RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 CSNK1G2P78368 415 aa13.73□□□□□ -0.21
COMMD4-205ENST00000562310 HHEXQ03014 270 aa13.73□□□□□ -0.21
COMMD4-205ENST00000562310 ACSM2AQ08AH3 577 aa13.73□□□□□ -0.21
COMMD4-205ENST00000562310 CUL3Q13618 768 aa13.73□□□□□ -0.21
COMMD4-205ENST00000562310 SF1Q15637 639 aaKnown RBP13.73□□□□□ -0.21
COMMD4-205ENST00000562310 RFTN2Q52LD8 501 aaPredicted RBP13.73□□□□□ -0.21
COMMD4-205ENST00000562310 COQ5Q5HYK3 327 aa13.73□□□□□ -0.21
COMMD4-205ENST00000562310 ACSM2BQ68CK6 577 aa13.73□□□□□ -0.21
COMMD4-205ENST00000562310 PAOXQ6QHF9 649 aa13.73□□□□□ -0.21
COMMD4-205ENST00000562310 RINLQ6ZS11 566 aa13.73□□□□□ -0.21
COMMD4-205ENST00000562310 GK5Q6ZS86 529 aa13.73□□□□□ -0.21
COMMD4-205ENST00000562310 BMP8AQ7Z5Y6 402 aa13.73□□□□□ -0.21
COMMD4-205ENST00000562310 FBXL6Q8N531 539 aa13.73□□□□□ -0.21
COMMD4-205ENST00000562310 GLB1L3Q8NCI6 653 aaPredicted RBP13.73□□□□□ -0.21
COMMD4-205ENST00000562310 RBM15BQ8NDT2 890 aaKnown RBP13.73□□□□□ -0.21
COMMD4-205ENST00000562310 NELL1Q92832 810 aa13.73□□□□□ -0.21
COMMD4-205ENST00000562310 ZC3H10Q96K80 434 aaKnown RBP13.73□□□□□ -0.21
COMMD4-205ENST00000562310 MRPL1Q9BYD6 325 aaKnown RBP13.73□□□□□ -0.21
COMMD4-205ENST00000562310 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.73□□□□□ -0.21
COMMD4-205ENST00000562310 EFCAB1Q9HAE3 211 aa13.73□□□□□ -0.21
COMMD4-205ENST00000562310 SIRT5Q9NXA8 310 aa13.73□□□□□ -0.21
COMMD4-205ENST00000562310 TAS2R1Q9NYW7 299 aa13.73□□□□□ -0.21
COMMD4-205ENST00000562310 CCDC167Q9P0B6 97 aa13.73□□□□□ -0.21
COMMD4-205ENST00000562310 MAPRE3Q9UPY8 281 aa13.73□□□□□ -0.21
COMMD4-205ENST00000562310 PCDHGA2Q9Y5H1 932 aa13.73□□□□□ -0.21
COMMD4-205ENST00000562310 TRIOO75962 3097 aa13.72□□□□□ -0.21
COMMD4-205ENST00000562310 TRBV23OR9-2A0A075B6M9 112 aa13.72□□□□□ -0.21
COMMD4-205ENST00000562310 LOC100653049A0A140TA62 436 aa13.72□□□□□ -0.21
COMMD4-205ENST00000562310 A0A1B0GVT2 93 aa13.72□□□□□ -0.21
COMMD4-205ENST00000562310 ANKDD1BA6NHY2 528 aa13.72□□□□□ -0.21
COMMD4-205ENST00000562310 LILRA5A6NI73 299 aa13.72□□□□□ -0.21
COMMD4-205ENST00000562310 MAGEB17A8MXT2 336 aa13.72□□□□□ -0.21
COMMD4-205ENST00000562310 C2orf74A8MZ97 194 aa13.72□□□□□ -0.21
COMMD4-205ENST00000562310 H7BY64 318 aa13.72□□□□□ -0.21
COMMD4-205ENST00000562310 TNFRSF10AO00220 468 aa13.72□□□□□ -0.21
COMMD4-205ENST00000562310 NR5A2O00482 541 aa13.72□□□□□ -0.21
COMMD4-205ENST00000562310 YY2O15391 372 aa13.72□□□□□ -0.21
COMMD4-205ENST00000562310 YKT6O15498 198 aa13.72□□□□□ -0.21
COMMD4-205ENST00000562310 KRT34O76011 436 aa13.72□□□□□ -0.21
COMMD4-205ENST00000562310 SEMA3DO95025 777 aa13.72□□□□□ -0.21
COMMD4-205ENST00000562310 KRT16P08779 473 aa13.72□□□□□ -0.21
COMMD4-205ENST00000562310 G6PDP11413 515 aa13.72□□□□□ -0.21
COMMD4-205ENST00000562310 AMD1P17707 334 aa13.72□□□□□ -0.21
COMMD4-205ENST00000562310 PTX3P26022 381 aaPredicted RBP13.72□□□□□ -0.21
COMMD4-205ENST00000562310 ARRB1P49407 418 aaPredicted RBP13.72□□□□□ -0.21
COMMD4-205ENST00000562310 CLNS1AP54105 237 aaKnown RBP13.72□□□□□ -0.21
COMMD4-205ENST00000562310 RPS13P62277 151 aaKnown RBP13.72□□□□□ -0.21
COMMD4-205ENST00000562310 SIM2Q14190 667 aaPredicted RBP13.72□□□□□ -0.21
COMMD4-205ENST00000562310 RCAN2Q14206 197 aa13.72□□□□□ -0.21
COMMD4-205ENST00000562310 KIAA0040Q15053 153 aa13.72□□□□□ -0.21
COMMD4-205ENST00000562310 RBBP5Q15291 538 aaKnown RBP13.72□□□□□ -0.21
COMMD4-205ENST00000562310 SLC5A12Q1EHB4 618 aa13.72□□□□□ -0.21
COMMD4-205ENST00000562310 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.72□□□□□ -0.21
COMMD4-205ENST00000562310 PEAR1Q5VY43 1037 aaPredicted RBP13.72□□□□□ -0.21
COMMD4-205ENST00000562310 KLHL35Q6PF15 583 aa13.72□□□□□ -0.21
COMMD4-205ENST00000562310 BLOC1S3Q6QNY0 202 aa13.72□□□□□ -0.21
COMMD4-205ENST00000562310 C16orf89Q6UX73 402 aa13.72□□□□□ -0.21
COMMD4-205ENST00000562310 CEP68Q76N32 757 aa13.72□□□□□ -0.21
COMMD4-205ENST00000562310 ADCK2Q7Z695 626 aa13.72□□□□□ -0.21
COMMD4-205ENST00000562310 OOSP2Q86WS3 158 aa13.72□□□□□ -0.21
COMMD4-205ENST00000562310 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.72□□□□□ -0.21
COMMD4-205ENST00000562310 LIX1Q8N485 282 aa13.72□□□□□ -0.21
COMMD4-205ENST00000562310 KYQ8NBH2 561 aa13.72□□□□□ -0.21
COMMD4-205ENST00000562310 PATE1Q8WXA2 126 aa13.72□□□□□ -0.21
COMMD4-205ENST00000562310 STARD8Q92502 1023 aa13.72□□□□□ -0.21
COMMD4-205ENST00000562310 MCUR1Q96AQ8 359 aa13.72□□□□□ -0.21
COMMD4-205ENST00000562310 RCN3Q96D15 328 aa13.72□□□□□ -0.21
COMMD4-205ENST00000562310 PRAP1Q96NZ9 151 aa13.72□□□□□ -0.21
COMMD4-205ENST00000562310 NRTNQ99748 197 aa13.72□□□□□ -0.21
COMMD4-205ENST00000562310 SARGQ9BW04 601 aa13.72□□□□□ -0.21
COMMD4-205ENST00000562310 TBC1D10AQ9BXI6 508 aa13.72□□□□□ -0.21
COMMD4-205ENST00000562310 SPNS1Q9H2V7 528 aa13.72□□□□□ -0.21
COMMD4-205ENST00000562310 MMADHCQ9H3L0 296 aaPredicted RBP13.72□□□□□ -0.21
COMMD4-205ENST00000562310 SLC6A20Q9NP91 592 aa13.72□□□□□ -0.21
COMMD4-205ENST00000562310 ZSCAN32Q9NX65 697 aa13.72□□□□□ -0.21
COMMD4-205ENST00000562310 SPHK1Q9NYA1 384 aa13.72□□□□□ -0.21
COMMD4-205ENST00000562310 PILRBQ9UKJ0 227 aa13.72□□□□□ -0.21
COMMD4-205ENST00000562310 NDUFAF1Q9Y375 327 aa13.72□□□□□ -0.21
COMMD4-205ENST00000562310 TMEM131Q92545 1883 aa13.72□□□□□ -0.21
COMMD4-205ENST00000562310 OR6C74A6NCV1 312 aa13.71□□□□□ -0.21
COMMD4-205ENST00000562310 H0YHG0 523 aa13.71□□□□□ -0.21
COMMD4-205ENST00000562310 BTN3A3O00478 584 aa13.71□□□□□ -0.21
COMMD4-205ENST00000562310 ANGPT2O15123 496 aa13.71□□□□□ -0.21
COMMD4-205ENST00000562310 PRMT3O60678 531 aa13.71□□□□□ -0.21
COMMD4-205ENST00000562310 CLEC3AO75596 197 aa13.71□□□□□ -0.21
COMMD4-205ENST00000562310 BCKDHAP12694 445 aa13.71□□□□□ -0.21
COMMD4-205ENST00000562310 AHRP35869 848 aa13.71□□□□□ -0.21
COMMD4-205ENST00000562310 CPOXP36551 454 aa13.71□□□□□ -0.21
COMMD4-205ENST00000562310 ASMTP46597 345 aa13.71□□□□□ -0.21
COMMD4-205ENST00000562310 RXRGP48443 463 aa13.71□□□□□ -0.21
COMMD4-205ENST00000562310 NUDT2P50583 147 aa13.71□□□□□ -0.21
COMMD4-205ENST00000562310 POLR2JP52435 117 aaKnown RBP13.71□□□□□ -0.21
COMMD4-205ENST00000562310 MEF2AQ02078 507 aaPredicted RBP13.71□□□□□ -0.21
COMMD4-205ENST00000562310 MMEL1Q495T6 779 aa13.71□□□□□ -0.21
COMMD4-205ENST00000562310 ZNF425Q6IV72 752 aa13.71□□□□□ -0.21
COMMD4-205ENST00000562310 OGFOD3Q6PK18 319 aa13.71□□□□□ -0.21
COMMD4-205ENST00000562310 HACD2Q6Y1H2 254 aa13.71□□□□□ -0.21
COMMD4-205ENST00000562310 C17orf82Q86X59 251 aaPredicted RBP13.71□□□□□ -0.21
COMMD4-205ENST00000562310 SYT12Q8IV01 421 aa13.71□□□□□ -0.21
COMMD4-205ENST00000562310 FUNDC1Q8IVP5 155 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms