RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 PECAM1P16284 738 aaPredicted RBP7.25□□□□□ -1.25
HERPUD1-206ENST00000563343 RFC3P40938 356 aa7.25□□□□□ -1.25
HERPUD1-206ENST00000563343 ARHGAP25P42331 645 aa7.25□□□□□ -1.25
HERPUD1-206ENST00000563343 UBE2HP62256 183 aa7.25□□□□□ -1.25
HERPUD1-206ENST00000563343 MAT1AQ00266 395 aaKnown RBP7.25□□□□□ -1.25
HERPUD1-206ENST00000563343 OC90Q02509 493 aaPredicted RBP7.25□□□□□ -1.25
HERPUD1-206ENST00000563343 KEAP1Q14145 624 aa7.25□□□□□ -1.25
HERPUD1-206ENST00000563343 EXT1Q16394 746 aa7.25□□□□□ -1.25
HERPUD1-206ENST00000563343 DNAJC21Q5F1R6 531 aaKnown RBP7.25□□□□□ -1.25
HERPUD1-206ENST00000563343 DENND5AQ6IQ26 1287 aa7.25□□□□□ -1.25
HERPUD1-206ENST00000563343 ARHGAP11AQ6P4F7 1023 aa7.25□□□□□ -1.25
HERPUD1-206ENST00000563343 PACS1Q6VY07 963 aa7.25□□□□□ -1.25
HERPUD1-206ENST00000563343 ANKRD37Q7Z713 158 aa7.25□□□□□ -1.25
HERPUD1-206ENST00000563343 DCUN1D3Q8IWE4 304 aa7.25□□□□□ -1.25
HERPUD1-206ENST00000563343 SLC22A15Q8IZD6 547 aa7.25□□□□□ -1.25
HERPUD1-206ENST00000563343 HORMAD2Q8N7B1 307 aa7.25□□□□□ -1.25
HERPUD1-206ENST00000563343 SIMC1Q8NDZ2 872 aa7.25□□□□□ -1.25
HERPUD1-206ENST00000563343 HMGCLL1Q8TB92 370 aa7.25□□□□□ -1.25
HERPUD1-206ENST00000563343 ELP5Q8TE02 316 aa7.25□□□□□ -1.25
HERPUD1-206ENST00000563343 MIPEPQ99797 713 aa7.25□□□□□ -1.25
HERPUD1-206ENST00000563343 ZFYVE21Q9BQ24 234 aa7.25□□□□□ -1.25
HERPUD1-206ENST00000563343 YIPF2Q9BWQ6 316 aa7.25□□□□□ -1.25
HERPUD1-206ENST00000563343 SLC6A16Q9GZN6 736 aa7.25□□□□□ -1.25
HERPUD1-206ENST00000563343 CDCP1Q9H5V8 836 aa7.25□□□□□ -1.25
HERPUD1-206ENST00000563343 NEUROD4Q9HD90 331 aa7.25□□□□□ -1.25
HERPUD1-206ENST00000563343 BEX4Q9NWD9 120 aaPredicted RBP7.25□□□□□ -1.25
HERPUD1-206ENST00000563343 SAE1Q9UBE0 346 aaPredicted RBP7.25□□□□□ -1.25
HERPUD1-206ENST00000563343 NENFQ9UMX5 172 aa7.25□□□□□ -1.25
HERPUD1-206ENST00000563343 CR1P17927 2039 aa7.25□□□□□ -1.25
HERPUD1-206ENST00000563343 IGKV1-8A0A0C4DH67 115 aa7.24□□□□□ -1.25
HERPUD1-206ENST00000563343 LRRD1A4D1F6 860 aa7.24□□□□□ -1.25
HERPUD1-206ENST00000563343 KRT87PA6NCN2 255 aa7.24□□□□□ -1.25
HERPUD1-206ENST00000563343 USP27XA6NNY8 438 aa7.24□□□□□ -1.25
HERPUD1-206ENST00000563343 RNF212BA8MTL3 300 aa7.24□□□□□ -1.25
HERPUD1-206ENST00000563343 ARHGEF33A8MVX0 844 aa7.24□□□□□ -1.25
HERPUD1-206ENST00000563343 P2RX6O15547 441 aa7.24□□□□□ -1.25
HERPUD1-206ENST00000563343 PRMT3O60678 531 aa7.24□□□□□ -1.25
HERPUD1-206ENST00000563343 CRLF1O75462 422 aa7.24□□□□□ -1.25
HERPUD1-206ENST00000563343 GPC4O75487 556 aa7.24□□□□□ -1.25
HERPUD1-206ENST00000563343 PDE9AO76083 593 aa7.24□□□□□ -1.25
HERPUD1-206ENST00000563343 FTH1P02794 183 aa7.24□□□□□ -1.25
HERPUD1-206ENST00000563343 ACVR2AP27037 513 aa7.24□□□□□ -1.25
HERPUD1-206ENST00000563343 TPP2P29144 1249 aaPredicted RBP7.24□□□□□ -1.25
HERPUD1-206ENST00000563343 TRHRP34981 398 aaPredicted RBP7.24□□□□□ -1.25
HERPUD1-206ENST00000563343 ITGA8P53708 1063 aa7.24□□□□□ -1.25
HERPUD1-206ENST00000563343 DYNLT1P63172 113 aa7.24□□□□□ -1.25
HERPUD1-206ENST00000563343 PLOD1Q02809 727 aaPredicted RBP7.24□□□□□ -1.25
HERPUD1-206ENST00000563343 SLC25A35Q3KQZ1 300 aa7.24□□□□□ -1.25
HERPUD1-206ENST00000563343 CCSMST1Q4G0I0 132 aa7.24□□□□□ -1.25
HERPUD1-206ENST00000563343 GXYLT1Q4G148 440 aa7.24□□□□□ -1.25
HERPUD1-206ENST00000563343 GARNL3Q5VVW2 1013 aa7.24□□□□□ -1.25
HERPUD1-206ENST00000563343 LRRC8BQ6P9F7 803 aa7.24□□□□□ -1.25
HERPUD1-206ENST00000563343 PAPD4Q6PIY7 484 aaKnown RBP7.24□□□□□ -1.25
HERPUD1-206ENST00000563343 PID1Q7Z2X4 250 aa7.24□□□□□ -1.25
HERPUD1-206ENST00000563343 SULF2Q8IWU5 870 aa7.24□□□□□ -1.25
HERPUD1-206ENST00000563343 ARMC10Q8N2F6 343 aa7.24□□□□□ -1.25
HERPUD1-206ENST00000563343 KIF2BQ8N4N8 673 aa7.24□□□□□ -1.25
HERPUD1-206ENST00000563343 SLC5A8Q8N695 610 aa7.24□□□□□ -1.25
HERPUD1-206ENST00000563343 RELL2Q8NC24 303 aaPredicted RBP7.24□□□□□ -1.25
HERPUD1-206ENST00000563343 OR5M3Q8NGP4 307 aa7.24□□□□□ -1.25
HERPUD1-206ENST00000563343 LKAAEAR1Q8TD35 194 aa7.24□□□□□ -1.25
HERPUD1-206ENST00000563343 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.24□□□□□ -1.25
HERPUD1-206ENST00000563343 FAM222BQ8WU58 562 aa7.24□□□□□ -1.25
HERPUD1-206ENST00000563343 TFB1MQ8WVM0 346 aaKnown RBP7.24□□□□□ -1.25
HERPUD1-206ENST00000563343 METTL21AQ8WXB1 218 aa7.24□□□□□ -1.25
HERPUD1-206ENST00000563343 DNAJC1Q96KC8 554 aaKnown RBP7.24□□□□□ -1.25
HERPUD1-206ENST00000563343 OR2A5Q96R48 311 aa7.24□□□□□ -1.25
HERPUD1-206ENST00000563343 SH3GL2Q99962 352 aa7.24□□□□□ -1.25
HERPUD1-206ENST00000563343 APOL2Q9BQE5 337 aa7.24□□□□□ -1.25
HERPUD1-206ENST00000563343 SARGQ9BW04 601 aa7.24□□□□□ -1.25
HERPUD1-206ENST00000563343 FSD1LQ9BXM9 530 aa7.24□□□□□ -1.25
HERPUD1-206ENST00000563343 DRC3Q9H069 523 aa7.24□□□□□ -1.25
HERPUD1-206ENST00000563343 SMARCAL1Q9NZC9 954 aa7.24□□□□□ -1.25
HERPUD1-206ENST00000563343 KLHL8Q9P2G9 620 aaPredicted RBP7.24□□□□□ -1.25
HERPUD1-206ENST00000563343 TRPS1Q9UHF7 1281 aa7.24□□□□□ -1.25
HERPUD1-206ENST00000563343 ANK2Q01484 3957 aa7.24□□□□□ -1.25
HERPUD1-206ENST00000563343 A0A087X0T9 212 aa7.23□□□□□ -1.25
HERPUD1-206ENST00000563343 FEZF1A0PJY2 475 aa7.23□□□□□ -1.25
HERPUD1-206ENST00000563343 SOWAHDA6NJG2 315 aa7.23□□□□□ -1.25
HERPUD1-206ENST00000563343 QSOX1O00391 747 aa7.23□□□□□ -1.25
HERPUD1-206ENST00000563343 SYT5O00445 386 aa7.23□□□□□ -1.25
HERPUD1-206ENST00000563343 WIPF1O43516 503 aa7.23□□□□□ -1.25
HERPUD1-206ENST00000563343 CRTAMO95727 393 aa7.23□□□□□ -1.25
HERPUD1-206ENST00000563343 ANXA5P08758 320 aa7.23□□□□□ -1.25
HERPUD1-206ENST00000563343 FAM228BP0C875 321 aa7.23□□□□□ -1.25
HERPUD1-206ENST00000563343 ERVK-10P10266 1014 aa7.23□□□□□ -1.25
HERPUD1-206ENST00000563343 ZFXP17010 805 aaPredicted RBP7.23□□□□□ -1.25
HERPUD1-206ENST00000563343 PSMA3P25788 255 aa7.23□□□□□ -1.25
HERPUD1-206ENST00000563343 CCR7P32248 378 aa7.23□□□□□ -1.25
HERPUD1-206ENST00000563343 PEX19P40855 299 aa7.23□□□□□ -1.25
HERPUD1-206ENST00000563343 TNNT3P45378 269 aaPredicted RBP7.23□□□□□ -1.25
HERPUD1-206ENST00000563343 CYB561P49447 251 aa7.23□□□□□ -1.25
HERPUD1-206ENST00000563343 AGTR2P50052 363 aa7.23□□□□□ -1.25
HERPUD1-206ENST00000563343 GEMP55040 296 aa7.23□□□□□ -1.25
HERPUD1-206ENST00000563343 CSE1LP55060 971 aaKnown RBP7.23□□□□□ -1.25
HERPUD1-206ENST00000563343 MLF1P58340 268 aa7.23□□□□□ -1.25
HERPUD1-206ENST00000563343 SLC26A5P58743 744 aa7.23□□□□□ -1.25
HERPUD1-206ENST00000563343 PPP2R2BQ00005 443 aa7.23□□□□□ -1.25
HERPUD1-206ENST00000563343 KRTAP1-1Q07627 177 aa7.23□□□□□ -1.25
HERPUD1-206ENST00000563343 FAM53BQ14153 422 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms