RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 WSCD1Q658N2 575 aa1.56□□□□□ -2.16
SMG1-212ENST00000566328 DHRS7BQ6IAN0 325 aaPredicted RBP1.56□□□□□ -2.16
SMG1-212ENST00000566328 TMEM173Q86WV6 379 aaPredicted RBP1.56□□□□□ -2.16
SMG1-212ENST00000566328 HIPK1Q86Z02 1210 aa1.56□□□□□ -2.16
SMG1-212ENST00000566328 ZMYND12Q9H0C1 365 aa1.56□□□□□ -2.16
SMG1-212ENST00000566328 TLE6Q9H808 572 aa1.56□□□□□ -2.16
SMG1-212ENST00000566328 CRYL1Q9Y2S2 319 aa1.56□□□□□ -2.16
SMG1-212ENST00000566328 AUP1Q9Y679 476 aa1.56□□□□□ -2.16
SMG1-212ENST00000566328 SPAG9O60271 1321 aaKnown RBP1.56□□□□□ -2.16
SMG1-212ENST00000566328 PLCH2O75038 1416 aa1.56□□□□□ -2.16
SMG1-212ENST00000566328 CLIP1P30622 1438 aa1.56□□□□□ -2.16
SMG1-212ENST00000566328 FANCAO15360 1455 aa1.56□□□□□ -2.16
SMG1-212ENST00000566328 DENND4BO75064 1496 aaPredicted RBP1.56□□□□□ -2.16
SMG1-212ENST00000566328 PTPRMP28827 1452 aa1.56□□□□□ -2.16
SMG1-212ENST00000566328 GOLGA3Q08378 1498 aa1.56□□□□□ -2.16
SMG1-212ENST00000566328 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.56□□□□□ -2.16
SMG1-212ENST00000566328 GLI2P10070 1586 aa1.55□□□□□ -2.16
SMG1-212ENST00000566328 KIF14Q15058 1648 aa1.55□□□□□ -2.16
SMG1-212ENST00000566328 RAPGEF6Q8TEU7 1601 aa1.55□□□□□ -2.16
SMG1-212ENST00000566328 LRRIQ1Q96JM4 1722 aa1.55□□□□□ -2.16
SMG1-212ENST00000566328 IGHV3-20A0A0C4DH32 117 aa1.55□□□□□ -2.16
SMG1-212ENST00000566328 TRBV4-1A0A0J9YWV2 114 aa1.55□□□□□ -2.16
SMG1-212ENST00000566328 TRBV5-5A0A0J9YX44 114 aa1.55□□□□□ -2.16
SMG1-212ENST00000566328 ARHGEF33A8MVX0 844 aa1.55□□□□□ -2.16
SMG1-212ENST00000566328 TLX2O43763 284 aaPredicted RBP1.55□□□□□ -2.16
SMG1-212ENST00000566328 MTRF1O75570 445 aaKnown RBP1.55□□□□□ -2.16
SMG1-212ENST00000566328 ZWINTO95229 277 aa1.55□□□□□ -2.16
SMG1-212ENST00000566328 OR2C1O95371 312 aa1.55□□□□□ -2.16
SMG1-212ENST00000566328 ACSL3O95573 720 aa1.55□□□□□ -2.16
SMG1-212ENST00000566328 PROS1P07225 676 aa1.55□□□□□ -2.16
SMG1-212ENST00000566328 TSPY4P0CV99 314 aa1.55□□□□□ -2.16
SMG1-212ENST00000566328 TSPY10P0CW01 314 aa1.55□□□□□ -2.16
SMG1-212ENST00000566328 PTPN3P26045 913 aa1.55□□□□□ -2.16
SMG1-212ENST00000566328 HSPA1LP34931 641 aa1.55□□□□□ -2.16
SMG1-212ENST00000566328 DCDC1P59894 354 aa1.55□□□□□ -2.16
SMG1-212ENST00000566328 IDI1Q13907 227 aa1.55□□□□□ -2.16
SMG1-212ENST00000566328 TSTQ16762 297 aaKnown RBP1.55□□□□□ -2.16
SMG1-212ENST00000566328 TMTC3Q6ZXV5 915 aa1.55□□□□□ -2.16
SMG1-212ENST00000566328 CHST9Q7L1S5 443 aa1.55□□□□□ -2.16
SMG1-212ENST00000566328 RPAP2Q8IXW5 612 aaPredicted RBP1.55□□□□□ -2.16
SMG1-212ENST00000566328 MMD2Q8IY49 270 aa1.55□□□□□ -2.16
SMG1-212ENST00000566328 CPXCR1Q8N123 301 aa1.55□□□□□ -2.16
SMG1-212ENST00000566328 FBXO39Q8N4B4 442 aa1.55□□□□□ -2.16
SMG1-212ENST00000566328 THAP8Q8NA92 274 aa1.55□□□□□ -2.16
SMG1-212ENST00000566328 OR4Q3Q8NH05 313 aa1.55□□□□□ -2.16
SMG1-212ENST00000566328 SCFD2Q8WU76 684 aa1.55□□□□□ -2.16
SMG1-212ENST00000566328 METTL21AQ8WXB1 218 aa1.55□□□□□ -2.16
SMG1-212ENST00000566328 PIGBQ92521 554 aa1.55□□□□□ -2.16
SMG1-212ENST00000566328 ESAMQ96AP7 390 aa1.55□□□□□ -2.16
SMG1-212ENST00000566328 NUS1Q96E22 293 aa1.55□□□□□ -2.16
SMG1-212ENST00000566328 ZNF799Q96GE5 643 aa1.55□□□□□ -2.16
SMG1-212ENST00000566328 SFXN2Q96NB2 322 aa1.55□□□□□ -2.16
SMG1-212ENST00000566328 SRSF8Q9BRL6 282 aaKnown RBP1.55□□□□□ -2.16
SMG1-212ENST00000566328 CCDC28BQ9BUN5 200 aa1.55□□□□□ -2.16
SMG1-212ENST00000566328 TBC1D17Q9HA65 648 aa1.55□□□□□ -2.16
SMG1-212ENST00000566328 CUTCQ9NTM9 273 aa1.55□□□□□ -2.16
SMG1-212ENST00000566328 IL17CQ9P0M4 197 aa1.55□□□□□ -2.16
SMG1-212ENST00000566328 PIAS3Q9Y6X2 628 aa1.55□□□□□ -2.16
SMG1-212ENST00000566328 CCNB3Q8WWL7 1395 aa1.55□□□□□ -2.16
SMG1-212ENST00000566328 ATP10AO60312 1499 aa1.55□□□□□ -2.16
SMG1-212ENST00000566328 ARAP3Q8WWN8 1544 aa1.55□□□□□ -2.16
SMG1-212ENST00000566328 GPATCH8Q9UKJ3 1502 aaKnown RBP1.55□□□□□ -2.16
SMG1-212ENST00000566328 TTC37Q6PGP7 1564 aa1.55□□□□□ -2.16
SMG1-212ENST00000566328 HECW2Q9P2P5 1572 aa1.55□□□□□ -2.16
SMG1-212ENST00000566328 CTTNBP2Q8WZ74 1663 aa1.55□□□□□ -2.16
SMG1-212ENST00000566328 UTRNP46939 3433 aa1.54□□□□□ -2.16
SMG1-212ENST00000566328 A0A1B0GTH9 108 aa1.54□□□□□ -2.16
SMG1-212ENST00000566328 E7ENQ6 273 aa1.54□□□□□ -2.16
SMG1-212ENST00000566328 MEIS2O14770 477 aa1.54□□□□□ -2.16
SMG1-212ENST00000566328 TXNL1O43396 289 aa1.54□□□□□ -2.16
SMG1-212ENST00000566328 ATP1B1P05026 303 aa1.54□□□□□ -2.16
SMG1-212ENST00000566328 ADORA3P0DMS8 318 aa1.54□□□□□ -2.16
SMG1-212ENST00000566328 HAPLN1P10915 354 aaPredicted RBP1.54□□□□□ -2.16
SMG1-212ENST00000566328 ARL3P36405 182 aa1.54□□□□□ -2.16
SMG1-212ENST00000566328 TRAP1Q12931 704 aaKnown RBP1.54□□□□□ -2.16
SMG1-212ENST00000566328 SRSF9Q13242 221 aaKnown RBP eCLIP1.54□□□□□ -2.16
SMG1-212ENST00000566328 TRA2AQ13595 282 aaKnown RBP eCLIP1.54□□□□□ -2.16
SMG1-212ENST00000566328 SIX1Q15475 284 aaPredicted RBP1.54□□□□□ -2.16
SMG1-212ENST00000566328 FGD3Q5JSP0 725 aa1.54□□□□□ -2.16
SMG1-212ENST00000566328 LEMD1Q68G75 181 aa1.54□□□□□ -2.16
SMG1-212ENST00000566328 IKBIPQ70UQ0 350 aa1.54□□□□□ -2.16
SMG1-212ENST00000566328 ARHGAP22Q7Z5H3 698 aa1.54□□□□□ -2.16
SMG1-212ENST00000566328 PXKQ7Z7A4 578 aa1.54□□□□□ -2.16
SMG1-212ENST00000566328 GPC2Q8N158 579 aa1.54□□□□□ -2.16
SMG1-212ENST00000566328 C1orf131Q8NDD1 294 aaKnown RBP1.54□□□□□ -2.16
SMG1-212ENST00000566328 DGAT2Q96PD7 388 aa1.54□□□□□ -2.16
SMG1-212ENST00000566328 MS4A10Q96PG2 267 aa1.54□□□□□ -2.16
SMG1-212ENST00000566328 MMP27Q9H306 513 aa1.54□□□□□ -2.16
SMG1-212ENST00000566328 MARCH7Q9H992 704 aa1.54□□□□□ -2.16
SMG1-212ENST00000566328 LUZP4Q9P127 313 aa1.54□□□□□ -2.16
SMG1-212ENST00000566328 ZNF69Q9UC07 566 aa1.54□□□□□ -2.16
SMG1-212ENST00000566328 TMED3Q9Y3Q3 217 aa1.54□□□□□ -2.16
SMG1-212ENST00000566328 MTUS2Q5JR59 1369 aa1.54□□□□□ -2.16
SMG1-212ENST00000566328 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP1.54□□□□□ -2.16
SMG1-212ENST00000566328 TROQ12816 1431 aaPredicted RBP1.54□□□□□ -2.16
SMG1-212ENST00000566328 EEA1Q15075 1411 aa1.54□□□□□ -2.16
SMG1-212ENST00000566328 CASKIN1Q8WXD9 1431 aa1.54□□□□□ -2.16
SMG1-212ENST00000566328 TEX14Q8IWB6 1497 aa1.54□□□□□ -2.16
SMG1-212ENST00000566328 ARHGAP5Q13017 1502 aa1.54□□□□□ -2.16
SMG1-212ENST00000566328 SAMD9Q5K651 1589 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms