RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 BHLHB9Q6PI77 547 aa4.9□□□□□ -1.63
LINC00557-201ENST00000563184 PIWIL3Q7Z3Z3 882 aaKnown RBP4.9□□□□□ -1.63
LINC00557-201ENST00000563184 PIGWQ7Z7B1 504 aa4.9□□□□□ -1.63
LINC00557-201ENST00000563184 CREBRFQ8IUR6 639 aa4.9□□□□□ -1.63
LINC00557-201ENST00000563184 KLHL7Q8IXQ5 586 aa4.9□□□□□ -1.63
LINC00557-201ENST00000563184 DDHD1Q8NEL9 900 aa4.9□□□□□ -1.63
LINC00557-201ENST00000563184 DBF4BQ8NFT6 615 aa4.9□□□□□ -1.63
LINC00557-201ENST00000563184 NCOA7Q8NI08 942 aa4.9□□□□□ -1.63
LINC00557-201ENST00000563184 CTCFLQ8NI51 663 aaPredicted RBP4.9□□□□□ -1.63
LINC00557-201ENST00000563184 FIBINQ8TAL6 211 aa4.9□□□□□ -1.63
LINC00557-201ENST00000563184 GDAP1Q8TB36 358 aa4.9□□□□□ -1.63
LINC00557-201ENST00000563184 AZIN2Q96A70 460 aa4.9□□□□□ -1.63
LINC00557-201ENST00000563184 GMPPAQ96IJ6 420 aaPredicted RBP4.9□□□□□ -1.63
LINC00557-201ENST00000563184 RBM41Q96IZ5 413 aaKnown RBP4.9□□□□□ -1.63
LINC00557-201ENST00000563184 CDCA3Q99618 268 aaPredicted RBP4.9□□□□□ -1.63
LINC00557-201ENST00000563184 RBM4Q9BWF3 364 aaKnown RBP4.9□□□□□ -1.63
LINC00557-201ENST00000563184 COPS7BQ9H9Q2 264 aaPredicted RBP4.9□□□□□ -1.63
LINC00557-201ENST00000563184 PPANQ9NQ55 473 aaKnown RBP4.9□□□□□ -1.63
LINC00557-201ENST00000563184 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.9□□□□□ -1.63
LINC00557-201ENST00000563184 INTS10Q9NVR2 710 aaKnown RBP4.9□□□□□ -1.63
LINC00557-201ENST00000563184 IL16Q14005 1332 aa4.9□□□□□ -1.63
LINC00557-201ENST00000563184 OOEPA6NGQ2 149 aa4.89□□□□□ -1.63
LINC00557-201ENST00000563184 SLCO1B7G3V0H7 640 aa4.89□□□□□ -1.63
LINC00557-201ENST00000563184 ZNF195O14628 629 aa4.89□□□□□ -1.63
LINC00557-201ENST00000563184 EDIL3O43854 480 aa4.89□□□□□ -1.63
LINC00557-201ENST00000563184 KRT33AO76009 404 aa4.89□□□□□ -1.63
LINC00557-201ENST00000563184 C9P02748 559 aa4.89□□□□□ -1.63
LINC00557-201ENST00000563184 OR3A1P47881 315 aa4.89□□□□□ -1.63
LINC00557-201ENST00000563184 CSNK2BP67870 215 aa4.89□□□□□ -1.63
LINC00557-201ENST00000563184 TRIM29Q14134 588 aa4.89□□□□□ -1.63
LINC00557-201ENST00000563184 CCDC6Q16204 474 aa4.89□□□□□ -1.63
LINC00557-201ENST00000563184 ANKRD20A4Q4UJ75 823 aa4.89□□□□□ -1.63
LINC00557-201ENST00000563184 ANKRD20A8PQ5CZ79 823 aa4.89□□□□□ -1.63
LINC00557-201ENST00000563184 ANKRD20A2Q5SQ80 823 aa4.89□□□□□ -1.63
LINC00557-201ENST00000563184 SPOUT1Q5T280 376 aaKnown RBP4.89□□□□□ -1.63
LINC00557-201ENST00000563184 ANKRD20A1Q5TYW2 823 aa4.89□□□□□ -1.63
LINC00557-201ENST00000563184 ANKRD20A3Q5VUR7 823 aa4.89□□□□□ -1.63
LINC00557-201ENST00000563184 FAM46CQ5VWP2 391 aa4.89□□□□□ -1.63
LINC00557-201ENST00000563184 OR4C11Q6IEV9 310 aa4.89□□□□□ -1.63
LINC00557-201ENST00000563184 ZNF770Q6IQ21 691 aaPredicted RBP4.89□□□□□ -1.63
LINC00557-201ENST00000563184 PWWP2BQ6NUJ5 590 aa4.89□□□□□ -1.63
LINC00557-201ENST00000563184 C11orf88Q6PI97 169 aa4.89□□□□□ -1.63
LINC00557-201ENST00000563184 Q6ZSR9 355 aa4.89□□□□□ -1.63
LINC00557-201ENST00000563184 CCDC60Q8IWA6 550 aaPredicted RBP4.89□□□□□ -1.63
LINC00557-201ENST00000563184 NIPA2Q8N8Q9 360 aa4.89□□□□□ -1.63
LINC00557-201ENST00000563184 AMER3Q8N944 861 aa4.89□□□□□ -1.63
LINC00557-201ENST00000563184 CCDC63Q8NA47 563 aa4.89□□□□□ -1.63
LINC00557-201ENST00000563184 OR10G8Q8NGN5 311 aa4.89□□□□□ -1.63
LINC00557-201ENST00000563184 GATAD1Q8WUU5 269 aa4.89□□□□□ -1.63
LINC00557-201ENST00000563184 METTL21AQ8WXB1 218 aa4.89□□□□□ -1.63
LINC00557-201ENST00000563184 ATP6V1E2Q96A05 226 aa4.89□□□□□ -1.63
LINC00557-201ENST00000563184 SGF29Q96ES7 293 aa4.89□□□□□ -1.63
LINC00557-201ENST00000563184 AK8Q96MA6 479 aa4.89□□□□□ -1.63
LINC00557-201ENST00000563184 LPAR4Q99677 370 aa4.89□□□□□ -1.63
LINC00557-201ENST00000563184 FUCA2Q9BTY2 467 aa4.89□□□□□ -1.63
LINC00557-201ENST00000563184 PITPNM3Q9BZ71 974 aa4.89□□□□□ -1.63
LINC00557-201ENST00000563184 EGLN3Q9H6Z9 239 aa4.89□□□□□ -1.63
LINC00557-201ENST00000563184 ATAD3AQ9NVI7 634 aa4.89□□□□□ -1.63
LINC00557-201ENST00000563184 SEPT10Q9P0V9 454 aa4.89□□□□□ -1.63
LINC00557-201ENST00000563184 ARMCX3Q9UH62 379 aaPredicted RBP4.89□□□□□ -1.63
LINC00557-201ENST00000563184 IGSF1Q8N6C5 1336 aa4.89□□□□□ -1.63
LINC00557-201ENST00000563184 A0A087WUV0 522 aaPredicted RBP4.88□□□□□ -1.63
LINC00557-201ENST00000563184 A0A0U1RQK1 487 aa4.88□□□□□ -1.63
LINC00557-201ENST00000563184 ZNF320A2RRD8 509 aa4.88□□□□□ -1.63
LINC00557-201ENST00000563184 MEIOCA2RUB1 952 aa4.88□□□□□ -1.63
LINC00557-201ENST00000563184 TMEM150CB9EJG8 249 aa4.88□□□□□ -1.63
LINC00557-201ENST00000563184 NR5A2O00482 541 aa4.88□□□□□ -1.63
LINC00557-201ENST00000563184 PSMA7O14818 248 aa4.88□□□□□ -1.63
LINC00557-201ENST00000563184 TEX28O15482 410 aa4.88□□□□□ -1.63
LINC00557-201ENST00000563184 STX6O43752 255 aa4.88□□□□□ -1.63
LINC00557-201ENST00000563184 ZG16O60844 167 aa4.88□□□□□ -1.63
LINC00557-201ENST00000563184 ZFAND5O76080 213 aa4.88□□□□□ -1.63
LINC00557-201ENST00000563184 MOCS2O96007 188 aaPredicted RBP4.88□□□□□ -1.63
LINC00557-201ENST00000563184 DLATP10515 647 aaKnown RBP4.88□□□□□ -1.63
LINC00557-201ENST00000563184 SLC2A2P11168 524 aaPredicted RBP4.88□□□□□ -1.63
LINC00557-201ENST00000563184 CTNNA1P35221 906 aaKnown RBP4.88□□□□□ -1.63
LINC00557-201ENST00000563184 SFTPDP35247 375 aa4.88□□□□□ -1.63
LINC00557-201ENST00000563184 FOLH1Q04609 750 aa4.88□□□□□ -1.63
LINC00557-201ENST00000563184 YWHAHQ04917 246 aaPredicted RBP4.88□□□□□ -1.63
LINC00557-201ENST00000563184 IL10RBQ08334 325 aa4.88□□□□□ -1.63
LINC00557-201ENST00000563184 ITGA9Q13797 1035 aa4.88□□□□□ -1.63
LINC00557-201ENST00000563184 HNRNPDQ14103 355 aaKnown RBP4.88□□□□□ -1.63
LINC00557-201ENST00000563184 GBP6Q6ZN66 633 aa4.88□□□□□ -1.63
LINC00557-201ENST00000563184 GPR141Q7Z602 305 aa4.88□□□□□ -1.63
LINC00557-201ENST00000563184 PTAR1Q7Z6K3 402 aaPredicted RBP4.88□□□□□ -1.63
LINC00557-201ENST00000563184 HOOK3Q86VS8 718 aa4.88□□□□□ -1.63
LINC00557-201ENST00000563184 GPRC5AQ8NFJ5 357 aa4.88□□□□□ -1.63
LINC00557-201ENST00000563184 SPATA3Q8NHX4 192 aa4.88□□□□□ -1.63
LINC00557-201ENST00000563184 NECTIN4Q96NY8 510 aa4.88□□□□□ -1.63
LINC00557-201ENST00000563184 BTBD9Q96Q07 612 aa4.88□□□□□ -1.63
LINC00557-201ENST00000563184 FAM49AQ9H0Q0 323 aaPredicted RBP4.88□□□□□ -1.63
LINC00557-201ENST00000563184 WDR13Q9H1Z4 485 aa4.88□□□□□ -1.63
LINC00557-201ENST00000563184 TUFT1Q9NNX1 390 aa4.88□□□□□ -1.63
LINC00557-201ENST00000563184 MDFICQ9P1T7 246 aa4.88□□□□□ -1.63
LINC00557-201ENST00000563184 PRDM4Q9UKN5 801 aa4.88□□□□□ -1.63
LINC00557-201ENST00000563184 RUVBL2Q9Y230 463 aaKnown RBP4.88□□□□□ -1.63
LINC00557-201ENST00000563184 WDR37Q9Y2I8 494 aa4.88□□□□□ -1.63
LINC00557-201ENST00000563184 MRPS28Q9Y2Q9 187 aaKnown RBP4.88□□□□□ -1.63
LINC00557-201ENST00000563184 HBS1LQ9Y450 684 aaKnown RBP4.88□□□□□ -1.63
LINC00557-201ENST00000563184 ANGPTL3Q9Y5C1 460 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms