RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 PPP3R2Q96LZ3 170 aa7.26□□□□□ -1.25
TPM1-231ENST00000561395 OR4K3Q96R72 315 aa7.26□□□□□ -1.25
TPM1-231ENST00000561395 CDC6Q99741 560 aa7.26□□□□□ -1.25
TPM1-231ENST00000561395 GPR174Q9BXC1 333 aa7.26□□□□□ -1.25
TPM1-231ENST00000561395 CADM1Q9BY67 442 aaKnown RBP7.26□□□□□ -1.25
TPM1-231ENST00000561395 BRINP2Q9C0B6 783 aa7.26□□□□□ -1.25
TPM1-231ENST00000561395 C1orf21Q9H246 121 aa7.26□□□□□ -1.25
TPM1-231ENST00000561395 TRIT1Q9H3H1 467 aaKnown RBP7.26□□□□□ -1.25
TPM1-231ENST00000561395 OSGEPL1Q9H4B0 414 aa7.26□□□□□ -1.25
TPM1-231ENST00000561395 CARS2Q9HA77 564 aaKnown RBP7.26□□□□□ -1.25
TPM1-231ENST00000561395 CCDC177Q9NQR7 707 aaPredicted RBP7.26□□□□□ -1.25
TPM1-231ENST00000561395 SDR39U1Q9NRG7 319 aaPredicted RBP7.26□□□□□ -1.25
TPM1-231ENST00000561395 INTS7Q9NVH2 962 aaKnown RBP7.26□□□□□ -1.25
TPM1-231ENST00000561395 AIG1Q9NVV5 245 aa7.26□□□□□ -1.25
TPM1-231ENST00000561395 GPRC5BQ9NZH0 403 aa7.26□□□□□ -1.25
TPM1-231ENST00000561395 SPATA7Q9P0W8 599 aa7.26□□□□□ -1.25
TPM1-231ENST00000561395 MOSPD1Q9UJG1 213 aa7.26□□□□□ -1.25
TPM1-231ENST00000561395 ZNF490Q9ULM2 529 aaPredicted RBP7.26□□□□□ -1.25
TPM1-231ENST00000561395 SNX6Q9UNH7 406 aa7.26□□□□□ -1.25
TPM1-231ENST00000561395 DMTF1Q9Y222 760 aa7.26□□□□□ -1.25
TPM1-231ENST00000561395 PLEKHM1Q9Y4G2 1056 aa7.26□□□□□ -1.25
TPM1-231ENST00000561395 CCL27Q9Y4X3 112 aa7.26□□□□□ -1.25
TPM1-231ENST00000561395 LOC100653049A0A140TA62 436 aa7.25□□□□□ -1.25
TPM1-231ENST00000561395 ZNF839A8K0R7 811 aa7.25□□□□□ -1.25
TPM1-231ENST00000561395 E7ENX8 843 aa7.25□□□□□ -1.25
TPM1-231ENST00000561395 CLGNO14967 610 aa7.25□□□□□ -1.25
TPM1-231ENST00000561395 GSC2O15499 205 aa7.25□□□□□ -1.25
TPM1-231ENST00000561395 RRP8O43159 456 aaKnown RBP7.25□□□□□ -1.25
TPM1-231ENST00000561395 RGS14O43566 566 aa7.25□□□□□ -1.25
TPM1-231ENST00000561395 ULK1O75385 1050 aa7.25□□□□□ -1.25
TPM1-231ENST00000561395 RASSF9O75901 435 aa7.25□□□□□ -1.25
TPM1-231ENST00000561395 KRT34O76011 436 aa7.25□□□□□ -1.25
TPM1-231ENST00000561395 WFS1O76024 890 aa7.25□□□□□ -1.25
TPM1-231ENST00000561395 CER1O95813 267 aa7.25□□□□□ -1.25
TPM1-231ENST00000561395 PDYNP01213 254 aa7.25□□□□□ -1.25
TPM1-231ENST00000561395 CDK4P11802 303 aa7.25□□□□□ -1.25
TPM1-231ENST00000561395 EZRP15311 586 aaKnown RBP7.25□□□□□ -1.25
TPM1-231ENST00000561395 GNAZP19086 355 aa7.25□□□□□ -1.25
TPM1-231ENST00000561395 ITGAXP20702 1163 aa7.25□□□□□ -1.25
TPM1-231ENST00000561395 IDSP22304 550 aa7.25□□□□□ -1.25
TPM1-231ENST00000561395 CCND1P24385 295 aa7.25□□□□□ -1.25
TPM1-231ENST00000561395 RPL10P27635 214 aaKnown RBP7.25□□□□□ -1.25
TPM1-231ENST00000561395 HSD17B2P37059 387 aa7.25□□□□□ -1.25
TPM1-231ENST00000561395 HNF4AP41235 474 aa7.25□□□□□ -1.25
TPM1-231ENST00000561395 HALP42357 657 aa7.25□□□□□ -1.25
TPM1-231ENST00000561395 ELF3P78545 371 aaPredicted RBP7.25□□□□□ -1.25
TPM1-231ENST00000561395 MXRA7P84157 204 aa7.25□□□□□ -1.25
TPM1-231ENST00000561395 CTBSQ01459 385 aa7.25□□□□□ -1.25
TPM1-231ENST00000561395 IRF8Q02556 426 aa7.25□□□□□ -1.25
TPM1-231ENST00000561395 TAP2Q03519 686 aa7.25□□□□□ -1.25
TPM1-231ENST00000561395 EMX2Q04743 252 aa7.25□□□□□ -1.25
TPM1-231ENST00000561395 CSTF3Q12996 717 aaKnown RBP7.25□□□□□ -1.25
TPM1-231ENST00000561395 CHIT1Q13231 466 aa7.25□□□□□ -1.25
TPM1-231ENST00000561395 LRP8Q14114 963 aa7.25□□□□□ -1.25
TPM1-231ENST00000561395 DOC2AQ14183 400 aa7.25□□□□□ -1.25
TPM1-231ENST00000561395 ZRSR2Q15696 482 aaKnown RBP7.25□□□□□ -1.25
TPM1-231ENST00000561395 CPSF6Q16630 551 aaKnown RBP eCLIP7.25□□□□□ -1.25
TPM1-231ENST00000561395 ALG11Q2TAA5 492 aa7.25□□□□□ -1.25
TPM1-231ENST00000561395 KIF19Q2TAC6 998 aa7.25□□□□□ -1.25
TPM1-231ENST00000561395 SMU1Q2TAY7 513 aa7.25□□□□□ -1.25
TPM1-231ENST00000561395 PDCD4Q53EL6 469 aaKnown RBP7.25□□□□□ -1.25
TPM1-231ENST00000561395 AGKQ53H12 422 aa7.25□□□□□ -1.25
TPM1-231ENST00000561395 XKR6Q5GH73 641 aa7.25□□□□□ -1.25
TPM1-231ENST00000561395 C6orf136Q5SQH8 315 aa7.25□□□□□ -1.25
TPM1-231ENST00000561395 FRG2Q64ET8 278 aa7.25□□□□□ -1.25
TPM1-231ENST00000561395 DUS1LQ6P1R4 473 aaKnown RBP7.25□□□□□ -1.25
TPM1-231ENST00000561395 Q6ZSR6 202 aa7.25□□□□□ -1.25
TPM1-231ENST00000561395 TBC1D21Q8IYX1 336 aa7.25□□□□□ -1.25
TPM1-231ENST00000561395 FNDC5Q8NAU1 212 aa7.25□□□□□ -1.25
TPM1-231ENST00000561395 OR13H1Q8NG92 308 aa7.25□□□□□ -1.25
TPM1-231ENST00000561395 OR9I1Q8NGQ6 314 aa7.25□□□□□ -1.25
TPM1-231ENST00000561395 BIRC7Q96CA5 298 aa7.25□□□□□ -1.25
TPM1-231ENST00000561395 RCN3Q96D15 328 aa7.25□□□□□ -1.25
TPM1-231ENST00000561395 WDR34Q96EX3 536 aa7.25□□□□□ -1.25
TPM1-231ENST00000561395 C12orf66Q96MD2 445 aa7.25□□□□□ -1.25
TPM1-231ENST00000561395 IL17FQ96PD4 163 aa7.25□□□□□ -1.25
TPM1-231ENST00000561395 FRG2BQ96QU4 278 aa7.25□□□□□ -1.25
TPM1-231ENST00000561395 INSM2Q96T92 566 aaPredicted RBP7.25□□□□□ -1.25
TPM1-231ENST00000561395 HBEGFQ99075 208 aa7.25□□□□□ -1.25
TPM1-231ENST00000561395 ORAI3Q9BRQ5 295 aa7.25□□□□□ -1.25
TPM1-231ENST00000561395 MENTQ9BUN1 341 aa7.25□□□□□ -1.25
TPM1-231ENST00000561395 C1orf50Q9BV19 199 aa7.25□□□□□ -1.25
TPM1-231ENST00000561395 ACPTQ9BZG2 426 aa7.25□□□□□ -1.25
TPM1-231ENST00000561395 MMADHCQ9H3L0 296 aaPredicted RBP7.25□□□□□ -1.25
TPM1-231ENST00000561395 ELOVL6Q9H5J4 265 aa7.25□□□□□ -1.25
TPM1-231ENST00000561395 IL21RQ9HBE5 538 aa7.25□□□□□ -1.25
TPM1-231ENST00000561395 GPR27Q9NS67 375 aa7.25□□□□□ -1.25
TPM1-231ENST00000561395 FARSBQ9NSD9 589 aaKnown RBP7.25□□□□□ -1.25
TPM1-231ENST00000561395 PNMA8BQ9ULN7 279 aaPredicted RBP7.25□□□□□ -1.25
TPM1-231ENST00000561395 PLAGL1Q9UM63 463 aa7.25□□□□□ -1.25
TPM1-231ENST00000561395 WDR37Q9Y2I8 494 aa7.25□□□□□ -1.25
TPM1-231ENST00000561395 TDRKHQ9Y2W6 561 aaKnown RBP7.25□□□□□ -1.25
TPM1-231ENST00000561395 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.25□□□□□ -1.25
TPM1-231ENST00000561395 DYRK1BQ9Y463 629 aa7.25□□□□□ -1.25
TPM1-231ENST00000561395 GPR45Q9Y5Y3 372 aa7.25□□□□□ -1.25
TPM1-231ENST00000561395 CFAP20Q9Y6A4 193 aaKnown RBP7.25□□□□□ -1.25
TPM1-231ENST00000561395 KCNE2Q9Y6J6 123 aa7.25□□□□□ -1.25
TPM1-231ENST00000561395 A0A1W2PPC4 97 aa7.24□□□□□ -1.25
TPM1-231ENST00000561395 PDZK1P1A8MUH7 402 aa7.24□□□□□ -1.25
TPM1-231ENST00000561395 NPIPB8E9PQR5 432 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms