RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 ASB7Q9H672 318 aa7.05□□□□□ -1.28
CDH1-203ENST00000561751 MINDY3Q9H8M7 445 aa7.05□□□□□ -1.28
CDH1-203ENST00000561751 AKTIPQ9H8T0 292 aa7.05□□□□□ -1.28
CDH1-203ENST00000561751 SMURF2Q9HAU4 748 aa7.05□□□□□ -1.28
CDH1-203ENST00000561751 KMT5AQ9NQR1 393 aa7.05□□□□□ -1.28
CDH1-203ENST00000561751 RASSF1Q9NS23 344 aa7.05□□□□□ -1.28
CDH1-203ENST00000561751 KRT84Q9NSB2 600 aa7.05□□□□□ -1.28
CDH1-203ENST00000561751 ERVK13-1Q9NX77 482 aa7.05□□□□□ -1.28
CDH1-203ENST00000561751 DPP3Q9NY33 737 aa7.05□□□□□ -1.28
CDH1-203ENST00000561751 SH3BP4Q9P0V3 963 aa7.05□□□□□ -1.28
CDH1-203ENST00000561751 XPR1Q9UBH6 696 aa7.05□□□□□ -1.28
CDH1-203ENST00000561751 CPNE7Q9UBL6 633 aa7.05□□□□□ -1.28
CDH1-203ENST00000561751 EXTL2Q9UBQ6 330 aa7.05□□□□□ -1.28
CDH1-203ENST00000561751 PNMA8BQ9ULN7 279 aaPredicted RBP7.05□□□□□ -1.28
CDH1-203ENST00000561751 MRPS7Q9Y2R9 242 aaKnown RBP7.05□□□□□ -1.28
CDH1-203ENST00000561751 DERAQ9Y315 318 aa7.05□□□□□ -1.28
CDH1-203ENST00000561751 MAGED1Q9Y5V3 778 aaPredicted RBP7.05□□□□□ -1.28
CDH1-203ENST00000561751 ALG5Q9Y673 324 aa7.05□□□□□ -1.28
CDH1-203ENST00000561751 COL4A5P29400 1685 aa7.05□□□□□ -1.28
CDH1-203ENST00000561751 COL1A2P08123 1366 aa7.05□□□□□ -1.28
CDH1-203ENST00000561751 GREB1LQ9C091 1923 aaPredicted RBP7.04□□□□□ -1.28
CDH1-203ENST00000561751 A0A0B4J293 547 aa7.04□□□□□ -1.28
CDH1-203ENST00000561751 E2F8A0AVK6 867 aa7.04□□□□□ -1.28
CDH1-203ENST00000561751 FABP12A6NFH5 140 aa7.04□□□□□ -1.28
CDH1-203ENST00000561751 DBX1A6NMT0 343 aa7.04□□□□□ -1.28
CDH1-203ENST00000561751 A8MV72 311 aaPredicted RBP7.04□□□□□ -1.28
CDH1-203ENST00000561751 TISP43B9A030 160 aa7.04□□□□□ -1.28
CDH1-203ENST00000561751 AIPO00170 330 aa7.04□□□□□ -1.28
CDH1-203ENST00000561751 PLA2G10O15496 165 aa7.04□□□□□ -1.28
CDH1-203ENST00000561751 SSX4O60224 188 aa7.04□□□□□ -1.28
CDH1-203ENST00000561751 KIAA0513O60268 411 aa7.04□□□□□ -1.28
CDH1-203ENST00000561751 MPZL2O60487 215 aa7.04□□□□□ -1.28
CDH1-203ENST00000561751 SLC22A3O75751 556 aa7.04□□□□□ -1.28
CDH1-203ENST00000561751 OR4F21O95013 312 aa7.04□□□□□ -1.28
CDH1-203ENST00000561751 FADS2O95864 444 aaKnown RBP7.04□□□□□ -1.28
CDH1-203ENST00000561751 GLUD1P00367 558 aa7.04□□□□□ -1.28
CDH1-203ENST00000561751 CALCAP01258 141 aa7.04□□□□□ -1.28
CDH1-203ENST00000561751 RB1P06400 928 aa7.04□□□□□ -1.28
CDH1-203ENST00000561751 CSF3P09919 207 aa7.04□□□□□ -1.28
CDH1-203ENST00000561751 ACSM4P0C7M7 580 aa7.04□□□□□ -1.28
CDH1-203ENST00000561751 PIPP12273 146 aaPredicted RBP7.04□□□□□ -1.28
CDH1-203ENST00000561751 ANXA3P12429 323 aa7.04□□□□□ -1.28
CDH1-203ENST00000561751 PEPDP12955 493 aa7.04□□□□□ -1.28
CDH1-203ENST00000561751 IFI30P13284 250 aa7.04□□□□□ -1.28
CDH1-203ENST00000561751 ARSBP15848 533 aa7.04□□□□□ -1.28
CDH1-203ENST00000561751 MAGP20916 626 aa7.04□□□□□ -1.28
CDH1-203ENST00000561751 FPR1P21462 350 aa7.04□□□□□ -1.28
CDH1-203ENST00000561751 RPS3P23396 243 aaKnown RBP eCLIP7.04□□□□□ -1.28
CDH1-203ENST00000561751 MAPK1P28482 360 aa7.04□□□□□ -1.28
CDH1-203ENST00000561751 HOXA6P31267 233 aa7.04□□□□□ -1.28
CDH1-203ENST00000561751 DNAJA1P31689 397 aaKnown RBP7.04□□□□□ -1.28
CDH1-203ENST00000561751 HNF1BP35680 557 aa7.04□□□□□ -1.28
CDH1-203ENST00000561751 MATKP42679 507 aa7.04□□□□□ -1.28
CDH1-203ENST00000561751 HSPA7P48741 367 aa7.04□□□□□ -1.28
CDH1-203ENST00000561751 VEGFCP49767 419 aa7.04□□□□□ -1.28
CDH1-203ENST00000561751 JAK3P52333 1124 aa7.04□□□□□ -1.28
CDH1-203ENST00000561751 DHODHQ02127 395 aa7.04□□□□□ -1.28
CDH1-203ENST00000561751 ZNF33AQ06730 810 aa7.04□□□□□ -1.28
CDH1-203ENST00000561751 PRKG2Q13237 762 aa7.04□□□□□ -1.28
CDH1-203ENST00000561751 PWP1Q13610 501 aa7.04□□□□□ -1.28
CDH1-203ENST00000561751 EXOSC2Q13868 293 aaKnown RBP7.04□□□□□ -1.28
CDH1-203ENST00000561751 DGCR6Q14129 220 aa7.04□□□□□ -1.28
CDH1-203ENST00000561751 GRM3Q14832 879 aa7.04□□□□□ -1.28
CDH1-203ENST00000561751 ZNF124Q15973 351 aa7.04□□□□□ -1.28
CDH1-203ENST00000561751 TRIM60Q495X7 471 aa7.04□□□□□ -1.28
CDH1-203ENST00000561751 TECRLQ5HYJ1 363 aa7.04□□□□□ -1.28
CDH1-203ENST00000561751 PITRM1Q5JRX3 1037 aa7.04□□□□□ -1.28
CDH1-203ENST00000561751 NHLRC3Q5JS37 347 aa7.04□□□□□ -1.28
CDH1-203ENST00000561751 NOL9Q5SY16 702 aaKnown RBP7.04□□□□□ -1.28
CDH1-203ENST00000561751 SAMD5Q5TGI4 173 aa7.04□□□□□ -1.28
CDH1-203ENST00000561751 ZNF468Q5VIY5 522 aaPredicted RBP7.04□□□□□ -1.28
CDH1-203ENST00000561751 CPZQ66K79 652 aa7.04□□□□□ -1.28
CDH1-203ENST00000561751 ATG9BQ674R7 924 aa7.04□□□□□ -1.28
CDH1-203ENST00000561751 OR4F3Q6IEY1 312 aa7.04□□□□□ -1.28
CDH1-203ENST00000561751 RGS7BPQ6MZT1 257 aaPredicted RBP7.04□□□□□ -1.28
CDH1-203ENST00000561751 DENND1BQ6P3S1 775 aa7.04□□□□□ -1.28
CDH1-203ENST00000561751 SLC39A4Q6P5W5 647 aa7.04□□□□□ -1.28
CDH1-203ENST00000561751 LRFN4Q6PJG9 635 aa7.04□□□□□ -1.28
CDH1-203ENST00000561751 KDELC1Q6UW63 502 aa7.04□□□□□ -1.28
CDH1-203ENST00000561751 CYHR1Q6ZMK1 362 aa7.04□□□□□ -1.28
CDH1-203ENST00000561751 KCTD1Q719H9 257 aa7.04□□□□□ -1.28
CDH1-203ENST00000561751 PDZD4Q76G19 769 aaPredicted RBP7.04□□□□□ -1.28
CDH1-203ENST00000561751 DET1Q7L5Y6 550 aa7.04□□□□□ -1.28
CDH1-203ENST00000561751 GPR149Q86SP6 731 aa7.04□□□□□ -1.28
CDH1-203ENST00000561751 JAZF1Q86VZ6 243 aa7.04□□□□□ -1.28
CDH1-203ENST00000561751 C12orf40Q86WS4 652 aa7.04□□□□□ -1.28
CDH1-203ENST00000561751 NAXDQ8IW45 347 aa7.04□□□□□ -1.28
CDH1-203ENST00000561751 DNAJC22Q8N4W6 341 aa7.04□□□□□ -1.28
CDH1-203ENST00000561751 TAB3Q8N5C8 712 aaPredicted RBP7.04□□□□□ -1.28
CDH1-203ENST00000561751 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.04□□□□□ -1.28
CDH1-203ENST00000561751 C19orf18Q8NEA5 215 aa7.04□□□□□ -1.28
CDH1-203ENST00000561751 OR1M1Q8NGA1 313 aa7.04□□□□□ -1.28
CDH1-203ENST00000561751 WDR36Q8NI36 951 aaKnown RBP7.04□□□□□ -1.28
CDH1-203ENST00000561751 CNIH3Q8TBE1 160 aa7.04□□□□□ -1.28
CDH1-203ENST00000561751 AGR3Q8TD06 166 aa7.04□□□□□ -1.28
CDH1-203ENST00000561751 ELP5Q8TE02 316 aa7.04□□□□□ -1.28
CDH1-203ENST00000561751 ADAMTS14Q8WXS8 1223 aa7.04□□□□□ -1.28
CDH1-203ENST00000561751 RHBDF1Q96CC6 855 aa7.04□□□□□ -1.28
CDH1-203ENST00000561751 ACSF2Q96CM8 615 aaPredicted RBP7.04□□□□□ -1.28
CDH1-203ENST00000561751 RNF31Q96EP0 1072 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms