RNA–Protein interactions for RNA: ENST00000561707.1

COTL1-202, Transcript of coactosin like F-actin binding protein 1, humanhuman

TSL 1 (best)

Gene COTL1, Length 781 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COTL1-202ENST00000561707 FAM92BQ6ZTR7 304 aa12.32□□□□□ -0.44
COTL1-202ENST00000561707 EFL1Q7Z2Z2 1120 aaKnown RBP12.32□□□□□ -0.44
COTL1-202ENST00000561707 VN1R5Q7Z5H4 357 aa12.32□□□□□ -0.44
COTL1-202ENST00000561707 ALYREFQ86V81 257 aaKnown RBP12.32□□□□□ -0.44
COTL1-202ENST00000561707 LAS2Q8IYD9 372 aa12.32□□□□□ -0.44
COTL1-202ENST00000561707 CACNA2D3Q8IZS8 1091 aa12.32□□□□□ -0.44
COTL1-202ENST00000561707 KIRREL3Q8IZU9 778 aa12.32□□□□□ -0.44
COTL1-202ENST00000561707 HUS1BQ8NHY5 278 aa12.32□□□□□ -0.44
COTL1-202ENST00000561707 FRG2BQ96QU4 278 aa12.32□□□□□ -0.44
COTL1-202ENST00000561707 MTERF1Q99551 399 aaKnown RBP12.32□□□□□ -0.44
COTL1-202ENST00000561707 MAP3K3Q99759 626 aa12.32□□□□□ -0.44
COTL1-202ENST00000561707 PLCD4Q9BRC7 762 aa12.32□□□□□ -0.44
COTL1-202ENST00000561707 EFCAB11Q9BUY7 163 aa12.32□□□□□ -0.44
COTL1-202ENST00000561707 ELOVL6Q9H5J4 265 aa12.32□□□□□ -0.44
COTL1-202ENST00000561707 SYNPO2LQ9H987 977 aa12.32□□□□□ -0.44
COTL1-202ENST00000561707 NCDNQ9UBB6 729 aa12.32□□□□□ -0.44
COTL1-202ENST00000561707 POMT2Q9UKY4 750 aa12.32□□□□□ -0.44
COTL1-202ENST00000561707 SNX7Q9UNH6 387 aa12.32□□□□□ -0.44
COTL1-202ENST00000561707 CCL27Q9Y4X3 112 aa12.32□□□□□ -0.44
COTL1-202ENST00000561707 PCDHGB2Q9Y5G2 931 aa12.32□□□□□ -0.44
COTL1-202ENST00000561707 PCDHGA11Q9Y5H2 935 aa12.32□□□□□ -0.44
COTL1-202ENST00000561707 EME2A4GXA9 379 aaPredicted RBP12.31□□□□□ -0.44
COTL1-202ENST00000561707 SLC9B1P1A6NJY1 282 aa12.31□□□□□ -0.44
COTL1-202ENST00000561707 MAGEB17A8MXT2 336 aa12.31□□□□□ -0.44
COTL1-202ENST00000561707 SLC28A1O00337 649 aa12.31□□□□□ -0.44
COTL1-202ENST00000561707 CAPN5O15484 640 aaPredicted RBP12.31□□□□□ -0.44
COTL1-202ENST00000561707 PEX11AO75192 247 aa12.31□□□□□ -0.44
COTL1-202ENST00000561707 LMNAP02545 664 aaKnown RBP12.31□□□□□ -0.44
COTL1-202ENST00000561707 CD59P13987 128 aa12.31□□□□□ -0.44
COTL1-202ENST00000561707 ST6GAL1P15907 406 aa12.31□□□□□ -0.44
COTL1-202ENST00000561707 MAGP20916 626 aa12.31□□□□□ -0.44
COTL1-202ENST00000561707 TGM1P22735 817 aa12.31□□□□□ -0.44
COTL1-202ENST00000561707 CXCR2P25025 360 aa12.31□□□□□ -0.44
COTL1-202ENST00000561707 BCL6P41182 706 aa12.31□□□□□ -0.44
COTL1-202ENST00000561707 NBL1P41271 181 aa12.31□□□□□ -0.44
COTL1-202ENST00000561707 GPR3P46089 330 aa12.31□□□□□ -0.44
COTL1-202ENST00000561707 EPHA4P54764 986 aa12.31□□□□□ -0.44
COTL1-202ENST00000561707 RPS13P62277 151 aaKnown RBP12.31□□□□□ -0.44
COTL1-202ENST00000561707 NR1D2Q14995 579 aa12.31□□□□□ -0.44
COTL1-202ENST00000561707 XKR7Q5GH72 579 aa12.31□□□□□ -0.44
COTL1-202ENST00000561707 PAGE2BQ5JRK9 111 aa12.31□□□□□ -0.44
COTL1-202ENST00000561707 TMEM198Q66K66 360 aa12.31□□□□□ -0.44
COTL1-202ENST00000561707 KLHL35Q6PF15 583 aa12.31□□□□□ -0.44
COTL1-202ENST00000561707 FOXR1Q6PIV2 292 aa12.31□□□□□ -0.44
COTL1-202ENST00000561707 TMIGD1Q6UXZ0 262 aa12.31□□□□□ -0.44
COTL1-202ENST00000561707 ACAD11Q709F0 780 aa12.31□□□□□ -0.44
COTL1-202ENST00000561707 LARP4Q71RC2 724 aaKnown RBP eCLIP12.31□□□□□ -0.44
COTL1-202ENST00000561707 TRIM46Q7Z4K8 759 aa12.31□□□□□ -0.44
COTL1-202ENST00000561707 KRT78Q8N1N4 520 aa12.31□□□□□ -0.44
COTL1-202ENST00000561707 ANKRD53Q8N9V6 530 aa12.31□□□□□ -0.44
COTL1-202ENST00000561707 ACTRT2Q8TDY3 377 aa12.31□□□□□ -0.44
COTL1-202ENST00000561707 TUBGCP3Q96CW5 907 aa12.31□□□□□ -0.44
COTL1-202ENST00000561707 AHCYL2Q96HN2 611 aaKnown RBP12.31□□□□□ -0.44
COTL1-202ENST00000561707 MAELQ96JY0 434 aaKnown RBP12.31□□□□□ -0.44
COTL1-202ENST00000561707 MAGEB10Q96LZ2 347 aaPredicted RBP12.31□□□□□ -0.44
COTL1-202ENST00000561707 TGM7Q96PF1 710 aa12.31□□□□□ -0.44
COTL1-202ENST00000561707 SIKE1Q9BRV8 207 aa12.31□□□□□ -0.44
COTL1-202ENST00000561707 CCDC28BQ9BUN5 200 aa12.31□□□□□ -0.44
COTL1-202ENST00000561707 NT5DC2Q9H857 520 aa12.31□□□□□ -0.44
COTL1-202ENST00000561707 PRM3Q9NNZ6 103 aa12.31□□□□□ -0.44
COTL1-202ENST00000561707 TMEM9Q9P0T7 183 aa12.31□□□□□ -0.44
COTL1-202ENST00000561707 ATXN7L1Q9ULK2 861 aaPredicted RBP12.31□□□□□ -0.44
COTL1-202ENST00000561707 SCN3AQ9NY46 2000 aa12.3□□□□□ -0.44
COTL1-202ENST00000561707 A0A0J9YY10 115 aa12.3□□□□□ -0.44
COTL1-202ENST00000561707 TRBC2A0A5B9 178 aa12.3□□□□□ -0.44
COTL1-202ENST00000561707 OR2A25A4D2G3 310 aa12.3□□□□□ -0.44
COTL1-202ENST00000561707 C4orf47A7E2U8 309 aa12.3□□□□□ -0.44
COTL1-202ENST00000561707 E9PBE3 544 aa12.3□□□□□ -0.44
COTL1-202ENST00000561707 ZW10O43264 779 aa12.3□□□□□ -0.44
COTL1-202ENST00000561707 SH3BP5O60239 455 aa12.3□□□□□ -0.44
COTL1-202ENST00000561707 KLHL41O60662 606 aa12.3□□□□□ -0.44
COTL1-202ENST00000561707 CTSVO60911 334 aa12.3□□□□□ -0.44
COTL1-202ENST00000561707 ETHE1O95571 254 aa12.3□□□□□ -0.44
COTL1-202ENST00000561707 LDOC1O95751 146 aaPredicted RBP12.3□□□□□ -0.44
COTL1-202ENST00000561707 TGFB1P01137 390 aa12.3□□□□□ -0.44
COTL1-202ENST00000561707 CKMT1AP12532 417 aa12.3□□□□□ -0.44
COTL1-202ENST00000561707 CDH3P22223 829 aa12.3□□□□□ -0.44
COTL1-202ENST00000561707 HRH2P25021 359 aa12.3□□□□□ -0.44
COTL1-202ENST00000561707 CAPZBP47756 277 aa12.3□□□□□ -0.44
COTL1-202ENST00000561707 SCTRP47872 440 aa12.3□□□□□ -0.44
COTL1-202ENST00000561707 CYP4F2P78329 520 aa12.3□□□□□ -0.44
COTL1-202ENST00000561707 DAB2P98082 770 aa12.3□□□□□ -0.44
COTL1-202ENST00000561707 CYP4F3Q08477 520 aa12.3□□□□□ -0.44
COTL1-202ENST00000561707 CSRP2Q16527 193 aa12.3□□□□□ -0.44
COTL1-202ENST00000561707 GALNTL6Q49A17 601 aa12.3□□□□□ -0.44
COTL1-202ENST00000561707 SPRED1Q7Z699 444 aa12.3□□□□□ -0.44
COTL1-202ENST00000561707 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.3□□□□□ -0.44
COTL1-202ENST00000561707 MFSD9Q8NBP5 474 aa12.3□□□□□ -0.44
COTL1-202ENST00000561707 IFI44Q8TCB0 444 aa12.3□□□□□ -0.44
COTL1-202ENST00000561707 RHBDD1Q8TEB9 315 aa12.3□□□□□ -0.44
COTL1-202ENST00000561707 ZUFSPQ96AP4 578 aa12.3□□□□□ -0.44
COTL1-202ENST00000561707 CNDP2Q96KP4 475 aaKnown RBP12.3□□□□□ -0.44
COTL1-202ENST00000561707 MARK4Q96L34 752 aa12.3□□□□□ -0.44
COTL1-202ENST00000561707 FCRL4Q96PJ5 515 aa12.3□□□□□ -0.44
COTL1-202ENST00000561707 TRAPPC9Q96Q05 1148 aa12.3□□□□□ -0.44
COTL1-202ENST00000561707 MACROD1Q9BQ69 325 aa12.3□□□□□ -0.44
COTL1-202ENST00000561707 CCDC3Q9BQI4 270 aa12.3□□□□□ -0.44
COTL1-202ENST00000561707 EDEM2Q9BV94 578 aa12.3□□□□□ -0.44
COTL1-202ENST00000561707 ACPTQ9BZG2 426 aa12.3□□□□□ -0.44
COTL1-202ENST00000561707 IRF2BPLQ9H1B7 796 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms