RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 NDC80O14777 642 aa18.99■□□□□ 0.63
SHCBP1-203ENST00000564272 FOXS1O43638 330 aa18.99■□□□□ 0.63
SHCBP1-203ENST00000564272 CDH1P12830 882 aa18.99■□□□□ 0.63
SHCBP1-203ENST00000564272 ITGA3P26006 1051 aa18.99■□□□□ 0.63
SHCBP1-203ENST00000564272 ETF1P62495 437 aaKnown RBP18.99■□□□□ 0.63
SHCBP1-203ENST00000564272 CSNK1G2P78368 415 aa18.99■□□□□ 0.63
SHCBP1-203ENST00000564272 AIMP2Q13155 320 aaKnown RBP18.99■□□□□ 0.63
SHCBP1-203ENST00000564272 DSG2Q14126 1118 aa18.99■□□□□ 0.63
SHCBP1-203ENST00000564272 GARNL3Q5VVW2 1013 aa18.99■□□□□ 0.63
SHCBP1-203ENST00000564272 SLC6A19Q695T7 634 aa18.99■□□□□ 0.63
SHCBP1-203ENST00000564272 JMJD6Q6NYC1 403 aaPredicted RBP18.99■□□□□ 0.63
SHCBP1-203ENST00000564272 VN1R4Q7Z5H5 301 aa18.99■□□□□ 0.63
SHCBP1-203ENST00000564272 SLC26A11Q86WA9 606 aa18.99■□□□□ 0.63
SHCBP1-203ENST00000564272 C17orf64Q86WR6 236 aa18.99■□□□□ 0.63
SHCBP1-203ENST00000564272 NACC2Q96BF6 587 aa18.99■□□□□ 0.63
SHCBP1-203ENST00000564272 MVB12AQ96EY5 273 aa18.99■□□□□ 0.63
SHCBP1-203ENST00000564272 MMABQ96EY8 250 aaPredicted RBP18.99■□□□□ 0.63
SHCBP1-203ENST00000564272 YIPF2Q9BWQ6 316 aa18.99■□□□□ 0.63
SHCBP1-203ENST00000564272 DRC3Q9H069 523 aa18.99■□□□□ 0.63
SHCBP1-203ENST00000564272 ZNF552Q9H707 407 aaPredicted RBP18.99■□□□□ 0.63
SHCBP1-203ENST00000564272 SAYSD1Q9NPB0 183 aa18.99■□□□□ 0.63
SHCBP1-203ENST00000564272 ATP13A2Q9NQ11 1180 aa18.99■□□□□ 0.63
SHCBP1-203ENST00000564272 SMYD2Q9NRG4 433 aa18.99■□□□□ 0.63
SHCBP1-203ENST00000564272 GRHL1Q9NZI5 618 aa18.99■□□□□ 0.63
SHCBP1-203ENST00000564272 WHRNQ9P202 907 aa18.99■□□□□ 0.63
SHCBP1-203ENST00000564272 TRPC4Q9UBN4 977 aa18.99■□□□□ 0.63
SHCBP1-203ENST00000564272 C3orf18Q9UK00 162 aa18.99■□□□□ 0.63
SHCBP1-203ENST00000564272 CDC14AQ9UNH5 594 aa18.99■□□□□ 0.63
SHCBP1-203ENST00000564272 FEZF1A0PJY2 475 aa18.98■□□□□ 0.63
SHCBP1-203ENST00000564272 PABPN1LA6NDY0 278 aaKnown RBP18.98■□□□□ 0.63
SHCBP1-203ENST00000564272 TXNDC9O14530 226 aa18.98■□□□□ 0.63
SHCBP1-203ENST00000564272 PRPF4O43172 522 aaKnown RBP eCLIP18.98■□□□□ 0.63
SHCBP1-203ENST00000564272 ANXA5P08758 320 aa18.98■□□□□ 0.63
SHCBP1-203ENST00000564272 ZNF37AP17032 561 aaPredicted RBP18.98■□□□□ 0.63
SHCBP1-203ENST00000564272 CCND1P24385 295 aa18.98■□□□□ 0.63
SHCBP1-203ENST00000564272 HRH2P25021 359 aa18.98■□□□□ 0.63
SHCBP1-203ENST00000564272 BCL6P41182 706 aa18.98■□□□□ 0.63
SHCBP1-203ENST00000564272 CD97P48960 835 aa18.98■□□□□ 0.63
SHCBP1-203ENST00000564272 RPS15AP62244 130 aaKnown RBP18.98■□□□□ 0.63
SHCBP1-203ENST00000564272 CALCOCO2Q13137 446 aa18.98■□□□□ 0.63
SHCBP1-203ENST00000564272 CBLBQ13191 982 aa18.98■□□□□ 0.63
SHCBP1-203ENST00000564272 SYT16Q17RD7 645 aa18.98■□□□□ 0.63
SHCBP1-203ENST00000564272 TUBB8Q3ZCM7 444 aa18.98■□□□□ 0.63
SHCBP1-203ENST00000564272 PRR30Q53SZ7 412 aaPredicted RBP18.98■□□□□ 0.63
SHCBP1-203ENST00000564272 CAPN13Q6MZZ7 669 aaPredicted RBP18.98■□□□□ 0.63
SHCBP1-203ENST00000564272 LCTLQ6UWM7 567 aa18.98■□□□□ 0.63
SHCBP1-203ENST00000564272 MAATS1Q7Z4T9 603 aa18.98■□□□□ 0.63
SHCBP1-203ENST00000564272 LAPTM4BQ86VI4 370 aa18.98■□□□□ 0.63
SHCBP1-203ENST00000564272 HPS6Q86YV9 775 aa18.98■□□□□ 0.63
SHCBP1-203ENST00000564272 Q8NA96 180 aa18.98■□□□□ 0.63
SHCBP1-203ENST00000564272 OR11G2Q8NGC1 345 aa18.98■□□□□ 0.63
SHCBP1-203ENST00000564272 PYCR2Q96C36 320 aa18.98■□□□□ 0.63
SHCBP1-203ENST00000564272 MACROD1Q9BQ69 325 aa18.98■□□□□ 0.63
SHCBP1-203ENST00000564272 C5AR2Q9P296 337 aa18.98■□□□□ 0.63
SHCBP1-203ENST00000564272 NPEPPSL1A6NEC2 478 aa18.97■□□□□ 0.63
SHCBP1-203ENST00000564272 CDC7O00311 574 aa18.97■□□□□ 0.63
SHCBP1-203ENST00000564272 GUCA1CO95843 209 aa18.97■□□□□ 0.63
SHCBP1-203ENST00000564272 ALPPP05187 535 aa18.97■□□□□ 0.63
SHCBP1-203ENST00000564272 SSTR1P30872 391 aa18.97■□□□□ 0.63
SHCBP1-203ENST00000564272 SLC26A3P40879 764 aa18.97■□□□□ 0.63
SHCBP1-203ENST00000564272 AP1S2P56377 157 aa18.97■□□□□ 0.63
SHCBP1-203ENST00000564272 SOX8P57073 446 aa18.97■□□□□ 0.63
SHCBP1-203ENST00000564272 TAS2R39P59534 338 aa18.97■□□□□ 0.63
SHCBP1-203ENST00000564272 MAT1AQ00266 395 aaKnown RBP18.97■□□□□ 0.63
SHCBP1-203ENST00000564272 DUPD1Q68J44 220 aa18.97■□□□□ 0.63
SHCBP1-203ENST00000564272 SBSNQ6UWP8 590 aa18.97■□□□□ 0.63
SHCBP1-203ENST00000564272 PRSS41Q7RTY9 318 aa18.97■□□□□ 0.63
SHCBP1-203ENST00000564272 OR56A3Q8NH54 315 aa18.97■□□□□ 0.63
SHCBP1-203ENST00000564272 CPT1CQ8TCG5 803 aa18.97■□□□□ 0.63
SHCBP1-203ENST00000564272 PYROXD1Q8WU10 500 aa18.97■□□□□ 0.63
SHCBP1-203ENST00000564272 C8orf44Q96CB5 159 aa18.97■□□□□ 0.63
SHCBP1-203ENST00000564272 FBXL8Q96CD0 374 aa18.97■□□□□ 0.63
SHCBP1-203ENST00000564272 OR4K3Q96R72 315 aa18.97■□□□□ 0.63
SHCBP1-203ENST00000564272 TRIM54Q9BYV2 358 aa18.97■□□□□ 0.63
SHCBP1-203ENST00000564272 ZBTB20Q9HC78 741 aaPredicted RBP18.97■□□□□ 0.63
SHCBP1-203ENST00000564272 SETXQ7Z333 2677 aaKnown RBP18.96■□□□□ 0.63
SHCBP1-203ENST00000564272 MAP2K7O14733 419 aa18.96■□□□□ 0.63
SHCBP1-203ENST00000564272 ENO2P09104 434 aaPredicted RBP18.96■□□□□ 0.63
SHCBP1-203ENST00000564272 ACPPP15309 386 aa18.96■□□□□ 0.63
SHCBP1-203ENST00000564272 NPPBP16860 134 aa18.96■□□□□ 0.63
SHCBP1-203ENST00000564272 MEF2AQ02078 507 aaPredicted RBP18.96■□□□□ 0.63
SHCBP1-203ENST00000564272 NDUFA9Q16795 377 aa18.96■□□□□ 0.63
SHCBP1-203ENST00000564272 PPP1R3AQ16821 1122 aa18.96■□□□□ 0.63
SHCBP1-203ENST00000564272 CEP97Q8IW35 865 aa18.96■□□□□ 0.63
SHCBP1-203ENST00000564272 ZC3H7AQ8IWR0 971 aaKnown RBP18.96■□□□□ 0.63
SHCBP1-203ENST00000564272 PARP9Q8IXQ6 854 aa18.96■□□□□ 0.63
SHCBP1-203ENST00000564272 SHISA5Q8N114 240 aa18.96■□□□□ 0.63
SHCBP1-203ENST00000564272 OR9A4Q8NGU2 314 aa18.96■□□□□ 0.63
SHCBP1-203ENST00000564272 ZCCHC10Q8TBK6 192 aa18.96■□□□□ 0.63
SHCBP1-203ENST00000564272 PNPLA2Q96AD5 504 aa18.96■□□□□ 0.63
SHCBP1-203ENST00000564272 PDLIM5Q96HC4 596 aaKnown RBP18.96■□□□□ 0.63
SHCBP1-203ENST00000564272 VPS39Q96JC1 886 aa18.96■□□□□ 0.63
SHCBP1-203ENST00000564272 HAUS8Q9BT25 410 aa18.96■□□□□ 0.63
SHCBP1-203ENST00000564272 MCMBPQ9BTE3 642 aa18.96■□□□□ 0.63
SHCBP1-203ENST00000564272 RHOJQ9H4E5 214 aa18.96■□□□□ 0.63
SHCBP1-203ENST00000564272 C14orf105Q9NVL8 296 aa18.96■□□□□ 0.63
SHCBP1-203ENST00000564272 NSMCE4AQ9NXX6 385 aa18.96■□□□□ 0.63
SHCBP1-203ENST00000564272 DOCK10Q96BY6 2186 aa18.96■□□□□ 0.63
SHCBP1-203ENST00000564272 KCNE1BA0A087WTH5 132 aa18.95■□□□□ 0.62
SHCBP1-203ENST00000564272 CXorf49A8MYA2 514 aaPredicted RBP18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms