RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 CD33P20138 364 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 KELP23276 732 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 CCND1P24385 295 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 MAT2AP31153 395 aaKnown RBP6.3□□□□□ -1.4
CAPN3-210ENST00000561817 GCKP35557 465 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 HNF4AP41235 474 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 TSPAN7P41732 249 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 GNPDA1P46926 289 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 KRT6CP48668 564 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 CCR5P51681 352 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 CLCNKAP51800 687 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 PNLIPRP1P54315 467 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 CLDN2P57739 230 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 STX1BP61266 288 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 PSME3P61289 254 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 TBPL1P62380 186 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 MXRA7P84157 204 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 MS4A2Q01362 244 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 IRF8Q02556 426 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 COL9A2Q14055 689 aaPredicted RBP6.3□□□□□ -1.4
CAPN3-210ENST00000561817 NFATC4Q14934 902 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 ARHGAP19Q14CB8 494 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 CPSF6Q16630 551 aaKnown RBP eCLIP6.3□□□□□ -1.4
CAPN3-210ENST00000561817 C21orf62-AS1Q17RA5 79 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 KIF19Q2TAC6 998 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 VPS26BQ4G0F5 336 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 USP39Q53GS9 565 aaKnown RBP6.3□□□□□ -1.4
CAPN3-210ENST00000561817 PAGE3Q5JUK9 113 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 TMEM31Q5JXX7 168 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 WDR45BQ5MNZ6 344 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 IL23RQ5VWK5 629 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 ATG9BQ674R7 924 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 TBC1D3GQ6DHY5 549 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 TBC1D3CQ6IPX1 549 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 ADNP2Q6IQ32 1131 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 MZT2AQ6P582 158 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 KIAA1324Q6UXG2 1013 aaKnown RBP6.3□□□□□ -1.4
CAPN3-210ENST00000561817 BNC2Q6ZN30 1099 aaPredicted RBP6.3□□□□□ -1.4
CAPN3-210ENST00000561817 RNF111Q6ZNA4 994 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 SYT13Q7L8C5 426 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 FAM124AQ86V42 546 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 FAM129CQ86XR2 697 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 DCUN1D3Q8IWE4 304 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 RIMKLAQ8IXN7 391 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 LAS2Q8IYD9 372 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 UBALD2Q8IYN6 164 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 TBC1D3Q8IZP1 549 aaPredicted RBP6.3□□□□□ -1.4
CAPN3-210ENST00000561817 ZNF295-AS1Q8N0V1 137 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 RNF175Q8N4F7 328 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 DPP10Q8N608 796 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 FNDC5Q8NAU1 212 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 OR5K2Q8NHB8 316 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 SETD7Q8WTS6 366 aaKnown RBP6.3□□□□□ -1.4
CAPN3-210ENST00000561817 JPH3Q8WXH2 748 aaPredicted RBP6.3□□□□□ -1.4
CAPN3-210ENST00000561817 OR1E3Q8WZA6 343 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 TFGQ92734 400 aaPredicted RBP6.3□□□□□ -1.4
CAPN3-210ENST00000561817 NINJ1Q92982 152 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 NEIL2Q969S2 332 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 ROPN1LQ96C74 230 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 SPDL1Q96EA4 605 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 CMTM7Q96FZ5 175 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 TMEM74Q96NL1 305 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 IL17FQ96PD4 163 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 CDRT15Q96T59 188 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 C1QTNF7Q9BXJ2 289 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 MRPL1Q9BYD6 325 aaKnown RBP6.3□□□□□ -1.4
CAPN3-210ENST00000561817 FOXQ1Q9C009 403 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 SAP130Q9H0E3 1048 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 SPNS1Q9H2V7 528 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 EHD1Q9H4M9 534 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 TBC1D17Q9HA65 648 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 LRTM1Q9HBL6 345 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 SGK2Q9HBY8 427 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 MRPL40Q9NQ50 206 aaKnown RBP6.3□□□□□ -1.4
CAPN3-210ENST00000561817 GPR27Q9NS67 375 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 C1orf109Q9NX04 203 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 NDE1Q9NXR1 346 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 ABCD2Q9UBJ2 740 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 PACSIN3Q9UKS6 424 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 ACSL5Q9ULC5 683 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 SUFUQ9UMX1 484 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 SNX6Q9UNH7 406 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 NCKAP1Q9Y2A7 1128 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 CA5BQ9Y2D0 317 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 DLGAP4Q9Y2H0 992 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 NDUFAF1Q9Y375 327 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 TSC22D4Q9Y3Q8 395 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 POLR3HQ9Y535 204 aaPredicted RBP6.3□□□□□ -1.4
CAPN3-210ENST00000561817 PLXND1Q9Y4D7 1925 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 KANSL1LA0AUZ9 987 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 PRSS38A1L453 326 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 A6NCN8 305 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 PRORSD1PA6NEY8 169 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 TMEM221A6NGB7 291 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 H0Y8X5 98 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 H3BNX3 289 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 M0R296 226 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 CACNB4O00305 520 aaPredicted RBP6.29□□□□□ -1.4
CAPN3-210ENST00000561817 TNFRSF10CO14798 259 aa6.29□□□□□ -1.4
CAPN3-210ENST00000561817 SMAD7O15105 426 aaKnown RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms