CHD9-220ENST00000569794 HIST2H2BDQ6DRA6 164 aa4.46□□□□□ -1.7
CHD9-220ENST00000569794 PMF1Q6P1K2 205 aa4.46□□□□□ -1.7
CHD9-220ENST00000569794 FBXO46Q6PJ61 603 aaPredicted RBP4.46□□□□□ -1.7
CHD9-220ENST00000569794 CES3Q6UWW8 571 aa4.46□□□□□ -1.7
CHD9-220ENST00000569794 ARSKQ6UWY0 536 aa4.46□□□□□ -1.7
CHD9-220ENST00000569794 SLC26A9Q7LBE3 791 aa4.46□□□□□ -1.7
CHD9-220ENST00000569794 SIAH3Q8IW03 269 aa4.46□□□□□ -1.7
CHD9-220ENST00000569794 AQP12AQ8IXF9 295 aa4.46□□□□□ -1.7
CHD9-220ENST00000569794 ZNF679Q8IYX0 411 aa4.46□□□□□ -1.7
CHD9-220ENST00000569794 BBS5Q8N3I7 341 aa4.46□□□□□ -1.7
CHD9-220ENST00000569794 EIF1ADQ8N9N8 165 aaKnown RBP4.46□□□□□ -1.7
CHD9-220ENST00000569794 L3MBTL4Q8NA19 623 aa4.46□□□□□ -1.7
CHD9-220ENST00000569794 LEMD2Q8NC56 503 aa4.46□□□□□ -1.7
CHD9-220ENST00000569794 TMEM185AQ8NFB2 350 aa4.46□□□□□ -1.7
CHD9-220ENST00000569794 RAD54LQ92698 747 aa4.46□□□□□ -1.7
CHD9-220ENST00000569794 RIT1Q92963 219 aa4.46□□□□□ -1.7
CHD9-220ENST00000569794 ANKRD9Q96BM1 317 aaPredicted RBP4.46□□□□□ -1.7
CHD9-220ENST00000569794 ERLEC1Q96DZ1 483 aa4.46□□□□□ -1.7
CHD9-220ENST00000569794 STAMBPL1Q96FJ0 436 aa4.46□□□□□ -1.7
CHD9-220ENST00000569794 MS4A10Q96PG2 267 aa4.46□□□□□ -1.7
CHD9-220ENST00000569794 RBM14Q96PK6 669 aaKnown RBP4.46□□□□□ -1.7
CHD9-220ENST00000569794 PLIN2Q99541 437 aa4.46□□□□□ -1.7
CHD9-220ENST00000569794 ZBTB18Q99592 522 aa4.46□□□□□ -1.7
CHD9-220ENST00000569794 ASCL2Q99929 193 aa4.46□□□□□ -1.7
CHD9-220ENST00000569794 ZNF577Q9BSK1 485 aa4.46□□□□□ -1.7
CHD9-220ENST00000569794 ZSCAN5AQ9BUG6 496 aa4.46□□□□□ -1.7
CHD9-220ENST00000569794 RBM4Q9BWF3 364 aaKnown RBP4.46□□□□□ -1.7
CHD9-220ENST00000569794 NFKBIZQ9BYH8 718 aa4.46□□□□□ -1.7
CHD9-220ENST00000569794 POLR1EQ9GZS1 481 aaKnown RBP4.46□□□□□ -1.7
CHD9-220ENST00000569794 CARD9Q9H257 536 aa4.46□□□□□ -1.7
CHD9-220ENST00000569794 PIGMQ9H3S5 423 aa4.46□□□□□ -1.7
CHD9-220ENST00000569794 ZNF224Q9NZL3 707 aa4.46□□□□□ -1.7
CHD9-220ENST00000569794 TRIM10Q9UDY6 481 aa4.46□□□□□ -1.7
CHD9-220ENST00000569794 UBQLN2Q9UHD9 624 aa4.46□□□□□ -1.7
CHD9-220ENST00000569794 DNPEPQ9ULA0 475 aa4.46□□□□□ -1.7
CHD9-220ENST00000569794 PAM16Q9Y3D7 125 aa4.46□□□□□ -1.7
CHD9-220ENST00000569794 C15orf38-AP3S2A0A0A6YYH1 394 aa4.45□□□□□ -1.7
CHD9-220ENST00000569794 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.45□□□□□ -1.7
CHD9-220ENST00000569794 ZSCAN5BA6NJL1 495 aa4.45□□□□□ -1.7
CHD9-220ENST00000569794 L7N2F9 121 aa4.45□□□□□ -1.7
CHD9-220ENST00000569794 CLDN4O14493 209 aa4.45□□□□□ -1.7
CHD9-220ENST00000569794 PPIP5K2O43314 1243 aa4.45□□□□□ -1.7
CHD9-220ENST00000569794 GPRIN2O60269 458 aa4.45□□□□□ -1.7
CHD9-220ENST00000569794 ATP6V1G1O75348 118 aa4.45□□□□□ -1.7
CHD9-220ENST00000569794 CIB2O75838 187 aa4.45□□□□□ -1.7
CHD9-220ENST00000569794 HSPA8P11142 646 aaKnown RBP4.45□□□□□ -1.7
CHD9-220ENST00000569794 CETPP11597 493 aa4.45□□□□□ -1.7
CHD9-220ENST00000569794 UGT1A6P19224 532 aa4.45□□□□□ -1.7
CHD9-220ENST00000569794 FUT1P19526 365 aa4.45□□□□□ -1.7
CHD9-220ENST00000569794 GALP22466 123 aa4.45□□□□□ -1.7
CHD9-220ENST00000569794 CYP2F1P24903 491 aa4.45□□□□□ -1.7
CHD9-220ENST00000569794 MARK3P27448 753 aa4.45□□□□□ -1.7
CHD9-220ENST00000569794 PSMB4P28070 264 aa4.45□□□□□ -1.7
CHD9-220ENST00000569794 HOXD10P28358 340 aa4.45□□□□□ -1.7
CHD9-220ENST00000569794 CORO1AP31146 461 aaKnown RBP4.45□□□□□ -1.7
CHD9-220ENST00000569794 TIA1P31483 386 aaKnown RBP eCLIP4.45□□□□□ -1.7
CHD9-220ENST00000569794 GABRA5P31644 462 aa4.45□□□□□ -1.7
CHD9-220ENST00000569794 SHMT1P34896 483 aa4.45□□□□□ -1.7
CHD9-220ENST00000569794 ETV1P50549 477 aa4.45□□□□□ -1.7
CHD9-220ENST00000569794 SPIBQ01892 262 aa4.45□□□□□ -1.7
CHD9-220ENST00000569794 NAE1Q13564 534 aa4.45□□□□□ -1.7
CHD9-220ENST00000569794 PNLIPRP3Q17RR3 467 aa4.45□□□□□ -1.7
CHD9-220ENST00000569794 KRT24Q2M2I5 525 aa4.45□□□□□ -1.7
CHD9-220ENST00000569794 LBHQ53QV2 105 aaPredicted RBP4.45□□□□□ -1.7
CHD9-220ENST00000569794 TXNRD3NBQ6F5E7 133 aa4.45□□□□□ -1.7
CHD9-220ENST00000569794 ENPP7Q6UWV6 458 aa4.45□□□□□ -1.7
CHD9-220ENST00000569794 TSPAN33Q86UF1 283 aa4.45□□□□□ -1.7
CHD9-220ENST00000569794 NOXA1Q86UR1 476 aa4.45□□□□□ -1.7
CHD9-220ENST00000569794 PDCL2Q8N4E4 241 aa4.45□□□□□ -1.7
CHD9-220ENST00000569794 FAM133AQ8N9E0 248 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms