RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 TRMT1Q9NXH9 659 aaKnown RBP8.54□□□□□ -1.04
VPS9D1-205ENST00000565452 UBP1Q9NZI7 540 aa8.54□□□□□ -1.04
VPS9D1-205ENST00000565452 C19orf25Q9UFG5 118 aaPredicted RBP8.54□□□□□ -1.04
VPS9D1-205ENST00000565452 TRPS1Q9UHF7 1281 aa8.54□□□□□ -1.04
VPS9D1-205ENST00000565452 FAM153AQ9UHL3 310 aa8.54□□□□□ -1.04
VPS9D1-205ENST00000565452 CRLS1Q9UJA2 301 aa8.54□□□□□ -1.04
VPS9D1-205ENST00000565452 HYOU1Q9Y4L1 999 aa8.54□□□□□ -1.04
VPS9D1-205ENST00000565452 FAM169AQ9Y6X4 670 aa8.54□□□□□ -1.04
VPS9D1-205ENST00000565452 HCFC1P51610 2035 aa8.53□□□□□ -1.04
VPS9D1-205ENST00000565452 hCG_1818297A0A087WSY0 165 aa8.53□□□□□ -1.04
VPS9D1-205ENST00000565452 HACD1B0YJ81 288 aa8.53□□□□□ -1.04
VPS9D1-205ENST00000565452 FAM47E-STBD1D6RA91 191 aa8.53□□□□□ -1.04
VPS9D1-205ENST00000565452 APOC4-APOC2K7ER74 178 aa8.53□□□□□ -1.04
VPS9D1-205ENST00000565452 HAX1O00165 279 aa8.53□□□□□ -1.04
VPS9D1-205ENST00000565452 CES2O00748 559 aa8.53□□□□□ -1.04
VPS9D1-205ENST00000565452 LIN7AO14910 233 aaPredicted RBP8.53□□□□□ -1.04
VPS9D1-205ENST00000565452 NME2P1O60361 137 aa8.53□□□□□ -1.04
VPS9D1-205ENST00000565452 CST8O60676 142 aa8.53□□□□□ -1.04
VPS9D1-205ENST00000565452 SLC25A12O75746 678 aa8.53□□□□□ -1.04
VPS9D1-205ENST00000565452 PDE9AO76083 593 aa8.53□□□□□ -1.04
VPS9D1-205ENST00000565452 SEC24DO94855 1032 aaPredicted RBP8.53□□□□□ -1.04
VPS9D1-205ENST00000565452 FKBP9O95302 570 aa8.53□□□□□ -1.04
VPS9D1-205ENST00000565452 FTCDO95954 541 aa8.53□□□□□ -1.04
VPS9D1-205ENST00000565452 S1PR4O95977 384 aa8.53□□□□□ -1.04
VPS9D1-205ENST00000565452 APOC2P02655 101 aa8.53□□□□□ -1.04
VPS9D1-205ENST00000565452 TPBGLP0DKB5 382 aa8.53□□□□□ -1.04
VPS9D1-205ENST00000565452 ERVK-10P10266 1014 aa8.53□□□□□ -1.04
VPS9D1-205ENST00000565452 BMP7P18075 431 aa8.53□□□□□ -1.04
VPS9D1-205ENST00000565452 NME2P22392 152 aa8.53□□□□□ -1.04
VPS9D1-205ENST00000565452 PEBP1P30086 187 aaKnown RBP8.53□□□□□ -1.04
VPS9D1-205ENST00000565452 UQCRC1P31930 480 aa8.53□□□□□ -1.04
VPS9D1-205ENST00000565452 SLC26A3P40879 764 aa8.53□□□□□ -1.04
VPS9D1-205ENST00000565452 EMP3P54852 163 aa8.53□□□□□ -1.04
VPS9D1-205ENST00000565452 WNT3AP56704 352 aa8.53□□□□□ -1.04
VPS9D1-205ENST00000565452 PLOD1Q02809 727 aaPredicted RBP8.53□□□□□ -1.04
VPS9D1-205ENST00000565452 CBLBQ13191 982 aa8.53□□□□□ -1.04
VPS9D1-205ENST00000565452 SNTB1Q13884 538 aaKnown RBP8.53□□□□□ -1.04
VPS9D1-205ENST00000565452 EXT1Q16394 746 aa8.53□□□□□ -1.04
VPS9D1-205ENST00000565452 ZNF658BQ4V348 819 aaPredicted RBP8.53□□□□□ -1.04
VPS9D1-205ENST00000565452 TEX44Q53QW1 395 aa8.53□□□□□ -1.04
VPS9D1-205ENST00000565452 SEL1L2Q5TEA6 688 aa8.53□□□□□ -1.04
VPS9D1-205ENST00000565452 PRSS57Q6UWY2 283 aa8.53□□□□□ -1.04
VPS9D1-205ENST00000565452 BBS12Q6ZW61 710 aa8.53□□□□□ -1.04
VPS9D1-205ENST00000565452 RFX6Q8HWS3 928 aa8.53□□□□□ -1.04
VPS9D1-205ENST00000565452 RPRMLQ8N4K4 120 aa8.53□□□□□ -1.04
VPS9D1-205ENST00000565452 DTWD1Q8N5C7 304 aa8.53□□□□□ -1.04
VPS9D1-205ENST00000565452 PQLC3Q8N755 202 aa8.53□□□□□ -1.04
VPS9D1-205ENST00000565452 PLD5Q8N7P1 536 aa8.53□□□□□ -1.04
VPS9D1-205ENST00000565452 KRT35Q92764 455 aa8.53□□□□□ -1.04
VPS9D1-205ENST00000565452 P3H4Q92791 437 aa8.53□□□□□ -1.04
VPS9D1-205ENST00000565452 HAUS1Q96CS2 278 aa8.53□□□□□ -1.04
VPS9D1-205ENST00000565452 CABS1Q96KC9 395 aa8.53□□□□□ -1.04
VPS9D1-205ENST00000565452 CYTH2Q99418 400 aa8.53□□□□□ -1.04
VPS9D1-205ENST00000565452 NAP1L3Q99457 506 aaPredicted RBP8.53□□□□□ -1.04
VPS9D1-205ENST00000565452 PLEKHF2Q9H8W4 249 aa8.53□□□□□ -1.04
VPS9D1-205ENST00000565452 HOMER3Q9NSC5 361 aa8.53□□□□□ -1.04
VPS9D1-205ENST00000565452 STOX2Q9P2F5 926 aaPredicted RBP8.53□□□□□ -1.04
VPS9D1-205ENST00000565452 CBLCQ9ULV8 474 aa8.53□□□□□ -1.04
VPS9D1-205ENST00000565452 PYCARDQ9ULZ3 195 aa8.53□□□□□ -1.04
VPS9D1-205ENST00000565452 PLAGL1Q9UM63 463 aa8.53□□□□□ -1.04
VPS9D1-205ENST00000565452 ZKSCAN5Q9Y2L8 839 aa8.53□□□□□ -1.04
VPS9D1-205ENST00000565452 TLN2Q9Y4G6 2542 aa8.52□□□□□ -1.04
VPS9D1-205ENST00000565452 AGAP14A8MT82 685 aa8.52□□□□□ -1.05
VPS9D1-205ENST00000565452 PPP1R12AO14974 1030 aaPredicted RBP8.52□□□□□ -1.05
VPS9D1-205ENST00000565452 HS6ST1O60243 411 aa8.52□□□□□ -1.05
VPS9D1-205ENST00000565452 CD53P19397 219 aa8.52□□□□□ -1.05
VPS9D1-205ENST00000565452 CD9P21926 228 aa8.52□□□□□ -1.05
VPS9D1-205ENST00000565452 ACVR2AP27037 513 aa8.52□□□□□ -1.05
VPS9D1-205ENST00000565452 ACADLP28330 430 aa8.52□□□□□ -1.05
VPS9D1-205ENST00000565452 CYB561P49447 251 aa8.52□□□□□ -1.05
VPS9D1-205ENST00000565452 ST13P50502 369 aaKnown RBP8.52□□□□□ -1.05
VPS9D1-205ENST00000565452 TAS2R50P59544 299 aa8.52□□□□□ -1.05
VPS9D1-205ENST00000565452 ACTN3Q08043 901 aaPredicted RBP8.52□□□□□ -1.05
VPS9D1-205ENST00000565452 PTPRCAPQ14761 206 aa8.52□□□□□ -1.05
VPS9D1-205ENST00000565452 NOMO1Q15155 1222 aa8.52□□□□□ -1.05
VPS9D1-205ENST00000565452 CMPK2Q5EBM0 449 aa8.52□□□□□ -1.05
VPS9D1-205ENST00000565452 EMC4Q5J8M3 183 aa8.52□□□□□ -1.05
VPS9D1-205ENST00000565452 Q5PR19 223 aa8.52□□□□□ -1.05
VPS9D1-205ENST00000565452 B3GNT6Q6ZMB0 384 aa8.52□□□□□ -1.05
VPS9D1-205ENST00000565452 WDR53Q7Z5U6 358 aaPredicted RBP8.52□□□□□ -1.05
VPS9D1-205ENST00000565452 LIX1LQ8IVB5 337 aa8.52□□□□□ -1.05
VPS9D1-205ENST00000565452 LGI4Q8N135 537 aa8.52□□□□□ -1.05
VPS9D1-205ENST00000565452 LRRC75A-AS1Q8N1F1 130 aa8.52□□□□□ -1.05
VPS9D1-205ENST00000565452 C2orf73Q8N5S3 287 aaPredicted RBP8.52□□□□□ -1.05
VPS9D1-205ENST00000565452 AMER2Q8N7J2 671 aa8.52□□□□□ -1.05
VPS9D1-205ENST00000565452 OR4K2Q8NGD2 314 aa8.52□□□□□ -1.05
VPS9D1-205ENST00000565452 C16orf52Q8NHV5 167 aa8.52□□□□□ -1.05
VPS9D1-205ENST00000565452 ALG3Q92685 438 aa8.52□□□□□ -1.05
VPS9D1-205ENST00000565452 MMABQ96EY8 250 aaPredicted RBP8.52□□□□□ -1.05
VPS9D1-205ENST00000565452 Q96MF0 132 aa8.52□□□□□ -1.05
VPS9D1-205ENST00000565452 TTYH2Q9BSA4 534 aa8.52□□□□□ -1.05
VPS9D1-205ENST00000565452 MENTQ9BUN1 341 aa8.52□□□□□ -1.05
VPS9D1-205ENST00000565452 CDCP1Q9H5V8 836 aa8.52□□□□□ -1.05
VPS9D1-205ENST00000565452 FAM96AQ9H5X1 160 aa8.52□□□□□ -1.05
VPS9D1-205ENST00000565452 MMP25Q9NPA2 562 aa8.52□□□□□ -1.05
VPS9D1-205ENST00000565452 ZDHHC3Q9NYG2 299 aa8.52□□□□□ -1.05
VPS9D1-205ENST00000565452 RNF14Q9UBS8 474 aa8.52□□□□□ -1.05
VPS9D1-205ENST00000565452 TTC7AQ9ULT0 858 aaPredicted RBP8.52□□□□□ -1.05
VPS9D1-205ENST00000565452 KLF13Q9Y2Y9 288 aaPredicted RBP8.52□□□□□ -1.05
VPS9D1-205ENST00000565452 HEY1Q9Y5J3 304 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms