RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 NDC80O14777 642 aa17.59■□□□□ 0.41
CLN6-204ENST00000564752 CCNDBP1O95273 360 aa17.59■□□□□ 0.41
CLN6-204ENST00000564752 SLC16A8O95907 504 aa17.59■□□□□ 0.41
CLN6-204ENST00000564752 ACPPP15309 386 aa17.59■□□□□ 0.41
CLN6-204ENST00000564752 FBLP22087 321 aaKnown RBP17.59■□□□□ 0.41
CLN6-204ENST00000564752 RGS4P49798 205 aa17.59■□□□□ 0.41
CLN6-204ENST00000564752 PRDX1Q06830 199 aaKnown RBP17.59■□□□□ 0.41
CLN6-204ENST00000564752 ZNF169Q14929 603 aaPredicted RBP17.59■□□□□ 0.41
CLN6-204ENST00000564752 VWA2Q5GFL6 755 aa17.59■□□□□ 0.41
CLN6-204ENST00000564752 RBM20Q5T481 1227 aaKnown RBP17.59■□□□□ 0.41
CLN6-204ENST00000564752 B3GNTL1Q67FW5 361 aaPredicted RBP17.59■□□□□ 0.41
CLN6-204ENST00000564752 ISLR2Q6UXK2 745 aa17.59■□□□□ 0.41
CLN6-204ENST00000564752 UBE2R2Q712K3 238 aaPredicted RBP17.59■□□□□ 0.41
CLN6-204ENST00000564752 LAPTM4BQ86VI4 370 aa17.59■□□□□ 0.41
CLN6-204ENST00000564752 PAQR7Q86WK9 346 aa17.59■□□□□ 0.41
CLN6-204ENST00000564752 PRSS58Q8IYP2 241 aa17.59■□□□□ 0.41
CLN6-204ENST00000564752 PPFIBP2Q8ND30 876 aa17.59■□□□□ 0.41
CLN6-204ENST00000564752 ZNF480Q8WV37 535 aa17.59■□□□□ 0.41
CLN6-204ENST00000564752 CABS1Q96KC9 395 aa17.59■□□□□ 0.41
CLN6-204ENST00000564752 WDR83Q9BRX9 315 aaKnown RBP17.59■□□□□ 0.41
CLN6-204ENST00000564752 SYNPO2LQ9H987 977 aa17.59■□□□□ 0.41
CLN6-204ENST00000564752 ZNF160Q9HCG1 818 aa17.59■□□□□ 0.41
CLN6-204ENST00000564752 SLC17A6Q9P2U8 582 aa17.59■□□□□ 0.41
CLN6-204ENST00000564752 TAC3Q9UHF0 121 aa17.59■□□□□ 0.41
CLN6-204ENST00000564752 CDC14AQ9UNH5 594 aa17.59■□□□□ 0.41
CLN6-204ENST00000564752 TEX264Q9Y6I9 313 aa17.59■□□□□ 0.41
CLN6-204ENST00000564752 DOCK10Q96BY6 2186 aa17.58■□□□□ 0.4
CLN6-204ENST00000564752 GFYI3L273 518 aa17.58■□□□□ 0.4
CLN6-204ENST00000564752 MAP2K7O14733 419 aa17.58■□□□□ 0.4
CLN6-204ENST00000564752 KLHL18O94889 574 aa17.58■□□□□ 0.4
CLN6-204ENST00000564752 COL8A1P27658 744 aa17.58■□□□□ 0.4
CLN6-204ENST00000564752 GABRB3P28472 473 aa17.58■□□□□ 0.4
CLN6-204ENST00000564752 SKIV2L2P42285 1042 aaKnown RBP17.58■□□□□ 0.4
CLN6-204ENST00000564752 CDC16Q13042 620 aa17.58■□□□□ 0.4
CLN6-204ENST00000564752 MFAP5Q13361 173 aa17.58■□□□□ 0.4
CLN6-204ENST00000564752 TLR1Q15399 786 aa17.58■□□□□ 0.4
CLN6-204ENST00000564752 CYHR1Q6ZMK1 362 aa17.58■□□□□ 0.4
CLN6-204ENST00000564752 NDUFAF7Q7L592 441 aa17.58■□□□□ 0.4
CLN6-204ENST00000564752 GALNT7Q86SF2 657 aa17.58■□□□□ 0.4
CLN6-204ENST00000564752 MYO1HQ8N1T3 1032 aa17.58■□□□□ 0.4
CLN6-204ENST00000564752 GRHL3Q8TE85 626 aa17.58■□□□□ 0.4
CLN6-204ENST00000564752 C8orf44Q96CB5 159 aa17.58■□□□□ 0.4
CLN6-204ENST00000564752 MVB12AQ96EY5 273 aa17.58■□□□□ 0.4
CLN6-204ENST00000564752 CNDP1Q96KN2 507 aa17.58■□□□□ 0.4
CLN6-204ENST00000564752 OR2A5Q96R48 311 aa17.58■□□□□ 0.4
CLN6-204ENST00000564752 PLAC1Q9HBJ0 212 aa17.58■□□□□ 0.4
CLN6-204ENST00000564752 ABCF3Q9NUQ8 709 aa17.58■□□□□ 0.4
CLN6-204ENST00000564752 MDC1Q14676 2089 aaKnown RBP17.57■□□□□ 0.4
CLN6-204ENST00000564752 HEATR5BQ9P2D3 2071 aa17.57■□□□□ 0.4
CLN6-204ENST00000564752 CELSR2Q9HCU4 2923 aa17.57■□□□□ 0.4
CLN6-204ENST00000564752 E7ENX8 843 aa17.57■□□□□ 0.4
CLN6-204ENST00000564752 AHSGP02765 367 aa17.57■□□□□ 0.4
CLN6-204ENST00000564752 RPL21P46778 160 aaKnown RBP17.57■□□□□ 0.4
CLN6-204ENST00000564752 EMP2P54851 167 aa17.57■□□□□ 0.4
CLN6-204ENST00000564752 TAP2Q03519 686 aa17.57■□□□□ 0.4
CLN6-204ENST00000564752 RELAQ04206 551 aa17.57■□□□□ 0.4
CLN6-204ENST00000564752 PDIA2Q13087 525 aaKnown RBP17.57■□□□□ 0.4
CLN6-204ENST00000564752 DSG2Q14126 1118 aa17.57■□□□□ 0.4
CLN6-204ENST00000564752 HKDC1Q2TB90 917 aa17.57■□□□□ 0.4
CLN6-204ENST00000564752 TEDDM1Q5T9Z0 273 aa17.57■□□□□ 0.4
CLN6-204ENST00000564752 THEMIS2Q5TEJ8 643 aa17.57■□□□□ 0.4
CLN6-204ENST00000564752 ICE2Q659A1 982 aa17.57■□□□□ 0.4
CLN6-204ENST00000564752 STEAP4Q687X5 459 aa17.57■□□□□ 0.4
CLN6-204ENST00000564752 ZNF425Q6IV72 752 aa17.57■□□□□ 0.4
CLN6-204ENST00000564752 TRMT10BQ6PF06 316 aaKnown RBP17.57■□□□□ 0.4
CLN6-204ENST00000564752 LINC00696Q6ZRV3 163 aa17.57■□□□□ 0.4
CLN6-204ENST00000564752 ANKMY2Q8IV38 441 aa17.57■□□□□ 0.4
CLN6-204ENST00000564752 PALM2Q8IXS6 379 aa17.57■□□□□ 0.4
CLN6-204ENST00000564752 KBTBD2Q8IY47 623 aa17.57■□□□□ 0.4
CLN6-204ENST00000564752 C17orf53Q8N3J3 647 aaPredicted RBP17.57■□□□□ 0.4
CLN6-204ENST00000564752 CSNK1A1LQ8N752 337 aa17.57■□□□□ 0.4
CLN6-204ENST00000564752 GPATCH11Q8N954 259 aa17.57■□□□□ 0.4
CLN6-204ENST00000564752 EEF1AKMT1Q8WVE0 214 aa17.57■□□□□ 0.4
CLN6-204ENST00000564752 FAR1Q8WVX9 515 aa17.57■□□□□ 0.4
CLN6-204ENST00000564752 UTP6Q9NYH9 597 aaKnown RBP17.57■□□□□ 0.4
CLN6-204ENST00000564752 CORO1CQ9ULV4 474 aaPredicted RBP17.57■□□□□ 0.4
CLN6-204ENST00000564752 RUVBL1Q9Y265 456 aaKnown RBP17.57■□□□□ 0.4
CLN6-204ENST00000564752 SNX24Q9Y343 169 aa17.57■□□□□ 0.4
CLN6-204ENST00000564752 NSG1A0A0A6YYJ2 146 aa17.56■□□□□ 0.4
CLN6-204ENST00000564752 A0A1W2PQ72 361 aa17.56■□□□□ 0.4
CLN6-204ENST00000564752 E2F3O00716 465 aa17.56■□□□□ 0.4
CLN6-204ENST00000564752 PRPF4O43172 522 aaKnown RBP eCLIP17.56■□□□□ 0.42e-7■■■■■ 31.7
CLN6-204ENST00000564752 C8GP07360 202 aa17.56■□□□□ 0.4
CLN6-204ENST00000564752 COX6A1P12074 109 aa17.56■□□□□ 0.4
CLN6-204ENST00000564752 EDN3P14138 238 aa17.56■□□□□ 0.4
CLN6-204ENST00000564752 IMPA1P29218 277 aa17.56■□□□□ 0.4
CLN6-204ENST00000564752 CASQ1P31415 396 aa17.56■□□□□ 0.4
CLN6-204ENST00000564752 SLC26A3P40879 764 aa17.56■□□□□ 0.4
CLN6-204ENST00000564752 CDKN2DP55273 166 aa17.56■□□□□ 0.4
CLN6-204ENST00000564752 TIAL1Q01085 375 aaKnown RBP eCLIP17.56■□□□□ 0.4
CLN6-204ENST00000564752 SP140Q13342 867 aa17.56■□□□□ 0.4
CLN6-204ENST00000564752 PDAP1Q13442 181 aaKnown RBP17.56■□□□□ 0.4
CLN6-204ENST00000564752 GARNL3Q5VVW2 1013 aa17.56■□□□□ 0.4
CLN6-204ENST00000564752 RPUSD3Q6P087 351 aaKnown RBP17.56■□□□□ 0.4
CLN6-204ENST00000564752 PAQR3Q6TCH7 311 aa17.56■□□□□ 0.4
CLN6-204ENST00000564752 ADCK2Q7Z695 626 aa17.56■□□□□ 0.4
CLN6-204ENST00000564752 ARHGEF39Q8N4T4 335 aa17.56■□□□□ 0.4
CLN6-204ENST00000564752 BBOF1Q8ND07 529 aa17.56■□□□□ 0.4
CLN6-204ENST00000564752 FBXO36Q8NEA4 188 aa17.56■□□□□ 0.4
CLN6-204ENST00000564752 CATSPER1Q8NEC5 780 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms