RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 C11orf65Q8NCR3 313 aa10.59□□□□□ -0.71
PALB2-206ENST00000568219 ZNF431Q8TF32 576 aaPredicted RBP10.59□□□□□ -0.71
PALB2-206ENST00000568219 FKBP10Q96AY3 582 aa10.59□□□□□ -0.71
PALB2-206ENST00000568219 ZFP3Q96NJ6 502 aa10.59□□□□□ -0.71
PALB2-206ENST00000568219 OR5M11Q96RB7 305 aa10.59□□□□□ -0.71
PALB2-206ENST00000568219 NMUR1Q9HB89 426 aa10.59□□□□□ -0.71
PALB2-206ENST00000568219 RGS17Q9UGC6 210 aaPredicted RBP10.59□□□□□ -0.71
PALB2-206ENST00000568219 ZFC3H1O60293 1989 aaKnown RBP10.59□□□□□ -0.71
PALB2-206ENST00000568219 USP54Q70EL1 1684 aa10.59□□□□□ -0.71
PALB2-206ENST00000568219 ARID1AO14497 2285 aa10.59□□□□□ -0.71
PALB2-206ENST00000568219 TRIP11Q15643 1979 aa10.59□□□□□ -0.71
PALB2-206ENST00000568219 CLCA1A8K7I4 914 aa10.58□□□□□ -0.71
PALB2-206ENST00000568219 NT5C1B-RDH14C9J2C7 533 aa10.58□□□□□ -0.71
PALB2-206ENST00000568219 PRAMEF1O95521 474 aa10.58□□□□□ -0.71
PALB2-206ENST00000568219 ALPIP09923 528 aa10.58□□□□□ -0.71
PALB2-206ENST00000568219 THPOP40225 353 aa10.58□□□□□ -0.71
PALB2-206ENST00000568219 HTR3AP46098 478 aa10.58□□□□□ -0.71
PALB2-206ENST00000568219 OR3A3P47888 321 aa10.58□□□□□ -0.71
PALB2-206ENST00000568219 CAV3P56539 151 aa10.58□□□□□ -0.71
PALB2-206ENST00000568219 ZMAT1Q5H9K5 638 aa10.58□□□□□ -0.71
PALB2-206ENST00000568219 FAM209AQ5JX71 171 aa10.58□□□□□ -0.71
PALB2-206ENST00000568219 PRSS36Q5K4E3 855 aa10.58□□□□□ -0.71
PALB2-206ENST00000568219 SPOUT1Q5T280 376 aaKnown RBP10.58□□□□□ -0.71
PALB2-206ENST00000568219 SYT6Q5T7P8 510 aaPredicted RBP10.58□□□□□ -0.71
PALB2-206ENST00000568219 SHQ1Q6PI26 577 aaKnown RBP10.58□□□□□ -0.71
PALB2-206ENST00000568219 DLEU7Q6UYE1 221 aa10.58□□□□□ -0.71
PALB2-206ENST00000568219 PAQR9Q6ZVX9 377 aa10.58□□□□□ -0.71
PALB2-206ENST00000568219 CLECL1Q8IZS7 167 aa10.58□□□□□ -0.71
PALB2-206ENST00000568219 ZNF548Q8NEK5 533 aaPredicted RBP10.58□□□□□ -0.71
PALB2-206ENST00000568219 OR9Q2Q8NGE9 314 aa10.58□□□□□ -0.71
PALB2-206ENST00000568219 COQ8BQ96D53 544 aa10.58□□□□□ -0.71
PALB2-206ENST00000568219 SNX18Q96RF0 628 aa10.58□□□□□ -0.71
PALB2-206ENST00000568219 GMLQ99445 158 aa10.58□□□□□ -0.71
PALB2-206ENST00000568219 TPT1P8Q9HAU6 139 aa10.58□□□□□ -0.71
PALB2-206ENST00000568219 NUDT4Q9NZJ9 180 aa10.58□□□□□ -0.71
PALB2-206ENST00000568219 ADAMDEC1O15204 470 aa10.58□□□□□ -0.72
PALB2-206ENST00000568219 AKR7A2O43488 359 aa10.58□□□□□ -0.72
PALB2-206ENST00000568219 OGNP20774 298 aaKnown RBP10.58□□□□□ -0.72
PALB2-206ENST00000568219 DCDC1P59894 354 aa10.58□□□□□ -0.72
PALB2-206ENST00000568219 RAB8AP61006 207 aa10.58□□□□□ -0.72
PALB2-206ENST00000568219 CSNK2BP67870 215 aa10.58□□□□□ -0.72
PALB2-206ENST00000568219 IFITM2Q01629 132 aa10.58□□□□□ -0.72
PALB2-206ENST00000568219 RPA4Q13156 261 aa10.58□□□□□ -0.72
PALB2-206ENST00000568219 MAB21L1Q13394 359 aa10.58□□□□□ -0.72
PALB2-206ENST00000568219 GPAT3Q53EU6 434 aa10.58□□□□□ -0.72
PALB2-206ENST00000568219 FAM180BQ6P0A1 224 aa10.58□□□□□ -0.72
PALB2-206ENST00000568219 USP45Q70EL2 814 aa10.58□□□□□ -0.72
PALB2-206ENST00000568219 UBE2R2Q712K3 238 aaPredicted RBP10.58□□□□□ -0.72
PALB2-206ENST00000568219 SERPINA9Q86WD7 417 aa10.58□□□□□ -0.72
PALB2-206ENST00000568219 ZSWIM9Q86XI8 627 aa10.58□□□□□ -0.72
PALB2-206ENST00000568219 RNF175Q8N4F7 328 aa10.58□□□□□ -0.72
PALB2-206ENST00000568219 AQP11Q8NBQ7 271 aa10.58□□□□□ -0.72
PALB2-206ENST00000568219 OR4K1Q8NGD4 311 aa10.58□□□□□ -0.72
PALB2-206ENST00000568219 TRPM4Q8TD43 1214 aa10.58□□□□□ -0.72
PALB2-206ENST00000568219 AKAP1Q92667 903 aaKnown RBP eCLIP10.58□□□□□ -0.72
PALB2-206ENST00000568219 KAT2AQ92830 837 aa10.58□□□□□ -0.72
PALB2-206ENST00000568219 ZNF382Q96SR6 550 aa10.58□□□□□ -0.72
PALB2-206ENST00000568219 DPCDQ9BVM2 203 aaPredicted RBP10.58□□□□□ -0.72
PALB2-206ENST00000568219 CACYBPQ9HB71 228 aaKnown RBP10.58□□□□□ -0.72
PALB2-206ENST00000568219 MRPL39Q9NYK5 338 aaKnown RBP10.58□□□□□ -0.72
PALB2-206ENST00000568219 C17orf102A2RUQ5 167 aa10.58□□□□□ -0.72
PALB2-206ENST00000568219 ASPDHA6ND91 283 aa10.58□□□□□ -0.72
PALB2-206ENST00000568219 AXIN1O15169 862 aa10.58□□□□□ -0.72
PALB2-206ENST00000568219 LDB2O43679 373 aa10.58□□□□□ -0.72
PALB2-206ENST00000568219 OR7A10O76100 309 aa10.58□□□□□ -0.72
PALB2-206ENST00000568219 IFNA14P01570 189 aa10.58□□□□□ -0.72
PALB2-206ENST00000568219 ZNF81P51508 661 aa10.58□□□□□ -0.72
PALB2-206ENST00000568219 CHIT1Q13231 466 aa10.58□□□□□ -0.72
PALB2-206ENST00000568219 SUZ12Q15022 739 aaKnown RBP10.58□□□□□ -0.72
PALB2-206ENST00000568219 VMACQ2NL98 169 aa10.58□□□□□ -0.72
PALB2-206ENST00000568219 SPATS1Q496A3 300 aa10.58□□□□□ -0.72
PALB2-206ENST00000568219 CTXN3Q4LDR2 81 aa10.58□□□□□ -0.72
PALB2-206ENST00000568219 NADSYN1Q6IA69 706 aa10.58□□□□□ -0.72
PALB2-206ENST00000568219 LYPD8Q6UX82 237 aa10.58□□□□□ -0.72
PALB2-206ENST00000568219 CYHR1Q6ZMK1 362 aa10.58□□□□□ -0.72
PALB2-206ENST00000568219 ADCK2Q7Z695 626 aa10.58□□□□□ -0.72
PALB2-206ENST00000568219 C8orf48Q96LL4 319 aa10.58□□□□□ -0.72
PALB2-206ENST00000568219 ANKHQ9HCJ1 492 aa10.58□□□□□ -0.72
PALB2-206ENST00000568219 ST3GAL5Q9UNP4 418 aa10.58□□□□□ -0.72
PALB2-206ENST00000568219 PCDHB5Q9Y5E4 795 aa10.58□□□□□ -0.72
PALB2-206ENST00000568219 CHURC1-FNTBB4DL54 471 aa10.58□□□□□ -0.72
PALB2-206ENST00000568219 HAS3O00219 553 aa10.58□□□□□ -0.72
PALB2-206ENST00000568219 TLX2O43763 284 aaPredicted RBP10.58□□□□□ -0.72
PALB2-206ENST00000568219 DHFRP00374 187 aa10.58□□□□□ -0.72
PALB2-206ENST00000568219 CYP2A7P20853 494 aa10.58□□□□□ -0.72
PALB2-206ENST00000568219 CSTF2P33240 577 aaKnown RBP eCLIP10.58□□□□□ -0.72
PALB2-206ENST00000568219 BMPR1AP36894 532 aa10.58□□□□□ -0.72
PALB2-206ENST00000568219 TAF10Q12962 218 aa10.58□□□□□ -0.72
PALB2-206ENST00000568219 GRIK2Q13002 908 aa10.58□□□□□ -0.72
PALB2-206ENST00000568219 CAMK2BQ13554 666 aa10.58□□□□□ -0.72
PALB2-206ENST00000568219 POU4F3Q15319 338 aa10.58□□□□□ -0.72
PALB2-206ENST00000568219 HKDC1Q2TB90 917 aa10.58□□□□□ -0.72
PALB2-206ENST00000568219 FBXO43Q4G163 708 aa10.58□□□□□ -0.72
PALB2-206ENST00000568219 OTUD1Q5VV17 481 aaPredicted RBP10.58□□□□□ -0.72
PALB2-206ENST00000568219 HDDC2Q7Z4H3 204 aa10.58□□□□□ -0.72
PALB2-206ENST00000568219 Q8N402 240 aa10.58□□□□□ -0.72
PALB2-206ENST00000568219 TCEANCQ8N8B7 351 aa10.58□□□□□ -0.72
PALB2-206ENST00000568219 TP53I13Q8NBR0 393 aaPredicted RBP10.58□□□□□ -0.72
PALB2-206ENST00000568219 ZMIZ2Q8NF64 920 aa10.58□□□□□ -0.72
PALB2-206ENST00000568219 GGHQ92820 318 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms