RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 H0Y3Z8 333 aa10.51□□□□□ -0.73
PDXDC1-216ENST00000569715 TBX6O95947 436 aaPredicted RBP10.51□□□□□ -0.73
PDXDC1-216ENST00000569715 HOXB3P14651 431 aaPredicted RBP10.51□□□□□ -0.73
PDXDC1-216ENST00000569715 XRCC1P18887 633 aaPredicted RBP10.51□□□□□ -0.73
PDXDC1-216ENST00000569715 TCN1P20061 433 aaPredicted RBP10.51□□□□□ -0.73
PDXDC1-216ENST00000569715 HNRNPH1P31943 449 aaKnown RBP10.51□□□□□ -0.73
PDXDC1-216ENST00000569715 TMIGD1Q6UXZ0 262 aa10.51□□□□□ -0.73
PDXDC1-216ENST00000569715 TMEFF1Q8IYR6 380 aa10.51□□□□□ -0.73
PDXDC1-216ENST00000569715 GJD3Q8N144 294 aa10.51□□□□□ -0.73
PDXDC1-216ENST00000569715 RAB42Q8N4Z0 105 aa10.51□□□□□ -0.73
PDXDC1-216ENST00000569715 FBXL6Q8N531 539 aa10.51□□□□□ -0.73
PDXDC1-216ENST00000569715 CAMKK1Q8N5S9 505 aa10.51□□□□□ -0.73
PDXDC1-216ENST00000569715 CXorf40BQ96DE9 158 aa10.51□□□□□ -0.73
PDXDC1-216ENST00000569715 NDE1Q9NXR1 346 aa10.51□□□□□ -0.73
PDXDC1-216ENST00000569715 CROTQ9UKG9 612 aa10.51□□□□□ -0.73
PDXDC1-216ENST00000569715 PPT2Q9UMR5 302 aa10.51□□□□□ -0.73
PDXDC1-216ENST00000569715 A0A1W2PR77 199 aa10.51□□□□□ -0.73
PDXDC1-216ENST00000569715 KRT36O76013 467 aa10.51□□□□□ -0.73
PDXDC1-216ENST00000569715 HSD3B1P14060 373 aa10.51□□□□□ -0.73
PDXDC1-216ENST00000569715 HSD3B2P26439 372 aa10.51□□□□□ -0.73
PDXDC1-216ENST00000569715 SLC7A2P52569 658 aa10.51□□□□□ -0.73
PDXDC1-216ENST00000569715 GTF2A1P52655 376 aaPredicted RBP10.51□□□□□ -0.73
PDXDC1-216ENST00000569715 ZNF33BQ06732 778 aa10.51□□□□□ -0.73
PDXDC1-216ENST00000569715 MDC1Q14676 2089 aaKnown RBP10.51□□□□□ -0.73
PDXDC1-216ENST00000569715 RBBP5Q15291 538 aaKnown RBP10.51□□□□□ -0.73
PDXDC1-216ENST00000569715 CWF19L1Q69YN2 538 aaKnown RBP10.51□□□□□ -0.73
PDXDC1-216ENST00000569715 HACD2Q6Y1H2 254 aa10.51□□□□□ -0.73
PDXDC1-216ENST00000569715 ARMCX6Q7L4S7 300 aa10.51□□□□□ -0.73
PDXDC1-216ENST00000569715 PARGQ86W56 976 aa10.51□□□□□ -0.73
PDXDC1-216ENST00000569715 ABHD11Q8NFV4 315 aa10.51□□□□□ -0.73
PDXDC1-216ENST00000569715 REPS1Q96D71 796 aa10.51□□□□□ -0.73
PDXDC1-216ENST00000569715 GPATCH1Q9BRR8 931 aaKnown RBP10.51□□□□□ -0.73
PDXDC1-216ENST00000569715 CLMPQ9H6B4 373 aa10.51□□□□□ -0.73
PDXDC1-216ENST00000569715 SLC6A20Q9NP91 592 aa10.51□□□□□ -0.73
PDXDC1-216ENST00000569715 KLHL20Q9Y2M5 609 aa10.51□□□□□ -0.73
PDXDC1-216ENST00000569715 COLEC10Q9Y6Z7 277 aa10.51□□□□□ -0.73
PDXDC1-216ENST00000569715 BDP1A6H8Y1 2624 aa10.51□□□□□ -0.73
PDXDC1-216ENST00000569715 PRICKLE3O43900 615 aaPredicted RBP10.5□□□□□ -0.73
PDXDC1-216ENST00000569715 NUDT1P36639 197 aa10.5□□□□□ -0.73
PDXDC1-216ENST00000569715 CCR8P51685 355 aa10.5□□□□□ -0.73
PDXDC1-216ENST00000569715 ATXN3P54252 364 aaPredicted RBP10.5□□□□□ -0.73
PDXDC1-216ENST00000569715 REEP5Q00765 189 aa10.5□□□□□ -0.73
PDXDC1-216ENST00000569715 ACSM2AQ08AH3 577 aa10.5□□□□□ -0.73
PDXDC1-216ENST00000569715 HIST2H2ACQ16777 129 aaPredicted RBP10.5□□□□□ -0.73
PDXDC1-216ENST00000569715 PRRT3Q5FWE3 981 aa10.5□□□□□ -0.73
PDXDC1-216ENST00000569715 ACSM2BQ68CK6 577 aa10.5□□□□□ -0.73
PDXDC1-216ENST00000569715 HIST2H2AA3Q6FI13 130 aa10.5□□□□□ -0.73
PDXDC1-216ENST00000569715 PCYOX1LQ8NBM8 494 aa10.5□□□□□ -0.73
PDXDC1-216ENST00000569715 CDC26Q8NHZ8 85 aa10.5□□□□□ -0.73
PDXDC1-216ENST00000569715 TSPEARQ8WU66 669 aa10.5□□□□□ -0.73
PDXDC1-216ENST00000569715 LCN9Q8WX39 176 aa10.5□□□□□ -0.73
PDXDC1-216ENST00000569715 ROPN1LQ96C74 230 aa10.5□□□□□ -0.73
PDXDC1-216ENST00000569715 LRRC61Q9BV99 259 aa10.5□□□□□ -0.73
PDXDC1-216ENST00000569715 RAB11FIP5Q9BXF6 653 aa10.5□□□□□ -0.73
PDXDC1-216ENST00000569715 PCBD2Q9H0N5 130 aa10.5□□□□□ -0.73
PDXDC1-216ENST00000569715 PELI2Q9HAT8 420 aa10.5□□□□□ -0.73
PDXDC1-216ENST00000569715 DLGAP2Q9P1A6 1054 aa10.5□□□□□ -0.73
PDXDC1-216ENST00000569715 TMED5Q9Y3A6 229 aa10.5□□□□□ -0.73
PDXDC1-216ENST00000569715 THADAQ6YHU6 1953 aa10.5□□□□□ -0.73
PDXDC1-216ENST00000569715 MAP3K7O43318 606 aa10.5□□□□□ -0.73
PDXDC1-216ENST00000569715 AKAP10O43572 662 aa10.5□□□□□ -0.73
PDXDC1-216ENST00000569715 GBAP04062 536 aa10.5□□□□□ -0.73
PDXDC1-216ENST00000569715 ACTR3P61158 418 aa10.5□□□□□ -0.73
PDXDC1-216ENST00000569715 PHC1P78364 1004 aa10.5□□□□□ -0.73
PDXDC1-216ENST00000569715 CSNK1G2P78368 415 aa10.5□□□□□ -0.73
PDXDC1-216ENST00000569715 PRDX1Q06830 199 aaKnown RBP10.5□□□□□ -0.73
PDXDC1-216ENST00000569715 LAPTM5Q13571 262 aa10.5□□□□□ -0.73
PDXDC1-216ENST00000569715 NFYCQ13952 458 aa10.5□□□□□ -0.73
PDXDC1-216ENST00000569715 SNCBQ16143 134 aa10.5□□□□□ -0.73
PDXDC1-216ENST00000569715 TRMT5Q32P41 509 aaKnown RBP10.5□□□□□ -0.73
PDXDC1-216ENST00000569715 IYDQ6PHW0 289 aa10.5□□□□□ -0.73
PDXDC1-216ENST00000569715 HOMEZQ8IX15 550 aa10.5□□□□□ -0.73
PDXDC1-216ENST00000569715 HIPK4Q8NE63 616 aa10.5□□□□□ -0.73
PDXDC1-216ENST00000569715 CADM4Q8NFZ8 388 aa10.5□□□□□ -0.73
PDXDC1-216ENST00000569715 LRRC58Q96CX6 371 aa10.5□□□□□ -0.73
PDXDC1-216ENST00000569715 SORBS1Q9BX66 1292 aaKnown RBP10.5□□□□□ -0.73
PDXDC1-216ENST00000569715 APOBEC3BQ9UH17 382 aaKnown RBP10.5□□□□□ -0.73
PDXDC1-216ENST00000569715 TECTAO75443 2155 aa10.5□□□□□ -0.73
PDXDC1-216ENST00000569715 PRORSD1PA6NEY8 169 aa10.5□□□□□ -0.73
PDXDC1-216ENST00000569715 FOXE1O00358 373 aaPredicted RBP10.5□□□□□ -0.73
PDXDC1-216ENST00000569715 BTN3A3O00478 584 aa10.5□□□□□ -0.73
PDXDC1-216ENST00000569715 STATHP02808 62 aa10.5□□□□□ -0.73
PDXDC1-216ENST00000569715 CD38P28907 300 aa10.5□□□□□ -0.73
PDXDC1-216ENST00000569715 CLDN8P56748 225 aa10.5□□□□□ -0.73
PDXDC1-216ENST00000569715 MS4A2Q01362 244 aa10.5□□□□□ -0.73
PDXDC1-216ENST00000569715 CCNIQ14094 377 aa10.5□□□□□ -0.73
PDXDC1-216ENST00000569715 GPR18Q14330 331 aa10.5□□□□□ -0.73
PDXDC1-216ENST00000569715 COQ5Q5HYK3 327 aa10.5□□□□□ -0.73
PDXDC1-216ENST00000569715 ADCK2Q7Z695 626 aa10.5□□□□□ -0.73
PDXDC1-216ENST00000569715 TAF8Q7Z7C8 310 aa10.5□□□□□ -0.73
PDXDC1-216ENST00000569715 AMIGO1Q86WK6 493 aa10.5□□□□□ -0.73
PDXDC1-216ENST00000569715 WDR48Q8TAF3 677 aa10.5□□□□□ -0.73
PDXDC1-216ENST00000569715 CHTF18Q8WVB6 975 aa10.5□□□□□ -0.73
PDXDC1-216ENST00000569715 SYNPO2LQ9H987 977 aa10.5□□□□□ -0.73
PDXDC1-216ENST00000569715 TM9SF3Q9HD45 589 aa10.5□□□□□ -0.73
PDXDC1-216ENST00000569715 SPAG4Q9NPE6 437 aa10.5□□□□□ -0.73
PDXDC1-216ENST00000569715 LEF1Q9UJU2 399 aaPredicted RBP10.5□□□□□ -0.73
PDXDC1-216ENST00000569715 NEUROG3Q9Y4Z2 214 aa10.5□□□□□ -0.73
PDXDC1-216ENST00000569715 PCDHB11Q9Y5F2 797 aa10.5□□□□□ -0.73
PDXDC1-216ENST00000569715 NME4O00746 187 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms