RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 DNAAF3Q8N9W5 541 aa18.65■□□□□ 0.58
RABGGTA-214ENST00000560163 TMEM178AQ8NBL3 297 aa18.65■□□□□ 0.58
RABGGTA-214ENST00000560163 CXXC4Q9H2H0 198 aa18.65■□□□□ 0.58
RABGGTA-214ENST00000560163 MRPS30Q9NP92 439 aaKnown RBP18.65■□□□□ 0.58
RABGGTA-214ENST00000560163 PPT2Q9UMR5 302 aa18.65■□□□□ 0.58
RABGGTA-214ENST00000560163 HRH3Q9Y5N1 445 aa18.65■□□□□ 0.58
RABGGTA-214ENST00000560163 PRRC2AP48634 2157 aaKnown RBP18.65■□□□□ 0.58
RABGGTA-214ENST00000560163 SOWAHDA6NJG2 315 aa18.64■□□□□ 0.57
RABGGTA-214ENST00000560163 PRRG2O14669 202 aa18.64■□□□□ 0.57
RABGGTA-214ENST00000560163 P2RX6O15547 441 aa18.64■□□□□ 0.57
RABGGTA-214ENST00000560163 TJP3O95049 919 aa18.64■□□□□ 0.57
RABGGTA-214ENST00000560163 MATN4O95460 622 aa18.64■□□□□ 0.57
RABGGTA-214ENST00000560163 DNAJA1P31689 397 aaKnown RBP18.64■□□□□ 0.57
RABGGTA-214ENST00000560163 PPARGP37231 505 aaPredicted RBP18.64■□□□□ 0.57
RABGGTA-214ENST00000560163 MAGEA1P43355 309 aa18.64■□□□□ 0.57
RABGGTA-214ENST00000560163 CDH17Q12864 832 aa18.64■□□□□ 0.57
RABGGTA-214ENST00000560163 P3H1Q32P28 736 aa18.64■□□□□ 0.57
RABGGTA-214ENST00000560163 MARVELD2Q8N4S9 558 aa18.64■□□□□ 0.57
RABGGTA-214ENST00000560163 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.64■□□□□ 0.57
RABGGTA-214ENST00000560163 OR6P1Q8NGX9 317 aa18.64■□□□□ 0.57
RABGGTA-214ENST00000560163 M1APQ8TC57 530 aa18.64■□□□□ 0.57
RABGGTA-214ENST00000560163 KCNK13Q9HB14 408 aa18.64■□□□□ 0.57
RABGGTA-214ENST00000560163 MMP25Q9NPA2 562 aa18.64■□□□□ 0.57
RABGGTA-214ENST00000560163 COQ3Q9NZJ6 369 aa18.64■□□□□ 0.57
RABGGTA-214ENST00000560163 MARCH4Q9P2E8 410 aaPredicted RBP18.64■□□□□ 0.57
RABGGTA-214ENST00000560163 OR2W5A6NFC9 320 aa18.63■□□□□ 0.57
RABGGTA-214ENST00000560163 TXNDC9O14530 226 aa18.63■□□□□ 0.57
RABGGTA-214ENST00000560163 TPM3P06753 285 aa18.63■□□□□ 0.57
RABGGTA-214ENST00000560163 ADRA1DP25100 572 aa18.63■□□□□ 0.57
RABGGTA-214ENST00000560163 IST1P53990 364 aa18.63■□□□□ 0.57
RABGGTA-214ENST00000560163 PRDX1Q06830 199 aaKnown RBP18.63■□□□□ 0.57
RABGGTA-214ENST00000560163 SLC25A25Q6KCM7 469 aa18.63■□□□□ 0.57
RABGGTA-214ENST00000560163 SUSD1Q6UWL2 747 aa18.63■□□□□ 0.57
RABGGTA-214ENST00000560163 ANKRD37Q7Z713 158 aa18.63■□□□□ 0.57
RABGGTA-214ENST00000560163 DMRTC2Q8IXT2 367 aaPredicted RBP18.63■□□□□ 0.57
RABGGTA-214ENST00000560163 EID3Q8N140 333 aa18.63■□□□□ 0.57
RABGGTA-214ENST00000560163 GSDMBQ8TAX9 411 aa18.63■□□□□ 0.57
RABGGTA-214ENST00000560163 MAGEC3Q8TD91 643 aa18.63■□□□□ 0.57
RABGGTA-214ENST00000560163 MRFAP1L1Q96HT8 127 aa18.63■□□□□ 0.57
RABGGTA-214ENST00000560163 PANX3Q96QZ0 392 aa18.63■□□□□ 0.57
RABGGTA-214ENST00000560163 SYCE3A1L190 88 aa18.62■□□□□ 0.57
RABGGTA-214ENST00000560163 GABRR3A8MPY1 467 aa18.62■□□□□ 0.57
RABGGTA-214ENST00000560163 FOXO6A8MYZ6 492 aa18.62■□□□□ 0.57
RABGGTA-214ENST00000560163 H0YIG0 161 aa18.62■□□□□ 0.57
RABGGTA-214ENST00000560163 KPNA5O15131 536 aa18.62■□□□□ 0.57
RABGGTA-214ENST00000560163 SUN1O94901 812 aa18.62■□□□□ 0.57
RABGGTA-214ENST00000560163 PKMP14618 531 aaKnown RBP18.62■□□□□ 0.57
RABGGTA-214ENST00000560163 EZRP15311 586 aaKnown RBP18.62■□□□□ 0.57
RABGGTA-214ENST00000560163 GRIA1P42261 906 aa18.62■□□□□ 0.57
RABGGTA-214ENST00000560163 GBX1Q14549 363 aa18.62■□□□□ 0.57
RABGGTA-214ENST00000560163 EXT1Q16394 746 aa18.62■□□□□ 0.57
RABGGTA-214ENST00000560163 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.62■□□□□ 0.57
RABGGTA-214ENST00000560163 PTRHD1Q6GMV3 140 aaKnown RBP18.62■□□□□ 0.57
RABGGTA-214ENST00000560163 ZNF227Q86WZ6 799 aa18.62■□□□□ 0.57
RABGGTA-214ENST00000560163 TGIF2LYQ8IUE0 185 aa18.62■□□□□ 0.57
RABGGTA-214ENST00000560163 VSTM4Q8IW00 320 aa18.62■□□□□ 0.57
RABGGTA-214ENST00000560163 TAB3Q8N5C8 712 aaPredicted RBP18.62■□□□□ 0.57
RABGGTA-214ENST00000560163 OR9A1PQ8NGU1 263 aa18.62■□□□□ 0.57
RABGGTA-214ENST00000560163 OR9A4Q8NGU2 314 aa18.62■□□□□ 0.57
RABGGTA-214ENST00000560163 LILRB4Q8NHJ6 448 aa18.62■□□□□ 0.57
RABGGTA-214ENST00000560163 SKA2Q8WVK7 121 aaPredicted RBP18.62■□□□□ 0.57
RABGGTA-214ENST00000560163 SMPDL3AQ92484 453 aa18.62■□□□□ 0.57
RABGGTA-214ENST00000560163 ALG3Q92685 438 aa18.62■□□□□ 0.57
RABGGTA-214ENST00000560163 NRGNQ92686 78 aa18.62■□□□□ 0.57
RABGGTA-214ENST00000560163 PEX13Q92968 403 aa18.62■□□□□ 0.57
RABGGTA-214ENST00000560163 RERGQ96A58 199 aaPredicted RBP18.62■□□□□ 0.57
RABGGTA-214ENST00000560163 OLFM1Q99784 485 aa18.62■□□□□ 0.57
RABGGTA-214ENST00000560163 C19orf25Q9UFG5 118 aaPredicted RBP18.62■□□□□ 0.57
RABGGTA-214ENST00000560163 INTS1Q8N201 2190 aaKnown RBP18.62■□□□□ 0.57
RABGGTA-214ENST00000560163 ERI2A8K979 691 aaKnown RBP18.61■□□□□ 0.57
RABGGTA-214ENST00000560163 TOXO94900 526 aa18.61■□□□□ 0.57
RABGGTA-214ENST00000560163 TTPAP49638 278 aa18.61■□□□□ 0.57
RABGGTA-214ENST00000560163 PTK6Q13882 451 aa18.61■□□□□ 0.57
RABGGTA-214ENST00000560163 AARS2Q5JTZ9 985 aaKnown RBP18.61■□□□□ 0.57
RABGGTA-214ENST00000560163 ZNF468Q5VIY5 522 aaPredicted RBP18.61■□□□□ 0.57
RABGGTA-214ENST00000560163 ICE2Q659A1 982 aa18.61■□□□□ 0.57
RABGGTA-214ENST00000560163 OTOAQ7RTW8 1153 aa18.61■□□□□ 0.57
RABGGTA-214ENST00000560163 PRSS41Q7RTY9 318 aa18.61■□□□□ 0.57
RABGGTA-214ENST00000560163 PCGF5Q86SE9 256 aa18.61■□□□□ 0.57
RABGGTA-214ENST00000560163 HORMAD2Q8N7B1 307 aa18.61■□□□□ 0.57
RABGGTA-214ENST00000560163 FAM98AQ8NCA5 519 aaKnown RBP18.61■□□□□ 0.57
RABGGTA-214ENST00000560163 FAM57AQ8TBR7 257 aa18.61■□□□□ 0.57
RABGGTA-214ENST00000560163 FOPNLQ96NB1 174 aa18.61■□□□□ 0.57
RABGGTA-214ENST00000560163 FOXC2Q99958 501 aa18.61■□□□□ 0.57
RABGGTA-214ENST00000560163 LRFN1Q9P244 771 aa18.61■□□□□ 0.57
RABGGTA-214ENST00000560163 A0A1B0GTL3 188 aa18.6■□□□□ 0.57
RABGGTA-214ENST00000560163 MYO1CO00159 1063 aa18.6■□□□□ 0.57
RABGGTA-214ENST00000560163 CDK2AP1O14519 115 aa18.6■□□□□ 0.57
RABGGTA-214ENST00000560163 NME2P1O60361 137 aa18.6■□□□□ 0.57
RABGGTA-214ENST00000560163 FAM155BO75949 473 aa18.6■□□□□ 0.57
RABGGTA-214ENST00000560163 NSA2O95478 260 aaKnown RBP18.6■□□□□ 0.57
RABGGTA-214ENST00000560163 ZNF24P17028 368 aa18.6■□□□□ 0.57
RABGGTA-214ENST00000560163 NME2P22392 152 aa18.6■□□□□ 0.57
RABGGTA-214ENST00000560163 RPS3P23396 243 aaKnown RBP eCLIP18.6■□□□□ 0.57
RABGGTA-214ENST00000560163 MSX1P28360 303 aa18.6■□□□□ 0.57
RABGGTA-214ENST00000560163 PTGER1P34995 402 aa18.6■□□□□ 0.57
RABGGTA-214ENST00000560163 RPA3P35244 121 aaPredicted RBP18.6■□□□□ 0.57
RABGGTA-214ENST00000560163 AVPR1BP47901 424 aa18.6■□□□□ 0.57
RABGGTA-214ENST00000560163 AGTR2P50052 363 aa18.6■□□□□ 0.57
RABGGTA-214ENST00000560163 RWDD2BP57060 319 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms